G125577


Basic Information

Item Value
gene id G125577
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20330387 ~ 20330659 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU168897
gtcccgacggtacccgacgggccgggccgggttcggacagatatttagaaagtATGGTCGGGGTCAGctcgataaggcatttgttgtaaaatggtgctgcggctcctgagagctcagtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtaagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168897 True 273 lncRNA 0.53 1 20330387 20330659

Neighbor

gene id symbol gene type direction distance location
tnfsf13b NA coding upstream 181337 20145083 ~ 20149050 (+)
abhd13 abhd13 coding upstream 187888 20137304 ~ 20142499 (+)
si:ch73-390b10.2 LOC102224404,LOC103392127,LOC106959393,LOC103369897,LOC103459619,LOC107099852,LOC100701210 coding upstream 377189 19944868 ~ 19953198 (+)
si:ch211-214p13.8 NA coding upstream 401441 19924998 ~ 19928946 (+)
si:ch211-214p13.9 NA coding upstream 409967 19916092 ~ 19920420 (+)
col4a2 col4a2,LOC107557913 coding downstream 58859 20389518 ~ 20471524 (+)
naxd naxd,LOC102782328 coding downstream 148052 20478711 ~ 20485061 (+)
ing1 ing1 coding downstream 154567 20485226 ~ 20490509 (+)
sik1 LOC103352856,LOC102193135,LOC102291704,LOC101480385 coding downstream 213718 20544377 ~ 20554354 (+)
gabpa gabpa coding downstream 310553 20641212 ~ 20649166 (+)
G125547 NA non-coding upstream 61259 20228728 ~ 20269128 (+)
G125504 NA non-coding upstream 302406 20024263 ~ 20027981 (+)
G125501 NA non-coding upstream 314133 20016021 ~ 20016254 (+)
G125482 NA non-coding upstream 387540 19942230 ~ 19942847 (+)
G125480 NA non-coding upstream 393139 19930932 ~ 19937248 (+)
G125626 NA non-coding downstream 161002 20491661 ~ 20492159 (+)
G125662 NA non-coding downstream 263381 20594040 ~ 20631194 (+)
G125668 NA non-coding downstream 273032 20603691 ~ 20611664 (+)
G125675 LOC106940919,LOC102232862,LOC103459816 non-coding downstream 318614 20649273 ~ 20651869 (+)
LOC120570651 NA non-coding downstream 337021 20667680 ~ 20679076 (+)
myo16 myo16,LOC103372229 other upstream 64797 20153855 ~ 20265590 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other upstream 337063 19968360 ~ 19993324 (+)
igsf3 LOC103352919,LOC104967650 other upstream 871113 19388015 ~ 19459274 (+)
tmsb4x NA other upstream 1239602 19089418 ~ 19090785 (+)
LOC120570507 NA other upstream 1502840 18818753 ~ 18827547 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other downstream 161519 20492178 ~ 20521274 (+)
mpc2b mpc2 other downstream 522430 20853089 ~ 20858916 (+)
G125757 rpl24 other downstream 529493 20860152 ~ 20865442 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other downstream 1288689 21619348 ~ 21634757 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other downstream 1324467 21655126 ~ 21691804 (+)

Expression


Co-expression Network