G150388


Basic Information

Item Value
gene id G150388
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1235548 ~ 1254020 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU203554
tcatggcgtctcgttcagaatctgatctcatatcggactaaaatagttcacagacacatgttactggaaacatctggagagagaaataggctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtctctctgtgtctctatgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtatctgtgtgtgtgtatctgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtatctgtgtgtgtgtgtctgtgtctgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtaggtcatGGAGTTTAAAAGGATTTCTACTCAACAACACAaacgaaagaaaagaaaaaaaaagtcaaaaaagggGAAAATCGTTTTCATTTAATGTTCCCTAAATCCAAGGGGGCGGGAC
>TU203555
cgtggacatttttgcctcgaagttgtcgagagtaagtttttttaaggaggacATGAGGGTTAAAcgtacacgcccactttctaaagccacgtggcttGTTATCTGGACGCATTTTGAGCGCGGTATACAATctcaaggtaatgtaagtcaatggaggccaaacggcgttgataaacacgctaaaaagcaagtATAGGTCTTGagaacacgccaataatggcgtaCGAACTGGCGTGCCGTACATACGCCAGTCTGTGACCACAGAGAAACGTTTTCAGCACATTCACAAACTTGATTCTCAGACTTGTTTCTCAGAGATTTTTAAAAGCTTTATTTACAACCACGTCCTCAAACATCATTTCACAAACTTCTTCTTCTGGTTTCAGGTCTTTATCACGAAAACATTCAGGATAAAGTTGtaaagaaaaggaggaggagcatTATCCAGTGTCCATTTATGTATTTATCATTCACTACTTTaactctaaacagcttcttttatttttttaataagaaaTTCAAGTATTTGTTGGAACACAAGTCAAAAAAAACCAACGAAGACAAAACATCAGTTtcatatttataataaaaacatcaaGTTTCTTTTCATAGAAGAAAAACGAGTCTAATGTCTGGCGACCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACGGTGACCATGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACAGTGAGATCTGACCACAGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACGGTGACCAACGGTGAGATCTGACCACAGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACAGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCATGGTGACCACGGTGAGATCTGACCATGGTGAGGTCATCGAGTTAAAGAAGCTCTACGCAACACAacatggtgtgtgtctgtgtgtatatctgtgtgtgtgtgtctctgtatgtgtgtgtctgtgcgtgtgtgtatatctgtgtatgaatgtgtgtgtgtgtgtgtgtgtgtatatctgtgtatttgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtatatctgtgtatgaatgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgagtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtatctgtgtgtgtgtgtctgtgtctgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtaggtcatGGAGTTTAAAAGGATTTCTACTCAACAACACAaacgaaagaaaagaaaaaaaaagtcaaaaaagggGAAAATCGTTTTCATTTAATGTTCCCTAAATCCAAGGGGGCGGGAC
>TU203556
cgtggacatttttgcctcgaagttgtcgagagtaagtttttttaaggaggacATGAGGGTTAAAcgtacacgcccactttctaaagccacgtggcttGTTATCTGGACGCATTTTGAGCGCGGTATACAATctcaaggtaatgtaagtcaatggaggccaaacggcgttgataaacacgctaaaaagcaagtATAGGTCTTGagaacacgccaataatggcgtaCGAACTGGCGTGCCGTACATACGCCAGTCTGTGACCACAGAGAAACGTTTTCAGCACATTCACAAACTTGATTCTCAGACTTGTTTCTCAGAGATTTTTAAAAGCTTTATTTACAACCACGTCCTCAAACATCATTTCACAAACTTCTTCTTCTGGTTTCAGGTCTTTATCACGAAAACATTCAGGATAAAGTTGtaaagaaaaggaggaggagcatTATCCAGTGTCCATTTATGTATTTATCATTCACTACTTTaactctaaacagcttcttttatttttttaataagaaaTTCAAGTATTTGTTGGAACACAAGTCAAAAAAAACCAACGAAGACAAAACATCAGTTtcatatttataataaaaacatcaaGTTTCTTTTCATAGAAGAAAAACGAGTCTAATGTCTGGCGACCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACGGTGACCATGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACAGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCATGGTGACCACGGTGAGATCTGACCATGGTGAGGTCATCGAGTTAAAGAAGCTCTACGCAACACAacatggtgtgtgtctgtgtgtatatctgtgtgtgtgtgtctctgtatgtgtgtgtctgtgcgtgtgtgtatatctgtgtatgaatgtgtgtgtgtgtgtgtgtgtgtatatctgtgtatttgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtatatctgtgtatgaatgtgtgtgtgtgtgtgtgtgtgtgtatctgtgtgtgtggtgttgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtatctgtgtgtgtgtatctgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtatctgtgtgtgtgtgtctgtgtctgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtaggtcatGGAGTTTAAAAGGATTTCTACTCAACAACACAaacgaaagaaaagaaaaaaaaagtcaaaaaagggGAAAATCGTTTTCATTTAATGTTCCCTAAATCCAAGGGGGCGGGAC
>TU203557
cgtggacatttttgcctcgaagttgtcgagagtaagtttttttaaggaggacATGAGGGTTAAAcgtacacgcccactttctaaagccacgtggcttGTTATCTGGACGCATTTTGAGCGCGGTATACAATctcaaggtaatgtaagtcaatggaggccaaacggcgttgataaacacgctaaaaagcaagtATAGGTCTTGagaacacgccaataatggcgtaCGAACTGGCGTGCCGTACATACGCCAGTCTGTGACCACAGAGAAACGTTTTCAGCACATTCACAAACTTGATTCTCAGACTTGTTTCTCAGAGATTTTTAAAAGCTTTATTTACAACCACGTCCTCAAACATCATTTCACAAACTTCTTCTTCTGGTTTCAGGTCTTTATCACGAAAACATTCAGGATAAAGTTGtaaagaaaaggaggaggagcatTATCCAGTGTCCATTTATGTATTTATCATTCACTACTTTaactctaaacagcttcttttatttttttaataagaaaTTCAAGTATTTGTTGGAACACAAGTCAAAAAAAACCAACGAAGACAAAACATCAGTTtcatatttataataaaaacatcaaGTTTCTTTTCATAGAAGAAAAACGAGTCTAATGTCTGGCGACCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACGGTGACCATGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACAGTGAGATCTGACCACAGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACGGTGACCAACGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACAGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCACGGTGACCACGGTGAGATCTGACCATGGTGACCACGGTGAGATCTGACCATGGTGAGGTCATCGAGTTAAAGAAGCTCTACGCAACACAacatggtgtgtgtctgtgtgtatatctgtgtgtgtgtgtctctgtatgtgtgtgtctgtgcgtgtgtgtatatctgtgtatgaatgtgtgtgtgtgtgtgtgtgtgtatatctgtgtatttgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtatatctgtgtatgaatgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgagtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtatctgtgtgtgtgtatctgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtatctgtgtgtgtgtgtctgtgtctgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtaggtcatGGAGTTTAAAAGGATTTCTACTCAACAACACAaacgaaagaaaagaaaaaaaaagtcaaaaaagggGAAAATCGTTTTCATTTAATGTTCCCTAAATCCAAGGGGGCGGGAC

