LOC120569821


Basic Information

Item Value
gene id LOC120569821
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 24262187 ~ 24274142 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817936.1
TCTGGGATAAGTGTGAAGCCTCAGAGAGATCCAGAGAGAAGCTGACAACTGCTGCAACAGGATTATTAACAGTATTTGTATTCAGAGAGAAACAATTTCCACTTATTGTGGTACTTATATGTGGGAGAAttgcatttgttgttgttgtacttgTAGTAACAGAGGGTACTTATTTTCGTGGTATTGCGTATATATTGGTAGCTTTTGAacttgttgtaataatattACTTTGTCATAGAGATATTTCTACATgtagttttaaaagtatttgtAGTTTTAAGATATATCTTTGTGCAATGATTGTTAGTTATTTCAGTAGACATAATAGCACTTAATGAATGAACTGATGAAAAGTATAGACTGCAGGTGTAAAGTAAAAATCTGAGTCGTACAGAATAGAGTATAAGTAGAGTCCAGTAAAATGCAGGACTATGAGGAGTCAGTGTCGTTCCTGGGGACCTGGGGCCCATTTCAGAAGAGAACCTTCTTCCTGCTCTGTCTCACCACCATCCCAAGTGGATACAACCTCCTGGCTGTCATCTTCCTGCTGGCAACGCCCCCGCACCAATGCTACATCCCCGACAATAGCAACCTAAGCCAGGACTGGATCCAGACCAGCATCCCAGTACAGCAGATGGCCGGGCGGCTTGAGAGGAGCAGTTGTAGCCGGTACGAGATGGAACTGGTGCAGAACCTGTCTGCACTGGGAACCAGACCCAGCCTGGACCTGATCCACAACCTGTCAGGTCCAGTGTTCCTTCTCTCTAGCCTGAAGCAGGAGGGCTGTAAAGATGGATGGACCTACAGTACTGAGCACTACGAGTCTACTGTAGTCACTGAGTTTAACCTCGTGTGCAGGGACCAATGGAAACAGCCTCTGACCTCTGTCGTCTACTTCCTGGGAGGACTGTTCGGATGCTTCATCTCTGGGCAGATTTCTGACCGATTTGGCAGGAAGCCTGTACTGTTCGGTGCCATCACTGCGCTGAGCATCTTCAGCAGTGCTGTGGCCTTTGCTCCGTCCTGGCCCGTCTTCACCATGCTCTTCTTTTTGCTGGGCCTGGGTCAGATCACCAGCTACATAGTTGCGTTTGTTCTGGGTTCAGAGATCCTGATTGGTTCGACTAGAGTTCTCTTCTCCAACCTGTGTTTGCCTTGGGTCTACGTGTTCGGTATGATGGTGCTGCCTGTCACTGCTTACCTGGTTAGGAGCTGGAGACACCTGTCACTGACCATGGCTGTGCCAGGCCTGGCCTGTATCCCCCTCTGGTGGCTGATCCCAGAGTCTCCTCGCTGGTTGGTGTCTCGAGGCCGTTTTCAGGAAGCAGAACTCCTGCTGAGGTCAGCGGCTCTGGAGAACCGAGTGGAAGCTCCACATGTCATCTTCCTCTCAGCCAACGTTGAAAAAGCAAAAAGTGAGACGACAGAGTCCCCCAATTTCCTGGACCTGCTGAGGACAGCAAACATTCGACAGATTACATTTATTCTTTGGCTCATGTGGTTTTCTTTGAGTATAAGCTACTTTGGACTGTCATTCAACATGTCTGGTCTCTATGGCAACCCTTTCCTGAACTACTTCCTGGTGACGGCTGTTGAGCTCCCAGCGTACGCTGCCAGTTGGCTGGCGGCACGCAGTCTTCCTCGCCGCCTGTCGTATATCAGCTTCACCCTGCTGGGGGCGCTAGCTCTGCTCCTCATCCAAATCACTTTGTACAGTTATCCAACTCTCACCCTGACCCTGGTGCTGCTCGGTAAATTTGGCCTTCTGGCTGGTGCCGGGGTGTTGTACATGTTCACTGGTGAGCTTTCTCCCACAGTCATCAGGAACACAGCAATGTCCTCTTGTGCCATGTTCTCCAGAGTTGGGTCCTCTGTTTCCCCGTACCTGCTGCAGCTGGCTGTGTTCAATGAGTTCCTGCCGTGGGTCGTTGTAGGTTCTCTGTCTGTGCTCAGTGTTCTGGTCTGCGTCTTCCTGCCAGAGACCTTCAAACAGCCGCTGCCTGACACCATCCAGCAGATGGCGCTAACACATCGGTTCAGGTGGCCATGGGCCTCCATGTCTCTGTCAGAGGATGATGGGAAATCAGTTAAAGACCAGACTACTACACCTGAGATCATCTGCACAACTCACCTATAAGACtcacaaaaaaatgaaagaaaacaaaaacaacggACAACGGACAACACTAAAACTGCCATCGCCAACAAAACAAGGTTATATTTTAGGAATTAAATATAAGACTTGTGAACCCTGGGAGTGAGGCATTCATTGACACCTTATGAATAGTAACAGTTTGTTGTCTTTACATACAGTAGAGACAGAGTGCACTACTGAGATGGAAAAGGACACTATTGCAAAGCTTTGCTGAAAATAAGGAATCACATctattaaagctacattgtgaaagaatttctcccatctctagcggtgaaattgtatatgacaaccaactgaatattactttctagcccttcccattccgagctcctacggtggccgaaccc
