G150465 (LOC105897445)


Basic Information

Item Value
gene id G150465
gene name LOC105897445
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1284929 ~ 1308373 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU203663
gaatttttttagacaattttattgccttttcagtgtttttgttgcttttttctatgatggctcaGGAATCTTTTTGcccttttttgggggctttatgaGGCTTTTCTTCtcttatcccagaatgcatgTGTGGtgtcgccagaccttcctccgcagctctgtggagaCAGATCTGGCTATGTCGCAGACACTCATGAAGATCACTTCCACTTGAATCCACTCATGCATTTGACTGCTTTTTAATACAGTAGTAACGAGGCGCTATGCACTATGCATCAAGTACAATCAGCCACAGAAAATGTGTCACCAAGGTATAGTTACTAATTACAATGGCAATTTACCTGTTTTTAAGAATTACAAATCAGCATCCAGAGACAGAGCAAAGACCATATGAAGCAGAGAAGTTATGCACATTCAATGTTCATGGAGAAACATACACCAACAACTATTAGTttagtgtatatatacatgatGGCCCATCTGAAACTCCTtgggatgtaacgatgcatcgtgAATCAGCTGATAATGGACATAAATGATAAAAGATATGAACCGGTTGAGATAAAAACTGAATTTTGATCTCCTTTAGAGTtaagattttctatttttttttttttgatattttgatgtgggatttgttttagaaaccaataaattatttttgttatttaaccctctgaggtctgagACACACAGAGGATTTTGGCAGCTCGGAAATGGTTGTCATTTGAACAAATGTAAGCAGTATTTTCAAagcatttagatttttttttctattcagcTGCAACAGCGCTcaaggaagtattcagatccttttttcaagtaaaagtactgatactactagattactgcagtaaaagtactaataccacactgtacaaatactctgttacaagttaaagtcctgcagagAAAATGTTGCTTCAGTAAAAGtctaagtatcatcaggagaatgtagttaacatattaaaacattgtagaaagtgtaaaggatccaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttgcagttGTCCATCGAATCCGATGATGACGTCCACTTCTGTCTTTTAACGGTGAGTTTTCTGATGGCTGAATAGTCCTATCCTGGAGCCACAGGTTCTATTGCAGGTAGGACATGTATATATAGTATTATGTATATATGGTATTATGTATATATGGTATTATGCATATATAGTATTATGTATATATGGTGTTGGTGTTActgggtgtgggtgtgttgcTCCGGAGCCTTCTTTGTTGTCTCCTGACTGTCCTGTCCTCCTCCAGTGCTTGGGTCCCATCTAGACATAGCTGCCGCCAGATGCTGCGATCAGCAGCCGTGTTCTCCAGGTTCCCAGGTTGGATTTTGCACCTCTTAAGCTCTGTCTTCAGTTGGTCTTTAAAGCGTTTCCTCTGGCCTCCAGCAGAGTGTTGGCCTTGGTGTGGCTGGCCATATAGCACTCTGCGGGGCAGACGGTCGTAGGGCATCCTTAGGACATGTCCCAACCAACGCAGTTGGTGCTGGATGATTGTAGCCTCAATACTCTTACAGCCTGTTCTCCTGAGGATCTCAGTGTGAGGCACTCTGTCACGCCAAGTGATTCCCAGGATGCGCTGGAGACAGCAGATGTGGAAGTGTTCCAGGGACTTGATGTGGCGGCTGTAAGTAACCCAGGCTTCACAGCTGTAGAGGAGGCTGTAAGTAACCCAGGCCTCACAGCTGTAGAGGAGGCTGTAAGTAACCCAGGCTTCACAGCTGTAGAGGAGGCTGTAAGTAACCCAGGCCTCACAGCTGTAGAGGAGGCTGTAAGGTTCTTGTTCAGAAAAACCCACCGCCGGAGTCTCCCAAAGGCAGCTGATGCTTGTTTGATTCTGTTCTGAACCTCATTGTCAATGCTATTGTCTTCAGAGATAATGCTCCCCAGGTATTTCAATGATGGAACAACTGACAGTTTCATCTGCAACACTGAAGATGGGTGGTGTGGGTGGGATGTTAGCACTCCACTGGCAGATTACCACTGTTTTGGTGGTGTTAATGGTCAACCCCATCCTGCTGTATGCCCTCACTGCTGCATTTAGGACAGGACTGGAGGTCTTGTGGAGAGTGAGATACAAGAGCGCAGTCATCTGCATACTGCAGCtcaagcagcacacacacacacacacacacacacacacagagacacacacacgcacacacacacacacacagagacacacacacacacacacacacacacacacacacacacagagacacacacgcacacacacacacacacacagacacacacacacacacacacagacacacacagacacacacacacacacacacagagacacacacacacacacacacacacacacacacacagacacacacacacacacacacagacacacacagacacacacagacacacacacacacacacacacatgttaggGTTTGTTTTCAGAAGAGATTTGAGTGAACAACGTTTCAGCTTTTGCGCCAGATGATCTCTTCCCATTGCTCTGGGACAGATGATgtcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATCTCTTCTTGTTGCTCTGGGACAGATGATgtcttcctgttgctctgggACAGATGATCTCTTCCCGTTGCTCTGGGACAGATgtcttcctgttgctctgggACAGATAATCTCTTCCCGTTGATCTTTTCCCGTTGCTCTGGGACAGATGATgtcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATGTCTTCCCGTTGCTCTGGGACAGATGATCTCTTCCCGTTGATCTTTTCCCGTTGCTCTGGGACAGATGATctcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATCTCTTCTTGTTGCTCTGGGACAGATGATgtcttcctgttgctctgggACAGATGATgtcttcctgttgctctgggACAGATGATCTCTTCCCGTTGCTCTGGGACAGATgtcttcctgttgctctgggACAGATAATCTCTTCCCGTTGATCTTTTCCCGTTGCTCTGAGACAGATGATctcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATGCCTCTCCGTTGCTCTGGGACAGATGATCTCTTCCCGTTGATCTTTCCCTTGCTCTGGGACAGATGATctcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATGTCTTCCCGTTGCTCTGGGACAGATGATctcttcctgttgctctgggACAGATGATctcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATGTCTTCCCGTTGCTCTGGGACAGATGATctcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATCTTTTCCCGTTGCTCTGGGACAGATGATctcttcctgttgctctgggACAGATGATctcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATGTCTTCCCGTTGCTCTGGGACAGATGATGTCTTCCCGTTGCTCTGGGACAGATGATCTCTTCCCGTTGATCTTTTCCCGTTGCTCTGGGACAGATGATGTCTTCCCGTTGCTCTGGGACAGATGATCTCTTCCCGTTGATCTTTTCCCGTTGCTCTGGGACAGATGATctcttcctgttgctctgggACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGATGTCTTCTTGTTGCTCTGGGACAGATGTGGGCGCCACTACACAGGAAGCTGAGTGTGTTCTGagcattttgatatgaaacacacggCGATCAGTTCTATGCAAATAGCCTAAAAAGGTGAATTTAAGAAGAGCTGTGAAATGGTGAATGGCGTGGTGAGTGGAGTGTTTCGTTACATCCCTAGAAACATGGCGTCCCTGCTCTGAAGAACCGGACCAACTGGACACTGTTAAGTAAGAAGTTAAACTCAAGTCGTGTTTTGTCTGTAGGTCAATGTCATTATCAATAAACACTAATAATATCATGGAATAGAAATGATCTAAAAACATCCAACAGCGTTACAAAATCAGGACACGCTGTGACAACGACATGATAGCAAATAGAAAGAGCTAACCGCTAAGCCACAGGaatcagaacacacacacagaggtctCCTTATGGTCTGGTCCAGCCAGTCTGTCCTGGATCTGGACTGGTCCCAAAGGGTCTCTGGTCCAGCCAGTCTTTCCTGGATCTGGACTAGTCTGTCCTGGATCTGGACTGGTCCCAAAGGGTCTCTGGTCCAGCCAGTCTGTCCTGGATCTGGACTGGTCTATTCTGGATCTGGACTGGTCCCAAAGGGTCTCTCAGAGTTCGTGGCAGGTCAGCAGTTTGACGCTGCCGATGGAGCGGGCAGTAAAAAGGTCAGAAACGGTCGTGAAACAACGCTGGGGGAGGACAGACAGCCCCccgccccccgcccccccagGTCTACATCCACTTCTGCCAGTCGGCGAAGACTCTGCAGGCACAAACAGAACAACTTTATTAAGAGGTCTCATTAAAATAGTTTAGGCTTTTATGGCATAGGGGGGCATTGTgagtgtgcaagtgtgtgtgtg
>TU203665
acagatacacaaaaccacgcacacacacacacacacagagacacacacacacacacacacacacacacacacacacacagagacacacacgcacacacacacacacacacagacacacacacacacacacacagacacacacagacacacacacacacacacacagagacacacacacacacacacacacacacacacacacagacacacacacacacacacacagacacacacagacacacacagacacacacacacacacacacacatcagtatgtcctgtatgtcccttacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacggtggagcagtatgtcctgtatgtcccttacaacacacacacacacacacaacaacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC105897445

