LOC120569279


Basic Information

Item Value
gene id LOC120569279
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 25952306 ~ 25961182 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817095.1
CTTGTGTAGGTTTGTGTTAAGGAGTCAGACGATGTGAGTTGTCAGCTGTACAGTTCACCGTGTTACATTGGGAAACCTCAGAAATTTCCATCTCAGAGGGGTGGGAACCTTGAAAAGAGAGCACAGGTTCCCCCCTAAGCCGACTGACCACATACAGCTAGAGTCCATGCTGTCACCACGTCGTCACCGTCACACTGCCAGGATCACCCATCTCACCTGTACACCACGGTCGTCATGGTCCGCTTGGTATTGATGTTTGCTGTGGTCGTCATCGAATACGTTTATGGAAGGCTACCTCCTCTGCCCAAGAAAGGTAAGCACGAAGGCTGCTACCTGGTGTCTCCAGAGGTGAATATATTAAGATTGGAGGGCGAGGCCATAATACTCTCTTTCTCAATGTTCGAGAGAGTGCTTAAAGTACGCAAAATCGCCCCCCCAACAGCAACGTTCATCATCACCAAGGACAATGGGGCAGAGGGTGTGGCCTATCAGGGTGAAGGGCGTGTACAGCAGCGTAACAAACAGTTATGGATCCTCCCAGCTCAGGCTTCGGACTCAGGGAAATATATCTGCACGTACAGAAATGAAACCTACTGCGTAACTGGGTGTATCACGCTACAAGTGTACGAGTCCAGTTCTGTTGACATGGAGAAACTGATCCATCCATACCATGCCGTAGTGGGAGAGAGTCTGAATCTCTCGTGTCCATCTCTGAATGACttcaacaacacagacagaccggTAGAGTGGCACAAGGACTACCCCCGTCAGCTAGGCAGAGCGGGCGCCTTCCTCCAAAACAGAAGTAGACTAATAATTCCTGCGGTGAAGCGAGCCCATGCAGGCGTCTACACCTGCAAGCTCAGAGTGCTCATCAGTGGCCAGCGGTACAATGTCAGCCGAACCATCCAGCTCACTGTGGAAGGTCTAGATCCTGTAAtcactaccaccaccaccaccatcaccaccaccagtgtgcCTGACCTCTCCGTGACGTCTAACCCAGGGctaatcagcagcagcagctacagTACCGTTCACACTCCCGTGATTCAACCTCCTGTGATCGTCTCGCCGCTGAATGGAACCATTTTTGAAAGTCTGCATGGTTCGGGAGtggagctgttttgcaaggtgCTCACTGAATGTCAAATGACAGATTCCACTCTGGTCACATGGCTGGTCAATGACCAATCAGTGGAGTCCTCATACTTTGACGGACGGGCTCTGCAAGGGGGAAGGAGGGTAACCAGGGTGTCTGAAGGCTGCCAGATTGAGTTGAGGCTAGTTATTGTAGAGATAACAGACCAAGACATGAAGACTGAGCTCAAGTGTGTCACTCAGAACCAAGGAGGTAGACAGGAAGTGGTCGTGCAGCTTCAACTAGAGGACTCCACATTTACATGGCTGGTGGTAGCTGTGGTGGCCCTGTCCTGCTTCCTGACTGTAGTTTCTGTATTCCTCTATGTCCTCTTCAGACCTAAAAAGAAAATGGATTACATTCTGGCTCAGCAGAACAGCACCTTCTAAGACACTCACTCCACAAACTAAGACCTTTAATGTGTTTGCGGTTACATTAAATTAGTCATCACATgcattgtgtgcatgtgatgACATGCAGTGGCACCACAAGTCGTATTTGTTGTTCAACACTGCTTTCACAGGGATTCaatgttttactttttacttttgaaTGATATTGGACGTGTTCATGTGGCAAATTACATGCATTTGGTTATATAGTTGCAGCCACTGCAAAAGTTTTCTTTTGTACATCTATCTCATATTGGTGTGGCAGAAATATTCTGCCTAAATGTTATACATCCATGCATTTGAGCTAgaacaaaaaagataaaaaaaaatatgtattctaTTGATTATATTTAATTTGTTAATAACTTGACTgcacttttgtattcataacaaGTGCAAGAACGATGCTTGTGCATTTCCTGTGGATTTTAAAATCCCCCTGCAACAGTGGCTGGTGGCCAAAAACATTAACTTCAGGCCCTACCCTTATACAACATGAATTTCAACGTGAAgtcatttcatttgtttgttttgtctttcaaaCACTCCGTCAAATAATATACACTCAGTGGCCCCTTGAGTCAGACAATGTCAAAGGGGTTTCTTACGTTTTGTATATCCCATTTACAAACACGAAGGGGGAAGAGTATTGGAAACAGCTCAGTGAAGTCCAATTTAAAACCACTGCCTCAATGATAAACGTAAATGTTAAATGAATGTGTCGATCAAAACTCAACATTATCTTTGTAAAGGTAGACTTCACGGCTGAGCTGTTGCATTGGATTTCAATAAATTGTGTAGATGTGCCCAATAAAGTGGCTACTGAGtggctgtgtgactgtgtgtgtgtgtgactgtgtgtgtctgtctgt