>XM_039817937.1
CTGGGATAAGTGTGAAGCCTCAGAGAGATCCAGAGAGAAGCTGACAACTGCTGCAACAGGATTATTAACAGTATTTGTATTCAGAGAGAAACAATTTCCACTTATTGTGGTACTTATATGTGGGAGAAttgcatttgttgttgttgtacttgTAGTAACAGAGGGTACTTATTTTCGTGGTATTGCGTATATATTGGTAGCTTTTGAacttgttgtaataatattACTTTGTCATAGAGATATTTCTACATgtagttttaaaagtatttgtAGTTTTAAGATATATCTTTGTGCAATGATTGTTAGTTATTTCAGTAGACATAATAGCACTTAATGAATGAACTGATGAAAAGTATAGACTGCAGGTGTAAAGTAAAAATCTGAGTCGTACAGAATAGAGTATAAGTAGAGTCCAGTAAAATGCAGGACTATGAGGAGTCAGTGTCGTTCCTGGGGACCTGGGGCCCATTTCAGAAGAGAACCTTCTTCCTGCTCTGTCTCACCACCATCCCAAGTGGATACAACCTCCTGGCTGTCATCTTCCTGCTGGCAACGCCCCCGCACCAATGCTACATCCCCGACAATAGCAACCTAAGCCAGGACTGGATCCAGACCAGCATCCCAGTACAGATGGCCGGGCGGCTTGAGAGGAGCAGTTGTAGCCGGTACGAGATGGAACTGGTGCAGAACCTGTCTGCACTGGGAACCAGACCCAGCCTGGACCTGATCCACAACCTGTCAGGTCCAGTGTTCCTTCTCTCTAGCCTGAAGCAGGAGGGCTGTAAAGATGGATGGACCTACAGTACTGAGCACTACGAGTCTACTGTAGTCACTGAGTTTAACCTCGTGTGCAGGGACCAATGGAAACAGCCTCTGACCTCTGTCGTCTACTTCCTGGGAGGACTGTTCGGATGCTTCATCTCTGGGCAGATTTCTGACCGATTTGGCAGGAAGCCTGTACTGTTCGGTGCCATCACTGCGCTGAGCATCTTCAGCAGTGCTGTGGCCTTTGCTCCGTCCTGGCCCGTCTTCACCATGCTCTTCTTTTTGCTGGGCCTGGGTCAGATCACCAGCTACATAGTTGCGTTTGTTCTGGGTTCAGAGATCCTGATTGGTTCGACTAGAGTTCTCTTCTCCAACCTGTGTTTGCCTTGGGTCTACGTGTTCGGTATGATGGTGCTGCCTGTCACTGCTTACCTGGTTAGGAGCTGGAGACACCTGTCACTGACCATGGCTGTGCCAGGCCTGGCCTGTATCCCCCTCTGGTGGCTGATCCCAGAGTCTCCTCGCTGGTTGGTGTCTCGAGGCCGTTTTCAGGAAGCAGAACTCCTGCTGAGGTCAGCGGCTCTGGAGAACCGAGTGGAAGCTCCACATGTCATCTTCCTCTCAGCCAACGTTGAAAAAGCAAAAAGTGAGACGACAGAGTCCCCCAATTTCCTGGACCTGCTGAGGACAGCAAACATTCGACAGATTACATTTATTCTTTGGCTCATGTGGTTTTCTTTGAGTATAAGCTACTTTGGACTGTCATTCAACATGTCTGGTCTCTATGGCAACCCTTTCCTGAACTACTTCCTGGTGACGGCTGTTGAGCTCCCAGCGTACGCTGCCAGTTGGCTGGCGGCACGCAGTCTTCCTCGCCGCCTGTCGTATATCAGCTTCACCCTGCTGGGGGCGCTAGCTCTGCTCCTCATCCAAATCACTTTGTACAGTTATCCAACTCTCACCCTGACCCTGGTGCTGCTCGGTAAATTTGGCCTTCTGGCTGGTGCCGGGGTGTTGTACATGTTCACTGGTGAGCTTTCTCCCACAGTCATCAGGAACACAGCAATGTCCTCTTGTGCCATGTTCTCCAGAGTTGGGTCCTCTGTTTCCCCGTACCTGCTGCAGCTGGCTGTGTTCAATGAGTTCCTGCCGTGGGTCGTTGTAGGTTCTCTGTCTGTGCTCAGTGTTCTGGTCTGCGTCTTCCTGCCAGAGACCTTCAAACAGCCGCTGCCTGACACCATCCAGCAGATGGCGCTAACACATCGGTTCAGGTGGCCATGGGCCTCCATGTCTCTGTCAGAGGATGATGGGAAATCAGTTAAAGACCAGACTACTACACCTGAGATCATCTGCACAACTCACCTATAAGACtcacaaaaaaatgaaagaaaacaaaaacaacggACAACGGACAACACTAAAACTGCCATCGCCAACAAAACAAGGTTATATTTTAGGAATTAAATATAAGACTTGTGAACCCTGGGAGTGAGGCATTCATTGACACCTTATGAATAGTAACAGTTTGTTGTCTTTACATACAGTAGAGACAGAGTGCACTACTGAGATGGAAAAGGACACTATTGCAAAGCTTTGCTGAAAATAAGGAATCACATctattaaagctacattgtgaaagaatttctcccatctctagcggtgaaattgtatatgacaaccaactgaatattactttctagcccttcccattccgagctcctacggtggccgaacc
