ints6 (ints6)


Basic Information

Item Value
gene id ints6
gene name ints6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 24911085 ~ 24935004 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818272.1
AGCAGGGACACACTATGAGGGGGAACTTTGTTACTATGAAACTTAGGAATATTTGcaaaatattgtaaaaattATCAAAATCCCTCGTGAATCAATAACCTGCCCCTAGGGTCTGAGGTTGTTAGTTTAGTTTGCCCGAAAAGGGCTTCTACACTCACTATTCTTACACTTTTTTGAAAGAATGTGTGAGACAGagttagccagctagctagctagctgagagGTGATACAGGCGGCAGGAGAACAAAAGATCTTTTTGCGTTTTGGCCGGTTGTACTGACATCAAGTCCATGCAGAACGTGTCATTACCATCACAATGCCCGTTTTACTTTTTCTGATAGACACGTCCGCTTCAATGAACCAGCGCACCCATCTGGGCACTACCTATCTGGACATAGCAAAAGGCGCTGTTGAGACTTTTATGAAGCTCAGAGGGAGAGATCCGGCGAGCCGAGGGGACCGGTATATGTTGGTAAATTTTGAAGACGTTCCGTTCGGGATAAAGgctggaTGGAAAGAGAGCCATGCCATATTCATGACAGAGCTGAGGAACCTCCAAGCAGCTGGACTCACATCTATTGGCCAGTCCTTGAGGACCGCTTTTGATTTACTCAATCTCAATAGATTAGTGACTGGGATAGACAACTATGGACAGGGAAGGAATCCTTTTTTCCTCGAACCCGCCATTATAATCACAATCACTGACGGCAACAAGTTGACCAGCAGCGGTGGAGTCCAAGACGAGCTCCATCTGCCTCTGACCACCCCGCTGCCGGGTAGCGAGCTGACCAAGGAGCCCTTCCGCTGGGACCAGCGTCTATTCGCTCTGGTGCTGCGCATCCCTGGTAACGCTTCGGTGGAGCCCGAACCCCTCGGTGGCGTCCCGCCTGATGATTCTCCAATCACCCCAATGTGTGAGGTCACTGGAGgACGTTCCTACAGCGTGTTCTCTCAGCGAATGTTGAATCAGTGTCTGGAGTCACTGGTGCAGAAAATCCAGAGTGGAGTGGTGATAAACTTCGAGAAGACTGGGCCTGACCCTCCTCCTTTAGAGGATGCTCCAGCTGAGGTGGTGAAGTCTGGTCCACAGGCTTGGCATTGTTGTCACAAGCTGATTTACGTAAGACCCAACCCCAAAACCGGTGTCCCCATTGGTCACTGGCCCATCCCTGAGGCCTTCTGGCCGGACCAGAACTCCCCCACGCTGCCCCCCCGCTCAGCCCACCCCCACATTCGTTTCTCCTGTCTGGACGCGGAGCCCATGGTGATAGACAAGGTGCCCTTTGACAAGTATGAGCTGGAGCCTTCGCCTCTCACCCAGTACATTTTGGAGAGGAAGTCCCCGCACACCTGCTGGCAGgtgtttgtgtgtaacaGTGCCAAGTACAGTGACCTGGGCCAACCCTTTGGCTACTTAAAGGCCAGCACAGCTCTCAACTGTGTCAACCTGTTTGTGATGCCCTACAATTACCCCGTGCTTCTGCCACTTCTGGaTGACTTGATCAAAGTGCACAAGTTCAAGCCTACCATCAAATGGCGGCAGTCCTTTGAGAACTACCTGAAGACCATGCCTCCATATTATATCGGGTCCCTGAGGAAGGCTCTGAGAATCATGGGTGCACCAAACCTGCTGGCTGACAACATGGAGTATGGCCTGAGCTACAGCGTGGTCTCCTACCTGAAGAAGCTCAGCCAGCAGTCAAAAATTGAGTACGACCGCCTGATTGCCTTGATTGGTAAGAAACAGCCACCCGAGGCCGGCATCAAGGTGCGTTGGCGAGGTGGAGGTATTTCTCTGGCCCAGCGCAGGGACTTCATCCAGCAGCTGCAGAGTCTCTCTGGGGAGGCTCCGACTCTGCCCTTGGAGCTCAACCCCAAAGAGTTCCAGGGCTTCCAGCTGGCACTGCTCAACAAGGGCCTAAAGCCGCAGAGCTTTAGGAATCCCTACGACATACCACGCAGCCACCTGCTGGACCAGCTTAGCCGAATGAGGAGGAACCTGCTCAACACCAGCGTCTGTACTCTCAGAGGGCAGGACTCAGACCAGCTCCACAGCGTGCCAATAGCCCAGATGGGCAACTACCAAGACTTCCTAAAAGCTGCTCCTCAGCCTCTTCGAGACGCAGACCCTGAACAGCCCAAACGCCTCCACACATTCGGCAACCCCTTCAAACTAGACAAGAAGGGCATGATGATCGACGAGGCAGATGAGTTTGTGACCAGCCCTCAGAACAAGGGTAAGAGACCAGGAGACAGCAGCAACATGACGGGCGGAGGGCCCAAGAGACGTCGCTGCATGTCGCCTCTGCTGCGTCTAGGCAGAGCCTACACCCCTCCAGTAACACCGCCTGCCAGCCCTCGGCCAACCGACATGGACACGAATGACGGAGCAGCTGAACCGGACCTGATCATCAACCACCTGAATCAGAACCACTACGGCTCAGACGAGAGCTCAGACTCTGAGCTGGATCAACCCTCGGAGCCCGGCGACCACCAGGAGAACCACACGGCCGCGGAACCAGAGGACCTCCGGCACGGGgacgtggaggaggaggaggacgaagaGGAGAATGGGCAACCCCAGGCAGGCGAGCTGCAGCCGGGCAGCGAGGGAGGAGCGGAGATGGTGCTGGTGGAGGACCAGCCGCCTCGCTACCTGACACCTGCAGCTCTGAAGAAGCACATCCACATCGAGACCACCAAGGTCAACAACGAGCTGAGGACGCTCATCACCAGGGAGATCAGGAAACCTGGCCGACaCTATGAGAAGATCTTCCTCCTCCTGAAGCAGATCCAGGGCACTCTGGACACCCGACTCATCTTCCTCCAAAACATCATCAAAGAGGCGGCCAGGTTCAAGAAGCGCGTTCTCATCGAGCAGCTGGAAAACTTCCTCGAAGAGATCCACAACAGATCTAATAACATGAACCACGTGGACACGCTCTGAGACCAGCTCATTCCTAAACTTAACTCAATGAAAATGAACCTGACAACGCCCCACGTCCTTCtgaacccccccccacacacacacaccaccaccaccacaaccaccCCCACCTATACTTGGCCCCTGCGGAGAAGAGACAATACAGCATCTAGCTCTCAAACTATCACCTCTTCAGTGGACTCTCAACATTATTGATGGTCGCGTTGGTTTGCACACAGTTTAAACTAAAGTCAGTGTTGACCCTGAATGATGCAAGTTTTCAGATATCCAAAAGGGGGAGTGAGGAAGCATTTTATTGCTACAGGTGAAGTGTTTTGTCTACATAATGAAATTTTTGGCCTGTAGAACATTTGAGCATGGCTGTTTTCTGATCTGTGAACCCGTCCTGAAGCGTCCCCCTTCGCTTATTCTCCTCCTCCAATTtagattttcttctttttaaaagaCAAAGTGAAAAATCTCTCAAAAGACGAGGTGGATAAAACGAGGGAGTGCAGGACTTTTCTGGAGAGCAACAGATAGCAGCCTGCGTCTGAATGTTATGCTCAGTCGTGTTTtatttgtgatgatgatgtaatGGAGCCCCAGTGTAGAAGGGTTCAGGTTGTGTGTTGGTAACTCAGGGTCAAACAGGATCCAGTGGAGATGCTTATGAAACACTTTTCTTCCCTTACGTTCATTTACTTTTCCCTTCTTGTTAGGTCGTCTACTGTTTGTTTTGTGGGATGATGAGTTTGTTGTTCTGTTTGACTGTTGGAATTACCTTACACTCCACTAACTGAAGCACTCTAATGCTGAGTATGACTTGGCTCAAGTAATCAATTTGTGAACTTGTTGTTTATCTACCAGACTGGCGTATAATATTATTGAGTAGTAACTTCAGACTGAATAATTTGGACAAAACTGATTCACAGTTTTCATTACGTCTGGAAGCGTTAAACTTAAAAAATTCTGTGTCTTTTGCAATACAGGTTTTCTGAGAGATCAACACAAAGTTAAAATCCTTTTGAGTGATGCAACATCATTGGTTACAGATGTTGAAATACAGGGACAAAAAGCTCAGGAACTAACACTTACGCATCATAATCAGCAATAACATTGGAGCTACTTTTACCCCATTTTTATCTTAATTTTAGCCTGAAACAGCTGATATGCAACACAAACTGTTGTCCCCTGGAGTGTTGATGAACCAAGGTCTCAGATGCCAGCTTGTCCCAACATGCTGGTTGCTGCCAAATAACTTAACCTGTCCCCAAAACTCCTCCCCGCCATGAATCTCAAACCAACTTCTTGTCACTTAACCGTGAATGCACTTGTGTAAATTTGAGAATGTTtatttaatgtaatttaaaagaaaaacttaccTTTTTGTTGCAAAAGTTTTTTTCAGTCCTGTTCAATTTTCTCAAGTATACACAAATAATCTGAAGTAAGGTCTGGAGGTCAAGAGTTGATTTCTGATTCAGGGGGCAGCCCTCTTCTGTTCCCTCCCTCCTTGGACAGGGACCAAAATCTGCCATACTTGTCTTTGTTTGTGAAGAGGCCGCTACCAAAAGAGTATTTTGAATACACTGTAAAGATGTAAATAACCCTAGAGTACTATTTAAAGAGAATGTTCAGTGGAAAATGGCCTTTTTGTAAGTATTTCCATGAATAAAGTTTCTATTTTACACTGTGAAGGGCCATGTAAATAAAGTTGTTCTGTAAAGATGTG