>XM_039817096.1
GTGTAGGTTTGTGTTAAGGAGTCAGACGATGTGAGTTGTCAGCTGTACAGTTCACCGTGTTACATTGGGAAACCTCAGAAATTTCCATCTCAGAGGGGTGGGAACCTTGAAAAGAGAGCACAGGTTCCCCCCTAAGCCGACTGACCACATACAGCTAGAGTCCATGCTGTCACCACGTCGTCACCGTCACACTGCCAGGATCACCCATCTCACCTGTACACCACGGTCGTCATGGTCCGCTTGGTATTGATGTTTGCTGTGGTCGTCATCGAATACGTTTATGGAAGGCTACCTCCTCTGCCCAAGAAAGAAGGCTGCTACCTGGTGTCTCCAGAGGTGAATATATTAAGATTGGAGGGCGAGGCCATAATACTCTCTTTCTCAATGTTCGAGAGAGTGCTTAAAGTACGCAAAATCGCCCCCCCAACAGCAACGTTCATCATCACCAAGGACAATGGGGCAGAGGGTGTGGCCTATCAGGGTGAAGGGCGTGTACAGCAGCGTAACAAACAGTTATGGATCCTCCCAGCTCAGGCTTCGGACTCAGGGAAATATATCTGCACGTACAGAAATGAAACCTACTGCGTAACTGGGTGTATCACGCTACAAGTGTACGAGTCCAGTTCTGTTGACATGGAGAAACTGATCCATCCATACCATGCCGTAGTGGGAGAGAGTCTGAATCTCTCGTGTCCATCTCTGAATGACttcaacaacacagacagaccggTAGAGTGGCACAAGGACTACCCCCGTCAGCTAGGCAGAGCGGGCGCCTTCCTCCAAAACAGAAGTAGACTAATAATTCCTGCGGTGAAGCGAGCCCATGCAGGCGTCTACACCTGCAAGCTCAGAGTGCTCATCAGTGGCCAGCGGTACAATGTCAGCCGAACCATCCAGCTCACTGTGGAAGGTCTAGATCCTGTAAtcactaccaccaccaccaccatcaccaccaccagtgtgcCTGACCTCTCCGTGACGTCTAACCCAGGGctaatcagcagcagcagctacagTACCGTTCACACTCCCGTGATTCAACCTCCTGTGATCGTCTCGCCGCTGAATGGAACCATTTTTGAAAGTCTGCATGGTTCGGGAGtggagctgttttgcaaggtgCTCACTGAATGTCAAATGACAGATTCCACTCTGGTCACATGGCTGGTCAATGACCAATCAGTGGAGTCCTCATACTTTGACGGACGGGCTCTGCAAGGGGGAAGGAGGGTAACCAGGGTGTCTGAAGGCTGCCAGATTGAGTTGAGGCTAGTTATTGTAGAGATAACAGACCAAGACATGAAGACTGAGCTCAAGTGTGTCACTCAGAACCAAGGAGGTAGACAGGAAGTGGTCGTGCAGCTTCAACTAGAGGACTCCACATTTACATGGCTGGTGGTAGCTGTGGTGGCCCTGTCCTGCTTCCTGACTGTAGTTTCTGTATTCCTCTATGTCCTCTTCAGACCTAAAAAGAAAATGGATTACATTCTGGCTCAGCAGAACAGCACCTTCTAAGACACTCACTCCACAAACTAAGACCTTTAATGTGTTTGCGGTTACATTAAATTAGTCATCACATgcattgtgtgcatgtgatgACATGCAGTGGCACCACAAGTCGTATTTGTTGTTCAACACTGCTTTCACAGGGATTCaatgttttactttttacttttgaaTGATATTGGACGTGTTCATGTGGCAAATTACATGCATTTGGTTATATAGTTGCAGCCACTGCAAAAGTTTTCTTTTGTACATCTATCTCATATTGGTGTGGCAGAAATATTCTGCCTAAATGTTATACATCCATGCATTTGAGCTAgaacaaaaaagataaaaaaaaatatgtattctaTTGATTATATTTAATTTGTTAATAACTTGACTgcacttttgtattcataacaaGTGCAAGAACGATGCTTGTGCATTTCCTGTGGATTTTAAAATCCCCCTGCAACAGTGGCTGGTGGCCAAAAACATTAACTTCAGGCCCTACCCTTATACAACATGAATTTCAACGTGAAgtcatttcatttgtttgttttgtctttcaaaCACTCCGTCAAATAATATACACTCAGTGGCCCCTTGAGTCAGACAATGTCAAAGGGGTTTCTTACGTTTTGTATATCCCATTTACAAACACGAAGGGGGAAGAGTATTGGAAACAGCTCAGTGAAGTCCAATTTAAAACCACTGCCTCAATGATAAACGTAAATGTTAAATGAATGTGTCGATCAAAACTCAACATTATCTTTGTAAAGGTAGACTTCACGGCTGAGCTGTTGCATTGGATTTCAATAAATTGTGTAGATGTGCCCAATAAAGTGGCTACTGAGtggctgtgtgactgtgtgtgtgtgtgactgtgtgtgtctgtctgt

