G125504


Basic Information

Item Value
gene id G125504
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20024263 ~ 20027981 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU168817
gtatttattttcatcagAACACAATTTTAATCATTGTAGCAGTAGTTTTCATACTTTTTGAAAAGATCATGACTTGTGAGACtgtttttataaatcatttCATCAAAGTtgtttgtaaaaaaattaaagaagtTACTTGAACTAAAGCATCTATAATATTACAATATACTGGTAGTATAATAGtaatcataataatcataatcGCAATGATACTTCTATATGACTTTGAACCTTTTTCATTTCTATAATCATAAATCTTTcgctttcacacacacagaaccacaaCCTTTCACAATAAGGTTGCGAAGCTGAGGACGAGTCTATAGGTTAAACGTCACCACATTCTCTTTAAACATCAATGATTTCAGacgctcaaaaaaaaaaaagaattagaagaagaagaagaagaaagtaaCAGCATGACATCAACTTAAAATACACAAGAAAACCTGAATGCAAAGACATACATTGTTCAGCATACTAGGGAACATATTTACAACCAAAAAAGGAATGGGCTTCTGCATAGATCCACAGGATAGAGAACGGAACTATTGGGAAAACAGAGAGAGGCTgagagggagtgaaagaggGCAATATTTGTGTACATACCATTTGGTGGTGAGTGAACATGGGGGGTTAGTGGCAATAGGCATACATAGTCTACGTATATGTGCAggggaaaaacacaaaatgtatttttgtaggTTGGTGTTATGGAAAATGACAGACCATACCCTACGACTGCTACAGACCATTGTTAGGGATCTAGTCTGAATCTATAGGACCCTAGACAATTTCTTCTCAGTATATTGcagtaaaaagtgacaaaccaaaacacacaacagataAAATGATCACAGCGGAGTAACTGTTGCGTGCATGCCTGCATTACAAACGGAAGTCAAATCAGAGACTTACATCAGTCAAATCTAATTCTATTAATGTCTGGAAGAAACCTTGCACACAAGGTTCATCCTTGGTGCTAAGATATCTGAAGTGGCATGAAGGCCAATACATATGCACAGCATTCCCAGCCATGCAACCAGCGTGAGGATGGTATGAATTCAGGTCCATCAGTTGGTTTGTGATGGCTGTTACATCACAGCATGAATTGCTGACATGGTAGGCAGAATGAAATCACATGTATGTATTGAAGAGATCCCTTACTGTACATCTGTTTGGGTTGTGTGAGGCTTATGAGATGCAATCTATCGATTGCTAACATGGCACATTTCTCTGACACTGACAGACCCTGTTTTCCTCCTGTTGTCCATTATGTTTGATCATGAAAAGCAGCGTGTGATGTCAGATTGGAATTGACTTTATATTTTACTGAATATAAGGTATGCTTTGGCACCAGTTTAAGGTCATTGTCCACTTCATTCCCCTGCCCTTCTCTGCACTCATTTTTCAGTTCAGACCAAGGTTGGGGGTTCTTCTATTAGGCAAGtgcaggggaaaaaaatagATCTACCCCTACCCTAGTCTGTTTTGGGTCTTGGGGCATTGACacagttacatattgtacagtACAATGGTTTCATACTACAGTCCATGCAGCTTTAGGGCTGCAGTGAATGAGACAACTAATGTAGCAGGTCCCTGTGGGTCTAAAGACAATGCTGGTTTGCCACACCTGTCCTGCAGGCCCTTTCTgtatttgcacacacacacacacatacacacacacacacacacatatgcatgcacgcacacacacacatatgcatgcatgcacgcacacacgcacgcatgcatgcacacacacgcacgcacgcacgcacgcacgcacgcacaatcACTTTTTCCTCCAGCGCTCGGCCTTCCTGATTCCTGTGTATGACACTCCTCATGTGATGACAGTCTTTGTGTGATGACAGTCCTTGTGTGATGACAGTCCTTGTGTGAAAAGtctttagcagcagcagcagcagcagcaatataaaagaataaaaatatcTCCATCTACTGGTAACCAATAGAATAGCAGCATTTTTCTGTTACTGACTGCAGCCATCCAAGATGGGCATGGGTGTGCTGTTCTGAATGAGTTCCTTTTAATGTATTTCATGCAAGCAGTAATGGTAAGGTCTAGCGGGGGCAGGGTCTAAACTGAATATATGTCAAAATAAGCCAATATACTGGTTGTATATGAATaatgatgtattttaaattctCATATAAGCTGTATAATAAAATTCTTGACATCAAATTGGACATCTCATTTAAGAAATCAGAGAGTGGAAAAGAATGCATTCAACAACATTTTATCTTTAAATACCTGATCTCACAGCCTTGTTCATCGAAGAGACAAAACAAAATTGAGAAACTAAAGAAGAAGTCAGCCCTTGAGGTCATACCATTCCTCTGACATTCCAAGTGTCAGCTGACTTGGACGATTATCAGGTTATGCCATTAGTGCTAACTCAAACAGTGACATGCTCCTCTCTCTGGATTTGTTTCTGTACCTGCTCTCCGGCAACAGCCAGTGGAATGCCTCTGCACTACAGGTATACCAGTTTAAAAAGAAACAGGAAGTGAGCCAAGTTTTACCCTTTGTCTTCTAACAATTTTGCATGTGCATGTGATTATgatgtttgtactgtatatcttaATAAGCCCTTTACTTAATGAAACATTAGTTTGATGTTTTGAGGAGAAAAGTAGAGGACAGTGGGCATGCTACAGGAGCTGATTTGGGATCAGATGTGGAGTGCGGAGTGGGGCTGAGGACAATCAACATAAGAGACATAACATTGCAAAGAGCCTCCACATGCAGTTCATGAAAATCGATTACACGTTTGGATTCAACAGAaacaaactgttgatgatatGTAGAGTATCATTCTATACGTACTGTATGGCCAGGGAATGGGGTAGTATAATATATCTACTGTATTAGTAGACTGGGGATTTTCCTTTATGCTACTGCAAGTAGCATGTTACATTTCTAGTgagactttgacattttatcttCATAATAACTGCATGAGACTTACAGTTGactcattataaaaaaaaaagttcttaaaGGTAATATCCAGTCATCATGTTTCTTATAAATAAAAAGGCCTGAGGTTAAAATGACACCACTGATATACGTAGATGTCAGTTTTGTTTCGTAAATTGAGTTTTTGTTTGAGTGATGATATAATAAAATTATTAGTACTTGAACTGCTGGTCACCAGCAGGGAGAAGGAAAAGAACCAAGGGTCTTGAGGCAGAAGAGAACAAGGAGCCTTCAGTCCCCATTGTTTTTAGTTGTTGTGGACATTATTTTGACTGGATAGTAcctttaaaattttaaaactaaaataacaaaagCTTCTTCGTCTGGAACAACAACGAATATTAAATATTGATCCGGTGCTATAATCTTGATGTTGGTTAACTTTGCTGAGCAATGTTGCTGATAAGTGGCCACAATCTGAATGAGGTTTTTGTAAAATGCCTGAAATAACATCTTCGGTTAAGACAAGCTTGacagttttatgttttgttttatgagATAAAATCctatctgtgttgtttttgtttgctgTGTATTAGTTGAACAACTCTTTAAACTCTTTAAAAAGTCAACAATAAAAGATCTATAGCAAAATATTCATGTTATATTCTGGAAATTTAA
>TU168818
gtatttattttcatcagAACACAATTTTAATCATTGTAGCAGTAGTTTTCATACTTTTTGAAAAGATCATGACTTGTGAGACtgtttttataaatcatttCATCAAAGTtgtttgtaaaaaaattaaagaagtTACTTGAACTAAAGCATCTATAATATTACAATATACTGGTAGTATAATAGtaatcataataatcataatcGCAATGATACTTCTATATGACTTTGAACCTTTTTCATTTCTATAATCATAAATCTTTcgctttcacacacacagaaccacaaCCTTTCACAATAAGGTTGCGAAGCTGAGGACGAGTCTATAGGTTAAACGTCACCACATTCTCTTTAAACATCAATGATTTCAGacgctcaaaaaaaaaaaagaattagaagaagaagaagaagaaagtaaCAGCATGACATCAACTTAAAATACACAAGAAAACCTGAATGCAAAGACATACATTGTTCAGCATACTAGGGAACATATTTACAACCAAAAAAGGAATGGGCTTCTGCATAGATCCACAGGATAGAGAACGGAACTATTGGGAAAACAGAGAGAGGCTgagagggagtgaaagaggGCAATATTTGTGTACATACCATTTGGTGGTGAGTGAACATGGGGGGTTAGTGGCAATAGGCATACATAGTCTACGTATATGTGCAggggaaaaacacaaaatgtatttttgtaggTTGGTGTTATGGAAAATGACAGACCATACCCTACGACTGCTACAGACCATTGTTAGGGATCTAGTCTGAATCTATAGGACCCTAGACAATTTCTTCTCAGTATATTGcagtaaaaagtgacaaaccaaaacacacaacagataAAATGATCACAGCGGAGTAACTGTTGCGTGCATGCCTGCATTACAAACGGAAGTCAAATCAGAGACTTACATCAGTCAAATCTAATTCTATTAATGTCTGGAAGAAACCTTGCACACAAGGTTCATCCTTGGTGCTAAGATATCTGAAGTGGCATGAAGGCCAATACATATGCACAGCATTCCCAGCCATGCAACCAGCGTGAGGATGGTATGAATTCAGGTCCATCAGTTGGTTTGTGATGGCTGTTACATCACAGCATGAATTGCTGACATGGTAGGCAGAATGAAATCACATGTATGTATTGAAGAGATCCCTTACTGTACATCTGTTTGGGTTGTGTGAGGCTTATGAGATGCAATCTATCGATTGCTAACATGGCACATTTCTCTGACACTGACAGACCCTGTTTTCCTCCTGTTGTCCATTATGTTTGATCATGAAAAGCAGCGTGTGATGTCAGATTGGAATTGACTTTATATTTTACTGAATATAAGGTATGCTTTGGCACCAGTTTAAGGTCATTGTCCACTTCATTCCCCTGCCCTTCTCTGCACTCATTTTTCAGTTCAGACCAAGGTTGGGGGTTCTTCTATTAGGCAAGtgcaggggaaaaaaatagATCTACCCCTACCCTAGTCTGTTTTGGGTCTTGGGGCATTGACacagttacatattgtacagtACAATGGTTTCATACTACAGTCCATGCAGCTTTAGGGCTGCAGTGAATGAGACAACTAATGTAGCAGGTCCCTGTGGGTCTAAAGACAATGCTGGTTTGCCACACCTGTCCTGCAGGCCCTTTCTgtatttgcacacacacacacacatacacacacacacacacacatatgcatgcacgcacacacacacatatgcatgcatgcacgcacacacgcacgcatgcatgcacacacacgcacacacgcacgcacgcacgcacgcacgcacgcacaatcACTTTTTCCTCCAGCGCTCGGCCTTCCTGATTCCTGTGTATGACACTCCTCATGTGATGACAGTCTTTGTGTGATGACAGTCCTTGTGTGATGACAGTCCTTGTGTGAAAAGtctttagcagcagcagcagcagcagcaatataaaagaataaaaatatcTCCATCTACTGGTAACCAATAGAATAGCAGCATTTTTCTGTTACTGACTGCAGCCATCCAAGATGGGCATGGGTGTGCTGTTCTGAATGAGTTCCTTTTAATGTATTTCATGCAAGCAGTAATGGTAAGGTCTAGCGGGGGCAGGGTCTAAACTGAATATATGTCAAAATAAGCCAATATACTGGTTGTATATGAATaatgatgtattttaaattctCATATAAGCTGTATAATAAAATTCTTGACATCAAATTGGACATCTCATTTAAGAAATCAGAGAGTGGAAAAGAATGCATTCAACAACATTTTATCTTTAAATACCTGATCTCACAGCCTTGTTCATCGAAGAGACAAAACAAAATTGAGAAACTAAAGAAGAAGTCAGCCCTTGAGGTCATACCATTCCTCTGACATTCCAAGTGTCAGCTGACTTGGACGATTATCAGGTTATGCCATTAGTGCTAACTCAAACAGTGACATGCTCCTCTCTCTGGATTTGTTTCTGTACCTGCTCTCCGGCAACAGCCAGTGGAATGCCTCTGCACTACAGGTATACCAGTTTAAAAAGAAACAGGAAGTGAGCCAAGTTTTACCCTTTGTCTTCTAACAATTTTGCATGTGCATGTGATTATgatgtttgtactgtatatcttaATAAGCCCTTTACTTAATGAAACATTAGTTTGATGTTTTGAGGAGAAAAGTAGAGGACAGTGGGCATGCTACAGGAGCTGATTTGGGATCAGATGTGGAGTGCGGAGTGGGGCTGAGGACAATCAACATAAGAGACATAACATTGCAAAGAGCCTCCACATGCAGTTCATGAAAATCGATTACACGTTTGGATTCAACAGAaacaaactgttgatgatatGTAGAGTATCATTCTATACGTACTGTATGGCCAGGGAATGGGGTAGTATAATATATCTACTGTATTAGTAGACTGGGGATTTTCCTTTATGCTACTGCAAGTAGCATGTTACATTTCTAGTgagactttgacattttatcttCATAATAACTGCATGAGACTTACAGTTGactcattataaaaaaaaaagttcttaaaGGTAATATCCAGTCATCATGTTTCTTATAAATAAAAAGGCCTGAGGTTAAAATGACACCACTGATATACGTAGATGTCAGTTTTGTTTCGTAAATTGAGTTTTTGTTTGAGTGATGATATAATAAAATTATTAGTACTTGAACTGCTGGTCACCAGCAGGGAGAAGGAAAAGAACCAAGGGTCTTGAGGCAGAAGAGAACAAGGAGCCTTCAGTCCCCATTGTTTTTAGTTGTTGTGGACATTATTTTGACTGGATAGTAcctttaaaattttaaaactaaaataacaaaagCTTCTTCGTCTGGAACAACAACGAATATTAAATATTGATCCGGTGCTATAATCTTGATGTTGGTTAACTTTGCTGAGCAATGTTGCTGATAAGTGGCCACAATCTGAATGAGGTTTTTGTAAAATGCCTGAAATAACATCTTCGGTTAAGACAAGCTTGacagttttatgttttgttttatgagATAAAATCctatctgtgttgtttttgtttgctgTGTATTAGTTGAACAACTCTTTAAACTCTTTAAAAAGTCAACAATAAAAGATCTATAGCAAAATATTCATGTTATATTCTGGAAATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168817 False 3631 lncRNA 0.38 2 20024263 20027981
