G126807


Basic Information

Item Value
gene id G126807
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 24882094 ~ 24883308 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU170636
aaaagcttacagcaccgggtattcccaggcggtctcccatccaagtactgacccggcccgaccctgcttagcttccgagatcggacgagatcgggcgtgttcagggtggtatggccgtaagcttacagcaccgggtattcccaggcggtctcccatccaagtactgacccggcccgaccctgcttagcttccgagatcggacgagatcgggcgtgttcagggtgg

Function

NR:

description
PREDICTED: nucleolar protein 56

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170636 True 225 lncRNA 0.61 2 24882094 24883308

Neighbor

gene id symbol gene type direction distance location
dhrs12 dhrs12,LOC102790591 coding upstream 1401 24867812 ~ 24880693 (+)
LOC120570682 NA coding upstream 14655 24867321 ~ 24867439 (+)
fhip1b fam160a2 coding upstream 175682 24678497 ~ 24706412 (+)
plekhm3 plekhm3 coding upstream 536125 24310907 ~ 24345969 (+)
LOC120569821 NA coding upstream 607952 24262187 ~ 24274142 (+)
ints6 ints6 coding downstream 27777 24911085 ~ 24935004 (+)
tsn tsn coding downstream 97050 24980358 ~ 24983278 (+)
eaf2 eaf2 coding downstream 172008 25055316 ~ 25061613 (+)
si:dkey-91i10.3 LOC100693469,LOC101478374,LOC102212757,LOC102307164 coding downstream 185323 25068631 ~ 25087502 (+)
slc15a2 LOC102778044 coding downstream 217298 25100606 ~ 25131140 (+)
G126802 NA non-coding upstream 22732 24844976 ~ 24859362 (+)
LOC120570481 LOC106579430,LOC106609078,LOC107088658 non-coding upstream 29134 24849398 ~ 24852960 (+)
G126744 NA non-coding upstream 425967 24455737 ~ 24456127 (+)
G126712 NA non-coding upstream 498548 24380359 ~ 24383546 (+)
G126675 NA non-coding upstream 699892 24180450 ~ 24182202 (+)
LOC120569827 NA non-coding downstream 329958 25213266 ~ 25216510 (+)
G126904 NA non-coding downstream 333650 25216958 ~ 25219676 (+)
G127054 NA non-coding downstream 941964 25825272 ~ 25826290 (+)
LOC120570231 NA non-coding downstream 1198581 26081889 ~ 26084505 (+)
G127095 NA non-coding downstream 1214965 26098273 ~ 26098541 (+)
fzd5 LOC104950716,LOC108238837 other upstream 487109 24372471 ~ 24394985 (+)
sestd1 sestd1 other upstream 583876 24277157 ~ 24298218 (+)
cwc22 cwc22 other upstream 682259 24183949 ~ 24199835 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 1782011 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 2066992 22807193 ~ 22815102 (+)
cacnb4a cacnb4 other downstream 746799 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 1233680 26116988 ~ 26129879 (+)
mphosph8 mphosph8 other downstream 1528169 26411477 ~ 26439285 (+)
zmym2 zmym2 other downstream 1566135 26449443 ~ 26484088 (+)
LOC120569906 NA other downstream 1830042 26713350 ~ 26717397 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G446227 NA non-coding CI01000314 null 1563590 ~ 1563982 (+)
rainbow trout (Oncorhynchus mykiss) G452540 NA non-coding NC_048569.1 CM023223.2 88039688 ~ 88039913 (-)
rainbow trout (Oncorhynchus mykiss) LOC118942089 NA misc NC_048584.1 CM023238.2 4620643 ~ 4620844 (-)
mexican tetra (Astyanax mexicanus) G129220 NA non-coding NC_035911.1 CM008314.1 3729562 ~ 3730928 (-)