G124834


Basic Information

Item Value
gene id G124834
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 17834219 ~ 17836226 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU167881
ctactactactactacagacCATACTCTATCTGAATGACTTAATTTTTCTATATATACACCAATTGTTGGTTTGGTAATGTCTTGTTCTTGTGGGCTTTGTCCAACTACCCGCAGTGCAGGTTAGACAGaaaacattaataaatatttagCTAAAGCATGAATTTGTTTACTTTGGTAAATGTATAGCATTTCATCTCACACCGCATGCAAATATAAATAAGGAAAACTTCCTAAACCacacaatttaaataaaatgtgttttggagAATTCAGCACAGCATACCTTATCGATTCCCTCTAAAATCTCCACAGTGGATGGTTTGGCCTGTAAGGCAAACATTTTGTAaggcaaacattttaaaaatccaagttatagagaaaaaaagacatttgccATAACAACAGTGGTTTGTGCAAGCAACTTCTTTAAAAAGGATCTGTCAACTTCCTGTTTCATCTTCCCATTTCTGCACATTCGTCATGTGTGTCTTCTTCCGTTGTTGGCGGCATTATTTAGTTAGCCTGTGCATGCCAATATTCCAACGAATGGTGATGCCAGGAGGAGTTTTAACATAAACATCTGAATTGTGATAATTTATGTAGATCTACCCAAGCATGTGACCACTATGTGTGCTTAAAGGTGTGATTTGTGAAAAGTCTTACATGTGCTTGCAAACTGAAAGCTTATCTGTTCAATGTGAAGAAGTACATGATTTGTACAGCAGCATGAAGTAGAAAGACATAATCAGTAAACAAACCCTCCACCGTGAGATGACAGCCCCCATGTTGATGAGGGATTGTAGGATATTTTGTTACTGGGACCCTCCTCTGATATTCTCTCACAGATAACTTCTCCACTTGTCAAGTGAAGTTGTGCAAGGGACTTTCGACAGTCTGTGGCAGGACTGCAGTCCTCCTGTCCTCTTTAGACGGAGGGTGTGTGAGCCAAGATGTGGGAGGGTCCGCCAGAAGAGCAGCATGGAACATGAGCACTGCTGGGCCTTCACGGGAATCTGGTCTGTGTCTAGTAAGGCCCACTAAATATTAATTTCAGTGGTGGGAGTTCTCATGCAAATCTGGTAGCATTATAGGTAAAGAAAACAGTGAATTGCACACAGTGTCAGCGTCGTAAACTTTTGTTATGTCTGATACTGTTCTTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167881 True 1163 lncRNA 0.40 2 17834219 17836226

Neighbor

gene id symbol gene type direction distance location
scrn3 scrn3,LOC102796247 coding upstream 185967 17643338 ~ 17648252 (+)
sp9 sp9 coding upstream 199280 17632728 ~ 17634939 (+)
cdca7a cdca7 coding upstream 301963 17527950 ~ 17532256 (+)
zak LOC104965553 coding upstream 307515 17501695 ~ 17526704 (+)
rapgef4a rapgef4,LOC101483582 coding upstream 336135 17465228 ~ 17498084 (+)
hoxd12a hoxd12 coding downstream 31636 17867862 ~ 17870159 (+)
hoxd11a hoxd11 coding downstream 37456 17873682 ~ 17878153 (+)
hoxd9a hoxd9,LOC100697606,LOC102311238,LOC101477388,LOC102193136,LOC102792463 coding downstream 46240 17882466 ~ 17884616 (+)
hoxd4a hoxd4 coding downstream 59786 17896012 ~ 17899698 (+)
hoxd3a hoxd3 coding downstream 64853 17901079 ~ 17909596 (+)
G124819 NA non-coding upstream 97233 17736110 ~ 17736986 (+)
G124816 atp5g3,LOC102234286 non-coding upstream 100968 17730056 ~ 17733251 (+)
G124804 NA non-coding upstream 146405 17687571 ~ 17687814 (+)
G124797 chn1,LOC102233772 non-coding upstream 159764 17672255 ~ 17674455 (+)
G124794 chrna1 non-coding upstream 168144 17664672 ~ 17666075 (+)
G124841 hoxd12,hoxd10,LOC108239741,LOC107579206 non-coding downstream 24527 17860753 ~ 17881505 (+)
G124895 NA non-coding downstream 252999 18089225 ~ 18089543 (+)
G124901 NA non-coding downstream 293025 18129251 ~ 18182236 (+)
G124914 adam23 non-coding downstream 351192 18187418 ~ 18188518 (+)
G124915 NA non-coding downstream 352614 18188840 ~ 18189132 (+)
myo3b myo3b other upstream 635629 17127881 ~ 17198590 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other upstream 810659 16988071 ~ 17023560 (+)
dap1b dapl1 other upstream 1732577 16099271 ~ 16101642 (+)
LOC120570321 NA other upstream 1856345 15970982 ~ 15977874 (+)
galnt13 galnt13,LOC102796746 other upstream 2173205 15618514 ~ 15661014 (+)
hoxd10a hoxd10,LOC102792757 other downstream 23934 17860160 ~ 17881328 (+)
hnrnpa3 hnrnpa3 other downstream 174531 18010757 ~ 18017413 (+)
G125079 NA other downstream 866802 18703028 ~ 18704528 (+)
LOC120570507 NA other downstream 982527 18818753 ~ 18827547 (+)
tmsb4x NA other downstream 1253192 19089418 ~ 19090785 (+)

Expression


Co-expression Network