Function

symbol description
ints6 Predicted to be involved in snRNA 3'-end processing. Predicted to be part of integrator complex. Orthologous to human INTS6 (integrator complex subunit 6).

NR:

description
integrator complex subunit 6-like

GO: NA

KEGG:

id description
K13143 INTS6, DDX26; integrator complex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818272.1 True 4661 mRNA 0.49 18 24911085 24935004

Neighbor

gene id symbol gene type direction distance location
dhrs12 dhrs12,LOC102790591 coding upstream 30392 24867812 ~ 24880693 (+)
LOC120570682 NA coding upstream 43646 24867321 ~ 24867439 (+)
fhip1b fam160a2 coding upstream 204673 24678497 ~ 24706412 (+)
plekhm3 plekhm3 coding upstream 565116 24310907 ~ 24345969 (+)
LOC120569821 NA coding upstream 636943 24262187 ~ 24274142 (+)
tsn tsn coding downstream 45354 24980358 ~ 24983278 (+)
eaf2 eaf2 coding downstream 120312 25055316 ~ 25061613 (+)
si:dkey-91i10.3 LOC100693469,LOC101478374,LOC102212757,LOC102307164 coding downstream 133627 25068631 ~ 25087502 (+)
slc15a2 LOC102778044 coding downstream 165602 25100606 ~ 25131140 (+)
slc49a4 dirc2 coding downstream 212087 25147091 ~ 25195255 (+)
G126807 NA non-coding upstream 27777 24882094 ~ 24883308 (+)
G126802 NA non-coding upstream 51723 24844976 ~ 24859362 (+)
LOC120570481 LOC106579430,LOC106609078,LOC107088658 non-coding upstream 58125 24849398 ~ 24852960 (+)
G126744 NA non-coding upstream 454958 24455737 ~ 24456127 (+)
G126712 NA non-coding upstream 527539 24380359 ~ 24383546 (+)
LOC120569827 NA non-coding downstream 278262 25213266 ~ 25216510 (+)
G126904 NA non-coding downstream 281954 25216958 ~ 25219676 (+)
G127054 NA non-coding downstream 890268 25825272 ~ 25826290 (+)
LOC120570231 NA non-coding downstream 1146885 26081889 ~ 26084505 (+)
G127095 NA non-coding downstream 1163269 26098273 ~ 26098541 (+)
fzd5 LOC104950716,LOC108238837 other upstream 516100 24372471 ~ 24394985 (+)
sestd1 sestd1 other upstream 612867 24277157 ~ 24298218 (+)
cwc22 cwc22 other upstream 711250 24183949 ~ 24199835 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 1811002 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 2095983 22807193 ~ 22815102 (+)
cacnb4a cacnb4 other downstream 695103 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 1181984 26116988 ~ 26129879 (+)
mphosph8 mphosph8 other downstream 1476473 26411477 ~ 26439285 (+)
zmym2 zmym2 other downstream 1514439 26449443 ~ 26484088 (+)
LOC120569906 NA other downstream 1778346 26713350 ~ 26717397 (+)

Expression


Co-expression Network