jmjd8 (jmjd8)


Basic Information

Item Value
gene id jmjd8
gene name jmjd8
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1485594 ~ 1498100 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825098.1
TCTCCGGTAGGAAGCGAGAAGACCATTCATTCTCAGGGATAATGCGACATATTCTCTGTATGTTCTTATACATTTAGTTAGATTTGAGTTTTCGCTGATAGAGTTTTGAATGGACTATAATTCGGCTGTGTTAACTACATGTACACGGCTTCTTCTGCTATGTTTCATCGGACTAAAGGCAGCGGAGCCGTCGGAGGACGGAGGCGGCTGGTCATCAAACTCAGATTTCCGATTAGAAGATGAAGGTCTTTGTAACATCGACGTGTTGGACGGGTCTTCACTCTCACATCAGCAGTTCATAGAGAGATACGCGTACAGCAGACCGGTGATCCTCAGAGGGCTGACCGATAACACGCGGTTCCGGTCGTTGTGCTCCAGGTCCACTTTACTAGAAGACTTTGGCGCCCGGAGAGTCCGGCTCAGCACAGCGAACACGTACTCTTACAGAAAAGTGGACGTCCCTCTGCAGGAGTACGTGGACGTGTTACTGAGGCCTCAGGCTGCAGATGCCCTCGGCAGCGagACGCTGTATTTCTTTGGAGACAACAACTTCACCGAGTGGCAGAGTTTGTTTGAGCAGTACGAGTCTCCACCGTACGTCCTGCCTCACACCAGCGGAGCGTACAGCTTCGGGATCGCAGGTCCTGGAACAGGAGTCCCCTTTCACTGGCACGGCCCCGGCTACTCCGAAGTCATCTACGGGAGGAAGCGTTGGTTCCTCTATCCGCCTGACAAGGAGCCGCACTTCCACCCGAACCGCACCACCCTGTCCTGGGTGACGGAGACATACCCCCAGCTACCGGAGGACGAGGCTCCGCTGGAGTGCACCATCAGACCGGGAGAGGTGCTGTATTTCCCCGACCGTTGGTGGCACGCCACGCTCAACCTGGACACCAGTGTCTTCATCTCCACCTTCCTCGGCTGAGCTCGCCAGCGGTTCTTTCACGGGAGGACAAACgctcaacaacaaaaagactATTTGATGTTTCAGCTGTGATTTCTGGGATCATATTTAAGTCTGAAGGACCACAGTTACATTCCCCGTTAACACTTTAACTTAGCGATATATCagcatgaaacttccccagttgattactgaCATTCAAACAACTAGTTTAGCAtgacaagttttctgaaatgttatgtttagaTATGCAAATGAGTCATTATCTTGCTAAACATACACAtgctaatttgcatacatttccagAACAGAAATGTGAATGTTGGATAAAGCCAGGTGTTTTATTGTGTGGATATATTTTCACAGAGGGGGTTTGGGGGGGTTAGGGACATCTCATCTCTCTTCTCCATTCAGCCATGTTTCTAATAATCTaacaatacaaatacacatttaatGACCAAAAGGAGCTAAAAgagacaatacacacacacagcgataAACATACATTCCTGTATTGCGTCACCTTATCATCATTTAGTTCAGTCAGCCGAACTTAAAGTCATGAAGAACAACGCACTTTCTTCAAGGAAGAAACAAGTCCAACTCAGAGGTAGAAAACAtggaacatttatttaaatcacAACATTTTCAAACATCTTTGTGCAGCAGGGGCATGTTCAGCCTCGATAAAACGTTTGTTTAAACTGAAA

Function

symbol description
jmjd8 Orthologous to human JMJD8 (jumonji domain containing 8).

NR:

description
PREDICTED: jmjC domain-containing protein 8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825098.1 True 1614 mRNA 0.47 9 1485594 1498100

Neighbor

gene id symbol gene type direction distance location
LOC120573834 NA coding upstream 65696 1402982 ~ 1419898 (+)
LOC120573839 NA coding upstream 378298 1068480 ~ 1107296 (+)
LOC120573835 NA coding upstream 423001 1033169 ~ 1062593 (+)
LOC120573938 NA coding upstream 518629 875532 ~ 966965 (+)
LOC120573937 NA coding upstream 611209 787654 ~ 874385 (+)
LOC120573865 NA coding downstream 269541 1767641 ~ 1776571 (+)
LOC120575157 gcdh,LOC102794743,LOC101471797,LOC102209187,LOC100704678 coding downstream 593377 2091477 ~ 2119123 (+)
trappc5 LOC103358680,LOC104930124,LOC100705746 coding downstream 955650 2453750 ~ 2459249 (+)
LOC120574835 mcoln1,LOC104930122,LOC101475291,LOC102295873,LOC106517836 coding downstream 963143 2461243 ~ 2493919 (+)
wu:fb95e10 NA coding downstream 1022615 2520715 ~ 2581298 (+)
G150737 NA non-coding upstream 7908 1477443 ~ 1477686 (+)
G150735 NA non-coding upstream 14384 1470960 ~ 1471210 (+)
G150734 NA non-coding upstream 15711 1469643 ~ 1469883 (+)
G150731 NA non-coding upstream 18663 1466717 ~ 1466931 (+)
LOC120573841 NA non-coding upstream 135123 1348798 ~ 1350471 (+)
G150786 NA non-coding downstream 90779 1588879 ~ 1589170 (+)
G150789 NA non-coding downstream 93089 1591189 ~ 1739823 (+)
G150800 NA non-coding downstream 183595 1681695 ~ 1684212 (+)
G150801 NA non-coding downstream 187417 1685517 ~ 1686201 (+)
G150808 NA non-coding downstream 226755 1724855 ~ 1737359 (+)
G150386 NA other upstream 160494 1324062 ~ 1325100 (+)
G150465 LOC105897445 other upstream 177221 1284929 ~ 1308373 (+)
G150388 NA other upstream 231574 1235548 ~ 1254020 (+)
G150394 NA other upstream 268925 1215882 ~ 1216669 (+)
G150450 NA other upstream 309812 1170293 ~ 1175782 (+)
G150804 NA other downstream 263180 1761280 ~ 1768894 (+)
G150905 NA other downstream 438820 1936920 ~ 2067648 (+)
G150960 NA other downstream 650631 2148731 ~ 2216999 (+)
LOC120574078 LOC103371863,LOC106930631,LOC103154952,LOC106957020,LOC105929964 other downstream 1147726 2645826 ~ 2691562 (+)
G151122 LOC103375031,LOC102776069 other downstream 1301369 2799469 ~ 2802221 (+)

Expression


Co-expression Network