G126582 (rpl8,LOC106586796,LOC107673716,LOC106581950)


Basic Information

Item Value
gene id G126582
gene name rpl8,LOC106586796,LOC107673716,LOC106581950
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 24030045 ~ 24034174 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU170296
TATCAGTTTCATGTTACAATTGTAAATCTTGTATTTGTCCAGCTGTAAACAGAAAATGGCCACTTTGTTTTAGCAGTACACAAGATTAAGAGTTTCATTGCAACCATTTAGACTTGTCAGAGTAGAAAAAGCACATTCGTGTTACTAATACCATTTACAATAGCTCGGTACTCTTCAAGTGTCCAGGTAAGCCGTGACAACGATTGGACCAGCTAAACAGACTTCAGCAATCATTACTTGCatcatttacacctgtgcttttcctactgtgacatgccAAATAAGTCTTCTGTGGAAAGGGGCAAATTGTTGATCATTCTACCTCTCAATTCTAAACATCTGTCACACATTTGAtctttatgcatgtgtgtggacCCAGAAATGAATCAAAAGAAGTCTTTtggaacacatttttattatcAAGAAAGTCAGATTTAGTTCTCCTTCTCTTGCACGGTCTTTGTTCCACGCAGTCTGCCTGTACGACGGGCAGCGATAAGACCGACCTTGCGACCAGCGGGCGCATCCCTCCTGATCGTTGAGGGTTTGCCAATATGCTGATGGTTACCACCACCGAAGGGATGCTCAACGGGCTgcacagagaaaacaaaaagaggTTATCAGTCTGAGGGAAACCTTCATTTGTTATTGTAGTTGCAAAACCCAAAATGTACTGAATACTTTGCCTCATTTCCAGAGTGCAGAGACTGGCACAGACACAAGCTATACAGAAAAGGTCTTATAATACTGTTGGCAGAATAGCATAGTAATCTATCTTAGCTCCAGAAACACAGCACCAAACAAGCTTCTTTTTACTGAGCCGTAGGggatacgtacattttcacattAAGGGCAAATTTGGACTTCATTAATGTTAGGGattctgtgtttttaaatgtagacCCTCACACCATCCATTTAGGAAATCTTAAGTTGTCCGTCCCTCAAAAATGCTTCTACATTCAAGACCAAATCCTCATATCAGCGCCACCTTACCGGACAGTCACtaccaaaacattttaaaaagacaaaatgtcTAACCCAGCAGCCGAACCACTTCTCACATCTAAAACAGGTGCTCAAAAAGTGCTCCATTTAATGCAATACGTGCAAGGTCTCAAAACCTCTAGTAACTTTTGAGAGATATAAAACACAAGTTTGGAAAACTAAGCTAATGAGAACTTGTGGGGAGCAAGGCAGAAATGACAAGACGTTAAGAGTGTGACAACCTCTAACTCTGTATAGAACAGAAAACCACCTCTTTCTCCACCTTAAGGCTTCTCCTTAATcagtatattaaaaaaatactctTCCCCTACGCTTCAGTAGACAGTCAATTATTTATGTCCCGCATTATCTAGCCTTTCTCCAGAATGTACAAAACACGTCCTTCAAATATGTCAACATCTCATCTCGCACTGTTCCTCGTCCTGCATTGACTTCATAGAGAACGTCGTTGCAGTATGTTGGAGTTGACTTACGTTCATAGCCACACCACGGACACGTGGCCAGCAGTTCCTCTTGGCCTTGTACTTGTGGTAGGCACGACCAGCCTTCAGGATGGGCTTGTCAATACGACCACCTCCAGCAACCACCGACAACAGCTCTGTTGGCAGAGGCGATAACTTTCTTGGAGCCTGAGGGGAGCTTGACGCGGGACTTCTTGGTCTCAGGGTTGTGGGAGATGACGGTGGCGTAGTTTCCTGACGCGCGGGCCAGCTTGCCTCTGTCACCGGGCTTCTCTTCCACGCAGCAGATGATGGTTCCCTCGGGCATTGTGCCAACGGGCAGGACATTGCCGATGTTCAGCTGAGCTGTGGGATAAAAACAGTGAGACACGGGCTTCGTACTCAAACACTTCCATCCAACGTGACCCCAATTTCACCTGATTACGAGCACTGCATTTTAAAAGAACAAATGCTGCTGATATTTCTAAAATTGAGCCCAGTTTAAACATGCGCAAAATATAAACTTCTGAGGCATCATAAATGCActaaaagttaataaaaagatGTCAAACATGCTGCAgttgctaaaaaaaataattaaataaaatggagGCAGAGATGCATCCATTTTCTACTTCAAATCCTGGTCGGACACTCAATGTTAACCATATTTACCAAATATCCCAGTTCAGAGCTAGTCTGTACATAAACCTAATTACTTAACATGTGCTGGCAATttcacatagggctgggcagtatatcaatattatattgatatcgtgatatgagactagatatcttcTTGGATTTTGGAAATAATCATATCATAAAtggcttaagtgttgtctttatctggctttaaaggctgcattacagtaaagtgatgtaatttcctgtgttaccagactgttctagctcttctattattatttttacctttacccacttagtcatatctacattactgaagattatttatcttaaatctcattgtgaagatattgtttttaaagcaccaattgtcaaccctataatattgccacaatatcgacatcgaattattaggacaagaatatcgcaatatccaatattctccatatcgcccagctctaatttCACATCAGTCTTATTGGTGGACAAGTCACTTTC
>TU170297
TATCAGTTTCATGTTACAATTGTAAATCTTGTATTTGTCCAGCTGTAAACAGAAAATGGCCACTTTGTTTTAGCAGTACACAAGATTAAGAGTTTCATTGCAACCATTTAGACTTGTCAGAGTAGAAAAAGCACATTCGTGTTACTAATACCATTTACAATAGCTCGGTACTCTTCAAGTGTCCAGGTAAGCCGTGACAACGATTGGACCAGCTAAACAGACTTCAGCAATCATTACTTGCatcatttacacctgtgcttttcctactgtgacatgccAAATAAGTCTTCTGTGGAAAGGGGCAAATTGTTGATCATTCTACCTCTCAATTCTAAACATCTGTCACACATTTGAtctttatgcatgtgtgtggacCCAGAAATGAATCAAAAGAAGTCTTTtggaacacatttttattatcAAGAAAGTCAGATTTAGTTCTCCTTCTCTTGCACGGTCTTTGTTCCACGCAGTCTGCCTGTACGACGGGCAGCGATAAGACCGACCTTGCGACCAGCGGGCGCATCCCTCCTGATCGTTGAGGGTTTGCCAATATGCTGATGGTTACCACCACCGAAGGGATGCTCAACGGGCTgcacagagaaaacaaaaagaggTTATCAGTCTGAGGGAAACCTTCATTTGTTATTGTAGTTGCAAAACCCAAAATGTACTGAATACTTTGCCTCATTTCCAGAGTGCAGAGACTGGCACAGACACAAGCTATACAGAAAAGGTCTTATAATACTGTTGGCAGAATAGCATAGTAATCTATCTTAGCTCCAGAAACACAGCACCAAACAAGCTTCTTTTTACTGAGCCGTAGGggatacgtacattttcacattAAGGGCAAATTTGGACTTCATTAATGTTAGGGattctgtgtttttaaatgtagacCCTCACACCATCCATTTAGGAAATCTTAAGTTGTCCGTCCCTCAAAAATGCTTCTACATTCAAGACCAAATCCTCATATCAGCGCCACCTTACCGGACAGTCACtaccaaaacattttaaaaagacaaaatgtcTAACCCAGCAGCCGAACCACTTCTCACATCTAAAACAGGTGCTCAAAAAGTGCTCCATTTAATGCAATACGTGCAAGGTCTCAAAACCTCTAGTAACTTTTGAGAGATATAAAACACAAGTTTGGAAAACTAAGCTAATGAGAACTTGTGGGGAGCAAGGCAGAAATGACAAGACGTTAAGAGTGTGACAACCTCTAACTCTGTATAGAACAGAAAACCACCTCTTTCTCCACCTTAAGGCTTCTCCTTAATcagtatattaaaaaaatactctTCCCCTACGCTTCAGTAGACAGTCAATTATTTATGTCCCGCATTATCTAGCCTTTCTCCAGAATGTACAAAACACGTCCTTCAAATATGTCAACATCTCATCTCGCACTGTTCCTCGTCCTGCATTGACTTCATAGAGAACGTCGTTGCAGTATGTTGGAGTTGACTTACGTTCATAGCCACACCACGGACACGTGGCCAGCAGTTCCTCTTGGCCTTGTACTTGTGGTAGGCACGACCAGCCTTCAGGATGGGCTTGTCAATACGACCACCTCCAGCAACCAcacctttaaaaacacacacacgcggtcAAAAAGAGCAATCACATTCTTCAGTTCACAAACGTTAGTTTCCAAAGTAACGTCATAGTGACAATGAGGAAACTTTAAAGCTTTACCAGACACGTTAAGGGTCCTTACCGACAACAGCTCTGTTGGCAGAGGCGATAACTTTCTTGGAGCCTGAGGGGAGCTTGACGCGGGACTTCTTGGTCTCAGGGTTGTGGGAGATGACGGTGGCGTAGTTTCCTGACGCGCGGGCCAGCTTGCCTCTGTCACCGGGCTTCTCTTCCACGCAGCAGATGATGGTTCCCTCGGGCATTGTGCCAACGGGCAGGACATTGCCGATGTTCAGCTGAGCCTTGCCGCAGTAGATGAACTGTCCAGTATGGATGCCCTCAGCAGCGATGAAGAGCTCAGTCCTCTTCTTGAAGCGGTATGGGTCACGGAAGGCCACTTTGGCCAGGGGAGCACCACGGCCGGGATCATGGATAATCCTTCACAATCCCCTTGATGTAACCATGGCGTTCAGCGAAGTCAATGTGACGGAGTTTAGCGGCACCTTTTCTGTGCTTGACGTGGGCTTTGAACACGGAGCCCGCACCTTTTCTCTGTCCCCTGATTACACGTCCCATCGTGTACtgaaacagagacacatacGGCGTTATTTACCAGCTTGACATGTGAGTGCTAACTTTTGAGGCCTGTAGCAGTTGCTAATGCTGTCAGCTAATTAGGGACTATTAAACACATTCACCCTTCTTACGTGAATGTAATTTAAGCAGGCATTTGGTATATAGATTACAGTATCTATAGCTTCTCCAAACGGCTCGCATAAGAGACAAAACACAGATCCGTTCTGTAGCGTTTGCCGGCCTTTTAGCCGTCACCGCTACTTACTGCACCATGTCACCACTCAGCCACAGAACCACAACAAAACGCTTCAAAACAAATGTCTGCCTTTAAAATACTCAGTAGGACACATTCTTATACATCTCATGCGCATTtagaaatgtttgtttaaagtggATGAACTAAGAAAAACATGATTTAGAACAGATTTTACAAGGGGAATCAGACA
>TU170299
TATCAGTTTCATGTTACAATTGTAAATCTTGTATTTGTCCAGCTGTAAACAGAAAATGGCCACTTTGTTTTAGCAGTACACAAGATTAAGAGTTTCATTGCAACCATTTAGACTTGTCAGAGTAGAAAAAGCACATTCGTGTTACTAATACCATTTACAATAGCTCGGTACTCTTCAAGTGTCCAGGTAAGCCGTGACAACGATTGGACCAGCTAAACAGACTTCAGCAATCATTACTTGCatcatttacacctgtgcttttcctactgtgacatgccAAATAAGTCTTCTGTGGAAAGGGGCAAATTGTTGATCATTCTACCTCTCAATTCTAAACATCTGTCACACATTTGAtctttatgcatgtgtgtggacCCAGAAATGAATCAAAAGAAGTCTTTtggaacacatttttattatcAAGAAAGTCAGATTTAGTTCTCCTTCTCTTGCACGGTCTTTGTTCCACGCAGTCTGCCTGTACGACGGGCAGCGATAAGACCGACCTTGCGACCAGCGGGCGCATCCCTCCTGATCGTTGAGGGTTTGCCAATATGCTGATGGTTACCACCACCGAAGGGATGCTCAACGGGCTgcacagagaaaacaaaaagaggTTATCAGTCTGAGGGAAACCTTCATTTGTTATTGTAGTTGCAAAACCCAAAATGTACTGAATACTTTGCCTCATTTCCAGAGTGCAGAGACTGGCACAGACACAAGCTATACAGAAAAGGTCTTATAATACTGTTGGCAGAATAGCATAGTAATCTATCTTAGCTCCAGAAACACAGCACCAAACAAGCTTCTTTTTACTGAGCCGTAGGggatacgtacattttcacattAAGGGCAAATTTGGACTTCATTAATGTTAGGGattctgtgtttttaaatgtagacCCTCACACCATCCATTTAGGAAATCTTAAGTTGTCCGTCCCTCAAAAATGCTTCTACATTCAAGACCAAATCCTCATATCAGCGCCACCTTACCGGACAGTCACtaccaaaacattttaaaaagacaaaatgtcTAACCCAGCAGCCGAACCACTTCTCACATCTAAAACAGGTGCTCAAAAAGTGCTCCATTTAATGCAATACGTGCAAGGTCTCAAAACCTCTAGTAACTTTTGAGAGATATAAAACACAAGTTTGGAAAACTAAGCTAATGAGAACTTGTGGGGAGCAAGGCAGAAATGACAAGACGTTAAGAGTGTGACAACCTCTAACTCTGTATAGAACAGAAAACCACCTCTTTCTCCACCTTAAGGCTTCTCCTTAATcagtatattaaaaaaatactctTCCCCTACGCTTCAGTAGACAGTCAATTATTTATGTCCCGCATTATCTAGCCTTTCTCCAGAATGTACAAAACACGTCCTTCAAATATGTCAACATCTCATCTCGCACTGTTCCTCGTCCTGCATTGACTTCATAGAGAACGTCGTTGCAGTATGTTGGAGTTGACTTACGTTCATAGCCACACCACGGACACGTGGCCAGCAGTTCCTCTTGGCCTTGTACTTGTGGTAGGCACGACCAGCCTTCAGGATGGGCTTGTCAATACGACCACCTCCAGCAACCAcaCGACAACAGCTCTGTTGGCAGAGGCGATAACTTTCTTGGAGCCTGAGGGGAGCTTGACGCGGGACTTCTTGGTCTCAGGGTTGTGGGAGATGACGGTGGCGTAGTTTCCTGACGCGCGGGCCAGCTTGCCTCTGTCACCGGGCTTCTCTTCCACGCAGCAGATGATGGTTCCCTCGGGCATTGTGCCAACGGGCAGGACATTGCCGATGTTCAGCTGAGCCCTTCTTGCCGCAGTAGATGAACTGTCCAGTATGGATGCCCTCAGCAGCGATGAAGAGCTCAGTCCTCTTCTTGAAGCGGTATGGGTCACGGAAGGCCACTTTGGCCAGGGGAGCACCACGGCCGGGATCATGGATAATATCCTGAGAGGGTAGACCACCACAAGAAAACAATGTCATTGATTGTTCACCAACAACCGGTGTGGGGACTTCAATCTGCTCCTACGACAGTGCCAGAGTCCTCACTTACCTTCACAATCCCCTTGATGTAACCATGGCGTTCAGCGAAGTCAATGTGACGGAGTTTAGCGGCACCTTTTCTGTGCTTGACGTGGGCTTTGAACACGGAGCCCGCACCTTTTCTCTGTCCCCTGATTACACGTCCCATCGTGTACtgaaacagagacacatacGGCGTTATTTACCAGCTTGACATGTGAGTGCTAACTTTTGAGGCCTGTAGCAGTTGCTAATGCTGTCAGCTAATTAGGGACTATTAAACACATTCACCCTTCTTACGTGAATGTAATTTAAGCAGGCATTTGGTATATAGATTACAGTATCTATAGCTTCTCCAAACGGCTCGCATAAGAGACAAAACACAGATCCGTTCTGTAGCGTTTGCCGGCCTTTTAGCCGTCACCGCTACTTACTGCACCATGTCACCACTCAGCCACAGAACCACAACAAAACGCTTCAAAACAAATGTCTGCCTTTAAAATACTCAGTAGGACACATTCTTATACATCTCATGCGCATTtagaaatgtttgtttaaagtggATGAACTAAGAAAAACATGATTTAGAACAGATTTTACAAGGGGAATCAGACA