TU168818 True 3639 lncRNA 0.38 2 20024263 20027981

Neighbor

gene id symbol gene type direction distance location
si:ch73-390b10.2 LOC102224404,LOC103392127,LOC106959393,LOC103369897,LOC103459619,LOC107099852,LOC100701210 coding upstream 71065 19944868 ~ 19953198 (+)
si:ch211-214p13.8 NA coding upstream 95317 19924998 ~ 19928946 (+)
si:ch211-214p13.9 NA coding upstream 103843 19916092 ~ 19920420 (+)
gsk3ba gsk3b coding upstream 126975 19853302 ~ 19897288 (+)
LOC120569649 LOC104952805 coding upstream 179321 19842231 ~ 19844942 (+)
abhd13 abhd13 coding downstream 109323 20137304 ~ 20142499 (+)
tnfsf13b NA coding downstream 117102 20145083 ~ 20149050 (+)
col4a2 col4a2,LOC107557913 coding downstream 361537 20389518 ~ 20471524 (+)
naxd naxd,LOC102782328 coding downstream 450730 20478711 ~ 20485061 (+)
ing1 ing1 coding downstream 457245 20485226 ~ 20490509 (+)
G125501 NA non-coding upstream 8009 20016021 ~ 20016254 (+)
G125482 NA non-coding upstream 81416 19942230 ~ 19942847 (+)
G125480 NA non-coding upstream 87015 19930932 ~ 19937248 (+)
G125465 NA non-coding upstream 116441 19907587 ~ 19907822 (+)
G125397 NA non-coding upstream 124826 19899234 ~ 19899437 (+)
G125547 NA non-coding downstream 200747 20228728 ~ 20269128 (+)
G125577 NA non-coding downstream 302406 20330387 ~ 20330659 (+)
G125626 NA non-coding downstream 463680 20491661 ~ 20492159 (+)
G125662 NA non-coding downstream 566059 20594040 ~ 20631194 (+)
G125668 NA non-coding downstream 575710 20603691 ~ 20611664 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other upstream 30939 19968360 ~ 19993324 (+)
igsf3 LOC103352919,LOC104967650 other upstream 564989 19388015 ~ 19459274 (+)
tmsb4x NA other upstream 933478 19089418 ~ 19090785 (+)
LOC120570507 NA other upstream 1196716 18818753 ~ 18827547 (+)
G125079 NA other upstream 1319735 18703028 ~ 18704528 (+)
myo16 myo16,LOC103372229 other downstream 125874 20153855 ~ 20265590 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other downstream 464197 20492178 ~ 20521274 (+)
mpc2b mpc2 other downstream 825108 20853089 ~ 20858916 (+)
G125757 rpl24 other downstream 832171 20860152 ~ 20865442 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other downstream 1591367 21619348 ~ 21634757 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1792448 NA non-coding NC_048586.1 CM023240.2 25011600 ~ 25013698 (-)