G22015


Basic Information

Item Value
gene id G22015
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 36301228 ~ 36302589 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU29966
TTTAGCTAGCATATTGATACAAAACAACATTGACAGTCTTCGTCTCAGTTACAAAATGAGACCAAAATTCAATCTGCTGGTTTTGTTCAAAAGCAACCCCTTTAATTGACAGAGGgaatacaaaaatgtattggCAGACCATGTACTCTCACAGGCTTGCAAAGAGCTGTATATTTTAAAAGTATAATTTCACTTTCAGTTCATTCACTTAATATAACATGGACATATTGCTTTGAGAGAGGCTTCCTACTATGGGATATACTCTCCAGTATATTttcctgtctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcgcctTTCTGAAAAAAATCTTACACACAAGGTCCACTTCCAAGGCTTTTGGTCCCATCATGTGATCTTCAACAGCAGATAGAGCTTTTGCAATTCATATCGGGATATGATAACTGAGCAAAATCCATCCACAGATAAAGAGCACAAGATGTGGTTGAAGTGGACAAAGTATTTCCAAGGTTTATAATAAACCTTTAAGCTCAAATAATATTGTTCCTTTTGCAGTTATTTACTGTAGGTGACACTTctgagtgtaaaaaaaatataaatgatgaACTCTTCATTTTGTGTTCAGACTTGTATCTAACCACAAGTACATGGCTCCACCACCCCCGATATTCAAAGCTAGCTTAGCTCCTTGTTGAAGGTTGTGGCATCAAACATACACCACAACATCAGACAATTGTTAATAACAGTCATACCTAATCGTTAATAACATCCATACACCTCATTTATAACAGATGTAGTGCACTCTGAtatttaaaacacaaatatagCTGCAGACAGCAACAACTGTAGTTTCATAGAACGGTGGTATGATCAAAACAGCATCTCAGCGCAACTCTCAAAATGCACTTAAAATAAAGGCCGACCAAACCAAGCATTTTCTGCCACATTCATTCTGCTTCTCCAAAATCTGAAAGAGAAAATATAAATGTTACATTGGTGGGTGCGACACACATCAATCACTGAGATGTTGCGCCTTCATTCACGCAGCAAGTTTCCACCACCAATAATAAAAGTGGgcctacatttacatttgttaaCAAGAACTGTGCACAACAGTGTGCCAGGCAGGCAGTGCAAAGGAAAAACTGCTTTCGGTCATATGTTCGTCACATAACTGCCACAGCCCCTCTATTGAGAGTCCTTTCAGTGGAGTACTTGATCTTCTCACGTCTCAGGTCTGCATCTCCGTCTGCATATGGGTATCGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29966 True 1362 lncRNA 0.37 1 36301228 36302589

Neighbor

gene id symbol gene type direction distance location
gmfg gmfg,LOC105934520,LOC107090391 coding upstream 7807 36291392 ~ 36293421 (+)
nkapd1 LOC104959953 coding upstream 332166 35965470 ~ 35969062 (+)
tmprss5 tmprss5,LOC102793298 coding upstream 356910 35937906 ~ 35944318 (+)
zbtb16b LOC104923551,LOC102781295 coding upstream 392568 35888002 ~ 35908660 (+)
ncam1b NA coding upstream 419764 35799164 ~ 35881464 (+)
tsr1 tsr1 coding downstream 25508 36328097 ~ 36338887 (+)
hic1 hic1 coding downstream 48507 36351096 ~ 36364143 (+)
rtn4rl1b rtn4rl1 coding downstream 248835 36551424 ~ 36707150 (+)
slc13a5b slc13a5 coding downstream 585310 36887899 ~ 36898206 (+)
slc47a3 LOC108246319,LOC106511364 coding downstream 600252 36902841 ~ 36909662 (+)
G21924 NA non-coding upstream 156536 36141416 ~ 36144692 (+)
G21857 LOC108276647 non-coding upstream 871767 35427007 ~ 35429461 (+)
G21841 NA non-coding upstream 886452 35368050 ~ 35414776 (+)
G21822 NA non-coding upstream 1010462 35289298 ~ 35290766 (+)
LOC120545939 NA non-coding upstream 1021632 35242747 ~ 35279596 (+)
G22016 NA non-coding downstream 722 36303311 ~ 36304077 (+)
G22018 NA non-coding downstream 4429 36307018 ~ 36310398 (+)
G22052 NA non-coding downstream 155936 36458525 ~ 36459282 (+)
G22053 NA non-coding downstream 158081 36460670 ~ 36461682 (+)
G22054 NA non-coding downstream 160254 36462843 ~ 36464592 (+)
pih1d2 pih1d2 other upstream 352428 35944437 ~ 35948800 (+)
igsf9ba igsf9b other upstream 766141 35456762 ~ 35535087 (+)
LOC120547286 mbnl1 other upstream 2381283 33843364 ~ 33919945 (+)
trim59 trim59,LOC102781275 other upstream 3027218 33262746 ~ 33274010 (+)
stx1a stx1a,LOC102292079,LOC102198818,LOC102795677,LOC108240947 other upstream 3171254 33041399 ~ 33129974 (+)
G22099 wdr81 other downstream 511259 36813848 ~ 36815638 (+)
G22106 wdr81 other downstream 525321 36827910 ~ 36828411 (+)
dynll2a dynll2a,LOC107554284 other downstream 961221 37263810 ~ 37269299 (+)
G22263 LOC103133141 other downstream 1138283 37440872 ~ 37443828 (+)
robo1 robo1 other downstream 1632347 37934936 ~ 38304790 (+)

Expression


Co-expression Network