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203663 True 4832 TUCP 0.47 2 1295618 1300758
TU203665 False 493 lncRNA 0.49 3 1284929 1308373

Neighbor

gene id symbol gene type direction distance location
LOC120573839 NA coding upstream 177633 1068480 ~ 1107296 (+)
LOC120573835 NA coding upstream 222336 1033169 ~ 1062593 (+)
LOC120573938 NA coding upstream 317964 875532 ~ 966965 (+)
LOC120573937 NA coding upstream 410544 787654 ~ 874385 (+)
LOC120573940 NA coding upstream 478645 760306 ~ 806284 (+)
LOC120573834 NA coding downstream 94609 1402982 ~ 1419898 (+)
jmjd8 jmjd8 coding downstream 177221 1485594 ~ 1498100 (+)
LOC120573865 NA coding downstream 459268 1767641 ~ 1776571 (+)
LOC120575157 gcdh,LOC102794743,LOC101471797,LOC102209187,LOC100704678 coding downstream 783104 2091477 ~ 2119123 (+)
trappc5 LOC103358680,LOC104930124,LOC100705746 coding downstream 1145377 2453750 ~ 2459249 (+)
G150433 NA non-coding upstream 131217 1122575 ~ 1153712 (+)
G150397 NA non-coding upstream 151744 1108097 ~ 1133185 (+)
G150428 NA non-coding upstream 185298 1081881 ~ 1099631 (+)
G150426 NA non-coding upstream 203814 1079059 ~ 1081115 (+)
G150419 NA non-coding upstream 225879 1058015 ~ 1059050 (+)
G150470 NA non-coding downstream 31739 1340112 ~ 1341711 (+)
LOC120573841 NA non-coding downstream 40425 1348798 ~ 1350471 (+)
G150731 NA non-coding downstream 158344 1466717 ~ 1466931 (+)
G150734 NA non-coding downstream 161270 1469643 ~ 1469883 (+)
G150735 NA non-coding downstream 162587 1470960 ~ 1471210 (+)
G150388 NA other upstream 30909 1235548 ~ 1254020 (+)
G150398 NA other upstream 64106 1135209 ~ 1220823 (+)
G150394 NA other upstream 68260 1215882 ~ 1216669 (+)
G150450 NA other upstream 109147 1170293 ~ 1175782 (+)
G150304 NA other upstream 261408 979441 ~ 1023521 (+)
G150386 NA other downstream 15689 1324062 ~ 1325100 (+)
G150804 NA other downstream 452907 1761280 ~ 1768894 (+)
G150905 NA other downstream 628547 1936920 ~ 2067648 (+)
G150960 NA other downstream 840358 2148731 ~ 2216999 (+)
LOC120574078 LOC103371863,LOC106930631,LOC103154952,LOC106957020,LOC105929964 other downstream 1337453 2645826 ~ 2691562 (+)

Expression


Co-expression Network