Function

symbol description
rpl8 Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to act upstream of or within translation. Predicted to be located in cytoplasm and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in endodermal cell; intestine; liver; and pancreas. Orthologous to human RPL8 (ribosomal protein L8).

NR:

description
PREDICTED: 60S ribosomal protein L8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170296 False 2597 lncRNA 0.41 2 24030045 24032775
TU170297 True 2669 lncRNA 0.44 3 24030045 24034174
TU170299 False 2648 lncRNA 0.45 3 24030045 24034174

Neighbor

gene id symbol gene type direction distance location
usp9 usp9x,LOC104960511,LOC100693451 coding upstream 1275 23979737 ~ 24028770 (+)
ppp2r3b ppp2r3b,LOC100705877,LOC102783484,LOC107099188,LOC102198241 coding upstream 100636 23905136 ~ 23929409 (+)
asmtl NA coding upstream 326118 23695387 ~ 23703927 (+)
p2ry8 p2ry8,gpr82,LOC103134757 coding upstream 334851 23690836 ~ 23695194 (+)
upf3a upf3a,LOC104960519 coding upstream 340168 23679658 ~ 23689877 (+)
itga4 itga4 coding downstream 33096 24067270 ~ 24089428 (+)
LOC120569576 NA coding downstream 103953 24138127 ~ 24152773 (+)
LOC120569575 ssfa2 coding downstream 118902 24153076 ~ 24179221 (+)
znf385b znf385b,LOC102780200 coding downstream 172485 24206659 ~ 24255994 (+)
LOC120569821 NA coding downstream 228013 24262187 ~ 24274142 (+)
G126581 NA non-coding upstream 24403 24005073 ~ 24005642 (+)
G126563 NA non-coding upstream 82077 23946144 ~ 23947968 (+)
G126520 NA non-coding upstream 316068 23713488 ~ 23713977 (+)
G126519 NA non-coding upstream 318927 23710403 ~ 23711118 (+)
G126516 NA non-coding upstream 324343 23704943 ~ 23705702 (+)
LOC120570646 NA non-coding downstream 702 24034876 ~ 24039495 (+)
G126628 NA non-coding downstream 57896 24092070 ~ 24098838 (+)
G126675 NA non-coding downstream 146276 24180450 ~ 24182202 (+)
G126712 NA non-coding downstream 346185 24380359 ~ 24383546 (+)
G126744 NA non-coding downstream 421563 24455737 ~ 24456127 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 929962 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 1214943 22807193 ~ 22815102 (+)
fbxl3a fbxl3 other upstream 1291392 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 2338241 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 2395288 21619348 ~ 21634757 (+)
cwc22 cwc22 other downstream 149775 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 242983 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 338297 24372471 ~ 24394985 (+)
cacnb4a cacnb4 other downstream 1595933 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 2082814 26116988 ~ 26129879 (+)

Expression


Co-expression Network