G159625


Basic Information

Item Value
gene id G159625
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 31517123 ~ 31528560 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU216288
accagctattaggataactgaaataaaaccatgccagtctctaggtatggtgaagggtttgtgatgatgtggggggggggctattttgattccaaaggccaagggaactttatcaggatgcatagtatcctggatccatggaataactggcctttaaaaataaacatctgcctgcctctatgggaatttaacataggggtgtgtatacttatgccccctgtattttaaggaagaacatttatttatttacgatacattattcattcacaaagataaTTGCTGTCCTTAAAGGATGGATTTTCAGAGCAACCCAGACCTGAAAGCAAAACATCATGTTGATTCTGACACACAGAAGGACAATCAGAATTCTTTATAAAACTGATATTACTGTATACAGTGGTAGCCTAGACTACTGCATCTGTTGGCCTGTGTtgtgctgcatgtgtgtgtgtgtgtgtatgtatgtgtgtgcgtatttAACACCACCCACATTTCATGGTTCAAATGAAAACACCATTTTCTTCGATATTCAGTTTTTTGGCTTCAATTTGCAGATGTTTGCTGCAGACATCTgcatttgctttgtttttgtctattcttttttttattttattttttagattatCCTTAGATTGATATGACTATGTTTCCTTAAATAGATTGTtgccatatttatttattttttttagcatttgtaACATTTGGGCGGAAAAGTTCGTCAAGTATAAAACGGTGTcatttcttcttattttttttaattgacacATCAGCAATCTGCAAAAACAGCTGAAATAAATCCTACAGTCAAATTCTGTTAAAGTGAAAGCTCCTGcttcaccaaaataaaagcaatagaTTATGGATCACCAAATCAGGCTTCCAGTATTTGAACAGATTACTTTGGTGTAACAGCTGTCCTTTACAGAAGCACAGCTGGATATTGAGACCTGAGTCTTTGCTTCTCCCCATTTCCTGATGTCATTTGGCCTGTTAAATGACAAACCTTCATGACTGTGAACTAACATCACTCTccaaccaaataaataaatgacatgtcacacacacaatgtaacaaaaatgcCATAACACAGAAAGAAAATCTAGCTGGTTAATTGCTATAAAGCAGCCTATTGGCCAACAGGCTTGTAACGGCCTTCCCTTTAGTCTGTTACTATAATAAAAAATAGCTTTGGGACTAaatatttttatctattttttcatGAGAATCCTAAATGCGTCTGGTCCGAGTCATTTCAAAATGGACCATTTGATCTGCTCTTTGGCCGACTGCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216288 True 1294 lncRNA 0.36 2 31517123 31528560

Neighbor

gene id symbol gene type direction distance location
LOC120575041 NA coding upstream 88672 31407046 ~ 31428451 (+)
igf2bp1 LOC101483847,LOC103154378,LOC105938751 coding upstream 126151 31327584 ~ 31390972 (+)
LOC120575055 LOC103360074,LOC103468195 coding upstream 212171 31289703 ~ 31304952 (+)
LOC120575293 LOC104935253,LOC103360075 coding upstream 243453 31252481 ~ 31273670 (+)
LOC120575058 LOC104935253,LOC103360075 coding upstream 277959 31218916 ~ 31239164 (+)
praf2 LOC104927735,LOC102206721,LOC102306087,LOC101484845,LOC102800120,LOC100710581 coding downstream 29205 31557765 ~ 31563792 (+)
LOC120574950 NA coding downstream 38327 31566887 ~ 31590536 (+)
trnav-uac_16 NA coding downstream 48463 31577023 ~ 31577095 (+)
trnav-uac_17 NA coding downstream 49818 31578378 ~ 31578450 (+)
trnav-uac_18 NA coding downstream 51173 31579733 ~ 31579805 (+)
G159606 NA non-coding upstream 84385 31431417 ~ 31432738 (+)
G159602 NA non-coding upstream 87843 31428770 ~ 31429280 (+)
G159561 NA non-coding upstream 117361 31349399 ~ 31399762 (+)
LOC120575063 NA non-coding upstream 194752 31318018 ~ 31322371 (+)
LOC120575064 NA non-coding upstream 199284 31313393 ~ 31317839 (+)
G159637 NA non-coding downstream 62215 31590775 ~ 31591227 (+)
G159640 NA non-coding downstream 64979 31593539 ~ 31593772 (+)
G159642 NA non-coding downstream 74622 31603182 ~ 31607823 (+)
G159644 NA non-coding downstream 84301 31612861 ~ 31613120 (+)
G159670 NA non-coding downstream 365302 31893862 ~ 31894149 (+)
G159484 csnk1d,LOC106596082,LOC106595407,LOC103154369 other upstream 358682 31152559 ~ 31158441 (+)
mpp2a mpp2,LOC101475212,LOC100701914 other upstream 1033410 30465788 ~ 30483713 (+)
LOC120575288 NA other upstream 1213571 30240310 ~ 30303552 (+)
LOC120574203 NA other upstream 1270230 30232704 ~ 30246893 (+)
G159073 hdac5 other upstream 2045524 29468925 ~ 29471599 (+)
G159833 NA other downstream 903189 32431749 ~ 32445464 (+)
LOC120574088 NA other downstream 935802 32464362 ~ 32465533 (+)
G159938 NA other downstream 1633835 33162395 ~ 33162811 (+)
LOC120574300 NA other downstream 1778893 33307453 ~ 33311605 (+)
LOC120574293 NA other downstream 1934695 33463255 ~ 33543161 (+)

Expression


Co-expression Network