Function

GO:

id name namespace
GO:0006936 muscle contraction biological_process
GO:0006941 striated muscle contraction biological_process
GO:0003012 muscle system process biological_process
GO:0060048 cardiac muscle contraction biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203554 False 513 lncRNA 0.44 2 1235548 1254020
TU203555 True 1995 lncRNA 0.47 2 1251797 1254020
TU203556 False 1829 TUCP 0.46 4 1251797 1254020
TU203557 False 1963 TUCP 0.46 3 1251797 1254020

Neighbor

gene id symbol gene type direction distance location
LOC120573839 NA coding upstream 128252 1068480 ~ 1107296 (+)
LOC120573835 NA coding upstream 172955 1033169 ~ 1062593 (+)
LOC120573938 NA coding upstream 268583 875532 ~ 966965 (+)
LOC120573937 NA coding upstream 361163 787654 ~ 874385 (+)
LOC120573940 NA coding upstream 429264 760306 ~ 806284 (+)
LOC120573834 NA coding downstream 148962 1402982 ~ 1419898 (+)
jmjd8 jmjd8 coding downstream 231574 1485594 ~ 1498100 (+)
LOC120573865 NA coding downstream 513621 1767641 ~ 1776571 (+)
LOC120575157 gcdh,LOC102794743,LOC101471797,LOC102209187,LOC100704678 coding downstream 837457 2091477 ~ 2119123 (+)
trappc5 LOC103358680,LOC104930124,LOC100705746 coding downstream 1199730 2453750 ~ 2459249 (+)
G150433 NA non-coding upstream 81836 1122575 ~ 1153712 (+)
G150397 NA non-coding upstream 102363 1108097 ~ 1133185 (+)
G150428 NA non-coding upstream 135917 1081881 ~ 1099631 (+)
G150426 NA non-coding upstream 154433 1079059 ~ 1081115 (+)
G150419 NA non-coding upstream 176498 1058015 ~ 1059050 (+)
G150470 NA non-coding downstream 86092 1340112 ~ 1341711 (+)
LOC120573841 NA non-coding downstream 94778 1348798 ~ 1350471 (+)
G150731 NA non-coding downstream 212697 1466717 ~ 1466931 (+)
G150734 NA non-coding downstream 215623 1469643 ~ 1469883 (+)
G150735 NA non-coding downstream 216940 1470960 ~ 1471210 (+)
G150398 NA other upstream 14725 1135209 ~ 1220823 (+)
G150394 NA other upstream 18879 1215882 ~ 1216669 (+)
G150450 NA other upstream 59766 1170293 ~ 1175782 (+)
G150304 NA other upstream 212027 979441 ~ 1023521 (+)
LOC120574276 spns1,LOC102775667 other upstream 214279 956381 ~ 1021269 (+)
G150465 LOC105897445 other downstream 30909 1284929 ~ 1308373 (+)
G150386 NA other downstream 70042 1324062 ~ 1325100 (+)
G150804 NA other downstream 507260 1761280 ~ 1768894 (+)
G150905 NA other downstream 682900 1936920 ~ 2067648 (+)
G150960 NA other downstream 894711 2148731 ~ 2216999 (+)

Expression


Co-expression Network