Function

GO: NA

KEGG:

id description
K04387 IL1R2, CD121b; interleukin 1 receptor type II

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817095.1 True 2405 mRNA 0.46 10 25952306 25961182
XM_039817096.1 False 2393 mRNA 0.46 10 25952309 25961182

Neighbor

gene id symbol gene type direction distance location
LOC120569244 map4k4,LOC107101754,LOC103370377,LOC100703199,LOC102310984,LOC101483446,LOC103134843,LOC106951384,LOC104918237,LOC106926661,LOC103391611,LOC107389642,LOC102194576,LOC102777943 coding upstream 3834 25834659 ~ 25948472 (+)
lonrf2 lonrf2,LOC100703468,LOC102778803,LOC102208940 coding upstream 129841 25805312 ~ 25822465 (+)
pdcl3 pdcl3,LOC106586481,LOC106582251 coding upstream 170391 25777784 ~ 25781915 (+)
neb neb coding upstream 208553 25677679 ~ 25743753 (+)
arl5a arl5a,LOC100697458,LOC107389652,LOC102234233 coding upstream 276162 25665946 ~ 25676144 (+)
LOC120569280 NA coding downstream 1820 25963002 ~ 25989635 (+)
LOC120569283 NA coding downstream 34402 25995584 ~ 26015815 (+)
il1rl1 NA coding downstream 66646 26027828 ~ 26074339 (+)
LOC120570670 NA coding downstream 125547 26086729 ~ 26095997 (+)
LOC120569747 NA coding downstream 138258 26099440 ~ 26127111 (+)
G127054 NA non-coding upstream 126016 25825272 ~ 25826290 (+)
G126904 NA non-coding upstream 732630 25216958 ~ 25219676 (+)
LOC120569827 NA non-coding upstream 735796 25213266 ~ 25216510 (+)
G126807 NA non-coding upstream 1068998 24882094 ~ 24883308 (+)
LOC120570481 LOC106579430,LOC106609078,LOC107088658 non-coding upstream 1099346 24849398 ~ 24852960 (+)
LOC120570231 NA non-coding downstream 120707 26081889 ~ 26084505 (+)
G127095 NA non-coding downstream 137091 26098273 ~ 26098541 (+)
G127203 NA non-coding downstream 306703 26267885 ~ 26268101 (+)
G127204 NA non-coding downstream 331261 26292443 ~ 26292789 (+)
G127209 NA non-coding downstream 391705 26352887 ~ 26356909 (+)
cacnb4a cacnb4 other upstream 287879 25630107 ~ 25664427 (+)
fzd5 LOC104950716,LOC108238837 other upstream 1557321 24372471 ~ 24394985 (+)
sestd1 sestd1 other upstream 1654088 24277157 ~ 24298218 (+)
cwc22 cwc22 other upstream 1752471 24183949 ~ 24199835 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 2852223 22978602 ~ 23100083 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 155806 26116988 ~ 26129879 (+)
mphosph8 mphosph8 other downstream 450295 26411477 ~ 26439285 (+)
zmym2 zmym2 other downstream 488261 26449443 ~ 26484088 (+)
LOC120569906 NA other downstream 752168 26713350 ~ 26717397 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other downstream 2427461 28388643 ~ 28409839 (+)

Expression


Co-expression Network