G22053


Basic Information

Item Value
gene id G22053
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 36460670 ~ 36461682 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30022
gtagtttatttaaatagggacagatacaaaaaagcatagattattacagaaataacaatccgatgcctgtatcacagtgtttgtAGCCAAGGCTAATTCGCAACACCAGTCCCTAGGAGGGCTTTTAACAGTTCAAATAATAGTATACACAGTTGCTACCTCCCTGTATAAACCTGCTGACCTCAGAGGTAACATGCATCAGTCCTTTATGTCCACAAAGGGACCTTATCCAGTAACACTCGGCATTCCCTTCAACACTATCCTTGTTGGTGGCTATCCAAGTTCATCAGAATAAGAGAGAGGAACTCCGGACTGAAGTTGTgagttttctctcctcttttctacctgagagagaaaacaagaatCACATCAGCCGTCACATTCAGTCCCCACTGGGACAATTCATAAAAGGGTTTCCAATGTGTCTGTTAAACCTGTTACGGCACTATCACACCCAAATCTTTAGGCTCACTCTGAAAATGAAATGGTAATTAGTAAACAATGAGCTCATGATGACTTACTGACAAGAATAAACTATCAATACACTCATGAATATCCATTATTATCTTTCATTTACCAAATGTATCCTAATGATTTAAAACAGATTAGTAAATCATTAGTAATGGGGACATTAGATTTATTTTAAGGCAAGAAAAAAACtttcatacattttaaaacattacctGATTTAAACCTTGTgctgtccttgggtcaaatttgaccgtttaaaaaaaatgtatatcagaaatatgggtttcttttaacaaaattgcccaaaaataacacagaTGCACGTTGTAtggtatggaacccatacaacattcttTGCGGGTAAAATTtatgattacttccattgaattttgggtgtttcattcaattttatagcatttgaaaagaatgtttaaatagtttcaaaacagcatcctgactaGACTTTGACATACACCAGtatgtgattcactcaacatcatCTGATCTTAaccattagtcaaaataattcataatttattctt

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30022 True 1013 lncRNA 0.35 1 36460670 36461682

Neighbor

gene id symbol gene type direction distance location
hic1 hic1 coding upstream 96527 36351096 ~ 36364143 (+)
tsr1 tsr1 coding upstream 121783 36328097 ~ 36338887 (+)
gmfg gmfg,LOC105934520,LOC107090391 coding upstream 167249 36291392 ~ 36293421 (+)
nkapd1 LOC104959953 coding upstream 491608 35965470 ~ 35969062 (+)
tmprss5 tmprss5,LOC102793298 coding upstream 516352 35937906 ~ 35944318 (+)
rtn4rl1b rtn4rl1 coding downstream 89742 36551424 ~ 36707150 (+)
slc13a5b slc13a5 coding downstream 426217 36887899 ~ 36898206 (+)
slc47a3 LOC108246319,LOC106511364 coding downstream 441159 36902841 ~ 36909662 (+)
txndc17 txndc17 coding downstream 674410 37136092 ~ 37138177 (+)
nxn nxn coding downstream 677307 37138989 ~ 37200571 (+)
G22052 NA non-coding upstream 1388 36458525 ~ 36459282 (+)
G22018 NA non-coding upstream 150272 36307018 ~ 36310398 (+)
G22016 NA non-coding upstream 156593 36303311 ~ 36304077 (+)
G22015 NA non-coding upstream 158081 36301228 ~ 36302589 (+)
G21924 NA non-coding upstream 315978 36141416 ~ 36144692 (+)
G22054 NA non-coding downstream 1161 36462843 ~ 36464592 (+)
LOC120574216 NA non-coding downstream 17911 36479593 ~ 36480853 (+)
G22078 NA non-coding downstream 261305 36722987 ~ 36723338 (+)
G22080 NA non-coding downstream 286711 36748393 ~ 36748663 (+)
G22100 NA non-coding downstream 355297 36816979 ~ 36818697 (+)
pih1d2 pih1d2 other upstream 511870 35944437 ~ 35948800 (+)
igsf9ba igsf9b other upstream 925583 35456762 ~ 35535087 (+)
LOC120547286 mbnl1 other upstream 2540725 33843364 ~ 33919945 (+)
trim59 trim59,LOC102781275 other upstream 3186660 33262746 ~ 33274010 (+)
stx1a stx1a,LOC102292079,LOC102198818,LOC102795677,LOC108240947 other upstream 3330696 33041399 ~ 33129974 (+)
G22099 wdr81 other downstream 352166 36813848 ~ 36815638 (+)
G22106 wdr81 other downstream 366228 36827910 ~ 36828411 (+)
dynll2a dynll2a,LOC107554284 other downstream 802128 37263810 ~ 37269299 (+)
G22263 LOC103133141 other downstream 979190 37440872 ~ 37443828 (+)
robo1 robo1 other downstream 1473254 37934936 ~ 38304790 (+)

Expression


Co-expression Network