LOC120569690


Basic Information

Item Value
gene id LOC120569690
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 31399019 ~ 31405377 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817700.1
TTCTGCACAGTAAAAGGGAAGGGGTTGACCACAGCTTTAAGTTTTCTCTTTATAACACCAACACATTCTGCACTTCAGCATTTCTCGGTATACTTTCCGCAGCACCGCTGGGGAGAGGAAACAAAAGGAAGACCCTACGCAGTTATGCTCATATTTGGACTGAGAGATAGACAGCTGCAGAAAGTTGAACACACAATGACTGAAGGAAAGGGTCGAGCACTTTATGAGGGTCGCAAATTTTGGATAGTTTGTCCTACACATTAAACTCAaaagggggtggtgggggggagaATACACTGGAGTGACTCTGATGGGAAGGAAAGGACTGCGAGAAGTGATCCTCCAACAGAGTTTGTGCGCAAGAAGAAACAAGAGCAAACATCCGTTAATGGACTTCAATGACTCGGACTGAGGATCGCAAAAACCACCATGACTAAAAACATCTCCACTCCGTATGCCACAACCACCTTCCAGACTCCCAACAGCTCCCTTTGTCTCACAGAGAGCAGCGAGATGAACTTCACCGCGAACAACCAAACCTGTCTGAACGACGGCACGCTGCGGAGCCTGCTGGCGGTGTTCTACACTGTAATCTTCGTCGTGGGTCTCGTTGGGAACCTGGTGGCTCTGTGGGTTTTCTTCTTCGTCGACTCTAAGAAGAACTCGGTGCGGGTCTTTCTCATAAACACAGCTTTCGCGGACCTGCTGCTGGTGGTGTGTCTGCCGTTCAAGATACTCTACTACAGCCGCGGAAGCGTCTGGACGCTGGGTCCCACGCTGTGTAAAGTCGTGGGCAACCTCTTTTACATGAACATGTACATCAGTGTCACGGTGCTGGGGCTGATCAGCGTGGACCGCTACATGAAGATCCATCACGGCGCGCGGAGTCAGCACAGACTGCGGTCCACAAAGTGGAGCACCGCGCTCTGCGCCGTTGTCTGGATTGTGGCCTTCGCTGTGATTTTGTTGTTCCTGGTGTCCAAGAATCACCTACAGCAGGACAGGTGTTTCCACTACAAGCAGCTCCTTGATGCAAAGTGGAAAGCCTACATCAACATCTCAGTGCTGGTCTTCTTCTGGCTCGTCTTCGTCGCTCTGATGGTGTCTTACGGAAAGATCGCCCTCAAGCTTCGGAGGACGTCACAAGAGAAGCCCGACCTGCCCAACGCGTCCCGCTATGCCCGAACTGCCAGGAAGTCCTtcttcatcctcttcctcttcacCGTGTGCTTCGTCCCCTATCACACGGTCAGGGTGTTCTACATCGTAACGCAGATCACACACACGTCGTGTTTCTGGCAGGGCGTCGCCGACAAAGCCAACGAGCTGGCTTTGCTGCTTTCAGCCCTCAACAGCTGCCTGGATCCGGTCATGTTCTTCCTCTTGTCCTCGTCGGTGAGGAAGGAGGTGCTGCGCTTGGTGGGCAACGTGTGCTGTGCGCCAGATTTGGCTGGAGTGAGCGGGAGCAGCTCCACGGCGGAGCAGGACGGCAAGACCAGCAGGACGGACAGGGGACAGGCTAACGTCAGCTATAGCAGCCATTTGAGGGAGAGGACGGTTACTGAATTCTGCCAGGCTGGTATGTAAAGCTACTCCGAGACACGGAGCCTCCATCTTTTCCAAAGGACGACATGACAGTAGTCTACATCGACAAGGTTTCACTTCCGGggttgctccggtgccgccggaaatccagccggatgtccctcatattggccggatgtccgtccccttcctctttctttgtgttggcgttctaac

Function

GO: NA

KEGG:

id description
ko04640 Hematopoietic cell lineage
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817700.1 True 1761 mRNA 0.53 3 31399019 31405377

Neighbor

gene id symbol gene type direction distance location
LOC120569688 NA coding downstream 3892 31390380 ~ 31395127 (-)
kdm6a kdm6a coding downstream 344808 30985826 ~ 31054211 (-)
ccdc80 LOC103363469 coding downstream 599378 30776319 ~ 30799641 (-)
f5 NA coding downstream 646627 30726939 ~ 30752392 (-)
rgcc rgcc,LOC103363473,LOC104939188 coding downstream 679568 30710701 ~ 30719451 (-)
nyx nyx,LOC102775957 coding upstream 98814 31504191 ~ 31516333 (-)
ddx3xa ddx3x,LOC104933609,LOC101467955,LOC102776245 coding upstream 118108 31523485 ~ 31543222 (-)
nup35 NA coding upstream 144219 31549596 ~ 31557938 (-)
frzb frzb,LOC102778849 coding upstream 197516 31602893 ~ 31626270 (-)
LOC120570281 NA coding upstream 597079 32002456 ~ 32003492 (-)
G128410 NA non-coding downstream 48333 31349286 ~ 31350686 (-)
G128396 NA non-coding downstream 124974 31207728 ~ 31274045 (-)
G128376 NA non-coding downstream 334888 31057167 ~ 31064131 (-)
G128292 NA non-coding downstream 415621 30983121 ~ 30983398 (-)
G128288 NA non-coding downstream 430158 30968630 ~ 30968861 (-)
G128426 NA non-coding upstream 74442 31479819 ~ 31483858 (-)
G128445 NA non-coding upstream 145093 31550470 ~ 31551130 (-)
G128463 NA non-coding upstream 312726 31718103 ~ 31814545 (-)
G128464 NA non-coding upstream 326081 31731458 ~ 31731988 (-)
G128466 NA non-coding upstream 371475 31776852 ~ 31777543 (-)
kcnh3 LOC102215587,LOC101479217,LOC102787819,LOC100702937,LOC102305604 other downstream 1119489 30100506 ~ 30279530 (-)
G128026 LOC103372056,LOC102784025 other downstream 1615814 29781954 ~ 29783205 (-)
G128025 plcl1 other downstream 1621586 29777040 ~ 29777433 (-)
G127923 LOC103391627,LOC101464856 other downstream 2005876 29387976 ~ 29393143 (-)
G128435 NA other upstream 83645 31489022 ~ 31491705 (-)
LOC120569384 rps24,LOC102780737 other upstream 477352 31882729 ~ 31936558 (-)
rubcnl NA other upstream 1474889 32880266 ~ 32929852 (-)
G128629 lrch1 other upstream 1536434 32941811 ~ 32942383 (-)
G128731 NA other upstream 1808730 33214107 ~ 33252272 (-)

Expression


Co-expression Network