>XM_039817938.1
TCTGGGATAAGTGTGAAGCCTCAGAGAGATCCAGAGAGAAGCTGACAACTGCTGCAACAGGATTATTAACAGTATTTGTATTCAGAGAGAAACAATTTCCACTTATTGTGGTACTTATATGTGGGAGAAttgcatttgttgttgttgtacttgTAGTAACAGAGGGTACTTATTTTCGTGGTATTGCGTATATATTGGTAGCTTTTGAacttgttgtaataatattACTTTGTCATAGAGATATTTCTACATgtagttttaaaagtatttgtAGTTTTAAGATATATCTTTGTGCAATGATTGTTAGTTATTTCAGTAGACATAATAGCACTTAATGAATGAACTGATGAAAAGTATAGACTGCAGGTGTAAAGTAAAAATCTGAGTCGTACAGAATAGAGTATAAGTAGAGTCCAGTAAAATGCAGGACTATGAGGAGTCAGTGTCGTTCCTGGGGACCTGGGGCCCATTTCAGAAGAGAACCTTCTTCCTGCTCTGTCTCACCACCATCCCAAGTGGATACAACCTCCTGGCTGTCATCTTCCTGCTGGCAACGCCCCCGCACCAATGCTACATCCCCGACAATAGCAACCTAAGCCAGGACTGGATCCAGACCAGCATCCCAGTACAGTTTAACCTCGTGTGCAGGGACCAATGGAAACAGCCTCTGACCTCTGTCGTCTACTTCCTGGGAGGACTGTTCGGATGCTTCATCTCTGGGCAGATTTCTGACCGATTTGGCAGGAAGCCTGTACTGTTCGGTGCCATCACTGCGCTGAGCATCTTCAGCAGTGCTGTGGCCTTTGCTCCGTCCTGGCCCGTCTTCACCATGCTCTTCTTTTTGCTGGGCCTGGGTCAGATCACCAGCTACATAGTTGCGTTTGTTCTGGGTTCAGAGATCCTGATTGGTTCGACTAGAGTTCTCTTCTCCAACCTGTGTTTGCCTTGGGTCTACGTGTTCGGTATGATGGTGCTGCCTGTCACTGCTTACCTGGTTAGGAGCTGGAGACACCTGTCACTGACCATGGCTGTGCCAGGCCTGGCCTGTATCCCCCTCTGGTGGCTGATCCCAGAGTCTCCTCGCTGGTTGGTGTCTCGAGGCCGTTTTCAGGAAGCAGAACTCCTGCTGAGGTCAGCGGCTCTGGAGAACCGAGTGGAAGCTCCACATGTCATCTTCCTCTCAGCCAACGTTGAAAAAGCAAAAAGTGAGACGACAGAGTCCCCCAATTTCCTGGACCTGCTGAGGACAGCAAACATTCGACAGATTACATTTATTCTTTGGCTCATGTGGTTTTCTTTGAGTATAAGCTACTTTGGACTGTCATTCAACATGTCTGGTCTCTATGGCAACCCTTTCCTGAACTACTTCCTGGTGACGGCTGTTGAGCTCCCAGCGTACGCTGCCAGTTGGCTGGCGGCACGCAGTCTTCCTCGCCGCCTGTCGTATATCAGCTTCACCCTGCTGGGGGCGCTAGCTCTGCTCCTCATCCAAATCACTTTGTACAGTTATCCAACTCTCACCCTGACCCTGGTGCTGCTCGGTAAATTTGGCCTTCTGGCTGGTGCCGGGGTGTTGTACATGTTCACTGGTGAGCTTTCTCCCACAGTCATCAGGAACACAGCAATGTCCTCTTGTGCCATGTTCTCCAGAGTTGGGTCCTCTGTTTCCCCGTACCTGCTGCAGCTGGCTGTGTTCAATGAGTTCCTGCCGTGGGTCGTTGTAGGTTCTCTGTCTGTGCTCAGTGTTCTGGTCTGCGTCTTCCTGCCAGAGACCTTCAAACAGCCGCTGCCTGACACCATCCAGCAGATGGCGCTAACACATCGGTTCAGGTGGCCATGGGCCTCCATGTCTCTGTCAGAGGATGATGGGAAATCAGTTAAAGACCAGACTACTACACCTGAGATCATCTGCACAACTCACCTATAAGACtcacaaaaaaatgaaagaaaacaaaaacaacggACAACGGACAACACTAAAACTGCCATCGCCAACAAAACAAGGTTATATTTTAGGAATTAAATATAAGACTTGTGAACCCTGGGAGTGAGGCATTCATTGACACCTTATGAATAGTAACAGTTTGTTGTCTTTACATACAGTAGAGACAGAGTGCACTACTGAGATGGAAAAGGACACTATTGCAAAGCTTTGCTGAAAATAAGGAATCACATctattaaagctacattgtgaaagaatttctcccatctctagcggtgaaattgtatatgacaaccaactgaatattactttctagcccttcccattccgagctcctacggtggccgaaccc

