G128287


Basic Information

Item Value
gene id G128287
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 30957941 ~ 30958718 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU172554
ggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaagggttaaggttaggtatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttagggtaaggggctagggaatgcattatgtcaatgacgggtccccacaaagatagtgccacgcactatgagtgtgtttgtgtgtgtgcgtgcgtgtgtttaaCAGACAGATACAGGAAAGCCAGCTGAATTTTGGGTTGTGCAGCTTCTTTTTACAAACATACCACAACATTTGCTCATCTGAAGAGCTTCCAACAGTCCCC
>TU172555
ggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaagggttaaggttaggtatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaaggggctagggaatgcattatgtcaatgacgggtccccacaaagatagtgccacgcactatgagtgtgtttgtgtgtgtgcgtgcgtgtgtttaaCAGACAGATACAGGAAAGCCAGCTGAATTTTGGGTTGTGCAGCTTCTTTTTACAAACATACCACAACATTTGCTCATCTGAAGAGCTTCCAACAGTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172554 False 457 lncRNA 0.42 3 30957941 30958718
TU172555 True 463 lncRNA 0.42 3 30957941 30958718

Neighbor

gene id symbol gene type direction distance location
ccdc80 LOC103363469 coding downstream 158300 30776319 ~ 30799641 (-)
f5 NA coding downstream 205549 30726939 ~ 30752392 (-)
rgcc rgcc,LOC103363473,LOC104939188 coding downstream 238490 30710701 ~ 30719451 (-)
dgkh dgkh,LOC102792327 coding downstream 414102 30458068 ~ 30543839 (-)
akap11 akap11 coding downstream 505710 30425640 ~ 30452231 (-)
kdm6a kdm6a coding upstream 27108 30985826 ~ 31054211 (-)
LOC120569688 NA coding upstream 431662 31390380 ~ 31395127 (-)
LOC120569690 NA coding upstream 440301 31399019 ~ 31405377 (-)
nyx nyx,LOC102775957 coding upstream 545473 31504191 ~ 31516333 (-)
ddx3xa ddx3x,LOC104933609,LOC101467955,LOC102776245 coding upstream 564767 31523485 ~ 31543222 (-)
G128253 NA non-coding downstream 181647 30774930 ~ 30776294 (-)
G128248 NA non-coding downstream 183081 30773774 ~ 30774860 (-)
G128241 NA non-coding downstream 184912 30734056 ~ 30773029 (-)
G128180 NA non-coding downstream 484680 30462258 ~ 30473261 (-)
G128184 NA non-coding downstream 544953 30409922 ~ 30412988 (-)
G128288 NA non-coding upstream 9912 30968630 ~ 30968861 (-)
G128292 NA non-coding upstream 24403 30983121 ~ 30983398 (-)
G128376 NA non-coding upstream 98449 31057167 ~ 31064131 (-)
G128396 NA non-coding upstream 249010 31207728 ~ 31274045 (-)
G128410 NA non-coding upstream 390568 31349286 ~ 31350686 (-)
kcnh3 LOC102215587,LOC101479217,LOC102787819,LOC100702937,LOC102305604 other downstream 678411 30100506 ~ 30279530 (-)
G128026 LOC103372056,LOC102784025 other downstream 1174736 29781954 ~ 29783205 (-)
G128025 plcl1 other downstream 1180508 29777040 ~ 29777433 (-)
G127923 LOC103391627,LOC101464856 other downstream 1564798 29387976 ~ 29393143 (-)
G128435 NA other upstream 530304 31489022 ~ 31491705 (-)
LOC120569384 rps24,LOC102780737 other upstream 924011 31882729 ~ 31936558 (-)
rubcnl NA other upstream 1921548 32880266 ~ 32929852 (-)
G128629 lrch1 other upstream 1983093 32941811 ~ 32942383 (-)
G128731 NA other upstream 2255389 33214107 ~ 33252272 (-)

Expression


Co-expression Network