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817936.1 True 2505 mRNA 0.48 11 24262187 24274142
XM_039817937.1 False 2500 mRNA 0.48 11 24262188 24274141
XM_039817938.1 False 2295 mRNA 0.47 10 24262187 24274142

Neighbor

gene id symbol gene type direction distance location
znf385b znf385b,LOC102780200 coding upstream 6193 24206659 ~ 24255994 (+)
LOC120569575 ssfa2 coding upstream 82966 24153076 ~ 24179221 (+)
LOC120569576 NA coding upstream 109414 24138127 ~ 24152773 (+)
itga4 itga4 coding upstream 172759 24067270 ~ 24089428 (+)
usp9 usp9x,LOC104960511,LOC100693451 coding upstream 233417 23979737 ~ 24028770 (+)
plekhm3 plekhm3 coding downstream 36765 24310907 ~ 24345969 (+)
fhip1b fam160a2 coding downstream 404355 24678497 ~ 24706412 (+)
LOC120570682 NA coding downstream 593179 24867321 ~ 24867439 (+)
dhrs12 dhrs12,LOC102790591 coding downstream 593670 24867812 ~ 24880693 (+)
ints6 ints6 coding downstream 636943 24911085 ~ 24935004 (+)
G126675 NA non-coding upstream 79985 24180450 ~ 24182202 (+)
G126628 NA non-coding upstream 163349 24092070 ~ 24098838 (+)
LOC120570646 NA non-coding upstream 222692 24034876 ~ 24039495 (+)
G126582 rpl8,LOC106586796,LOC107673716,LOC106581950 non-coding upstream 228013 24030045 ~ 24034174 (+)
G126581 NA non-coding upstream 256545 24005073 ~ 24005642 (+)
G126712 NA non-coding downstream 106217 24380359 ~ 24383546 (+)
G126744 NA non-coding downstream 181595 24455737 ~ 24456127 (+)
G126802 NA non-coding downstream 570834 24844976 ~ 24859362 (+)
LOC120570481 LOC106579430,LOC106609078,LOC107088658 non-coding downstream 575256 24849398 ~ 24852960 (+)
G126807 NA non-coding downstream 607952 24882094 ~ 24883308 (+)
cwc22 cwc22 other upstream 62352 24183949 ~ 24199835 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 1162104 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 1447085 22807193 ~ 22815102 (+)
fbxl3a fbxl3 other upstream 1523534 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 2570383 21655126 ~ 21691804 (+)
sestd1 sestd1 other downstream 3015 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 98329 24372471 ~ 24394985 (+)
cacnb4a cacnb4 other downstream 1355965 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 1842846 26116988 ~ 26129879 (+)
mphosph8 mphosph8 other downstream 2137335 26411477 ~ 26439285 (+)

Expression


Co-expression Network