igf2bp1 (LOC101483847,LOC103154378,LOC105938751)


Basic Information

Item Value
gene id igf2bp1
gene name LOC101483847,LOC103154378,LOC105938751
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 31327584 ~ 31390972 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825635.1
tgctgcggAGAATTAGCCTACCACTTTTTTCgatttatattcttttttttttttttagatctgcGTTTTCGGATAGCATATTCTTGCCCTCTACTGTGATTTCCACTTTCAGTTAGTGTGGCAAGTGTGACAATATCTTGTTGCGCTATAAGCAAATTTAGCAGataaactttttttgttttttgttgctggCTTCAATTTTAGTTATTCCGGGCTtcgtatttttttattttttgcgtTTTTGGACTTGGGAAAAACAATTTCCACCATGCACAAGCTATACATTGGGAATCTAGGCGACAGCGTGACTGCCGAGGACTTAGGAAAAACCTTTGACGACCACAAGATCCCATACTCCGGACAGTTTCTAATGAAAACCGGCTATGCGTTTGTGGATTGTCCGGACGATCAGTGGGCCATAAAGGCTATCGAGACGTTTTCTGgtaAAGTGGAACTTCAAGGGAAACGTATTGAGGTCGAGCACTCCGTCCCCAAGAAGCAAAGGACCAGGAAACTGCAGATCAGAAACATTCCACCTCACCTGCAGTGGGAGgTGCTGGATGGTCTGTTGGCTCAGTGTGGAACCGTAGAGAACTGTGAACAAGTGAACACAGACAGTGAAACTGCAGTGGTTAACGTCACATATGCATCCCGGGAGCATGCCAGGCAAGCCATCCAGAAGCTGAATGGATACCAGTTTGAAAACAACGCCCTGCGCGTCTCCTACATCCCCGACGAGAACTCCGAGCTGGAGGGAGGCCAGCGGGGGCCCGATAATGGCCGGCGCGGTTACGGGCCTCGCGGCGGGCCTCGCGGCGGCTCCCCGAGCTCCGGGATGCCCTCCAAACCTCCACACGCCGACATCCCTCTGAGACTGCTGGTATCCACACAGTACGTCGGAGCCATCATTGGCAAGGAGGGAGCCACCATTCGCAACATCAccaagcagacacagagcaaGATTGACGTGCACCGCAAGGAGAACGCAGGAGCTGCCGAGAAGCCGATCAGCATCCACTCGACCCCCGAGGGCTGCTCAGCCGCCTGCCGCATGATCCTGGACATCATGCACCAGGAGGCTAAAGACACCAAGACTGCCGACGAGGTTCCTCTCAAGATTCTGGCTCACAACAACTTTGTCGGACGCCTGATCGGGAAGGAGGGACGCAACTTGAAAAAAGTTGAACAGGACACAGACACCAAGATCACCATCTCCccTCTTCAGGACCTGACACTGTACAATCCAGAGAGAACCATCACAGTCAAAGGCTCGATCGAAGCCTGCTGCCATGCCGAGGTGGAGGTGATGAAGAAGGTCCGAGAGGCCTACGAGAACGACATCGCTGCCATGAATCAACAGACCCACCTGATCCCAGGGCTCAACCTCGGTGCTCTTGGCctcttcccctcctcctccaatATGCCCCCACCCCCTCCTGGAAACGCATCCGGTAGTGCCCCCTATGGTTGCTTCGGGgctCCAGAGCAGGAGACGGTCCATGTGTACATCCCAGCACAGGCAGTGGGAGCCATCATTGGAAAGAAAGGACAGCACATCAAACAGCTGAGCCGCTTCGCTGGGGCCTCCATCAAGATCGCCCCGGCTGAATCTCCAGACTCCAAAATGAGGATGGTGATAGTGACCGGACCCCCCGAGGCTCAGTTTAAGGCTCAGGGCAGAATCTATGGCAAACTGAAGGAGGAGAACTTCTTTGGGCCCAAGGAGGAGGTCAAACTGGAGACTCACATCAAGATGGCCGCTGCGGCTGCAGGCAGGGTCATTGGCAAGGGAGGCAAGACGGTGAATGAGCTGCAGAACCTGACAGCGGCCGAGGTGGTGGTCCCCAGGGAACAGACCCCAGATGAAAATGACCAGGTCATCGTCAAGATCAACGGACACTTCTATGCCAGCCAGTTGGCTCAGAGGAAGATCCGGGACATCCTGACTCAGGTCAAACAGCCACAGAAAGGCGGCATGGGCCCGGGCCCGGGCCCTAACCCCCAGGGCTTTACAGAGATGGGCAGCCCCACGCAGGGACTGAGTCAGGAGAACCAGCCGCGCAGGAAGTGAGGGCCCCGCACCTTCCTCACATGCCGTGGGGGCCCCTGCCTgacggacggacagacagacggacagacacgCACGGacggatagacagacagacggacggaTACAGGAGAGCGACACACGGACCCAGCGATAGACAGGGAGAGATACAAAGAGGGAGGGAGTACGCCCGACAGCCAGAGAAAAAGATCGGCGTTAAAAAGAGCGGAAGAGAGAAGATGAATCAAATCAAAAGatgaaatgaattaaaaaacaaaaaaaaaaa
>XM_039825637.1
tgctgcggAGAATTAGCCTACCACTTTTTTCgatttatattcttttttttttttttagatctgcGTTTTCGGATAGCATATTCTTGCCCTCTACTGTGATTTCCACTTTCAGTTAGTGTGGCAAGTGTGACAATATCTTGTTGCGCTATAAGCAAATTTAGCAGataaactttttttgttttttgttgctggCTTCAATTTTAGTTATTCCGGGCTtcgtatttttttattttttgcgtTTTTGGACTTGGGAAAAACAATTTCCACCATGCACAAGCTATACATTGGGAATCTAGGCGACAGCGTGACTGCCGAGGACTTAGGAAAAACCTTTGACGACCACAAGATCCCATACTCCGGACAGTTTCTAATGAAAACCGGCTATGCGTTTGTGGATTGTCCGGACGATCAGTGGGCCATAAAGGCTATCGAGACGTTTTCTGgtaAAGTGGAACTTCAAGGGAAACGTATTGAGGTCGAGCACTCCGTCCCCAAGAAGCAAAGGACCAGGAAACTGCAGATCAGAAACATTCCACCTCACCTGCAGTGGGAGgTGCTGGATGGTCTGTTGGCTCAGTGTGGAACCGTAGAGAACTGTGAACAAGTGAACACAGACAGTGAAACTGCAGTGGTTAACGTCACATATGCATCCCGGGAGCATGCCAGGCAAGCCATCCAGAAGCTGAATGGATACCAGTTTGAAAACAACGCCCTGCGCGTCTCCTACATCCCCGACGAGAACTCCGAGCTGGAGGGAGGCCAGCGGGGGCCCGATAATGGCCGGCGCGGTTACGGGCCTCGCGGCGGGCCTCGCGGCGGCTCCCCGAGCTCCGGGATGCCCTCCAAACCTCCACACGCCGACATCCCTCTGAGACTGCTGGTATCCACACAGTACGTCGGAGCCATCATTGGCAAGGAGGGAGCCACCATTCGCAACATCAccaagcagacacagagcaaGATTGACGTGCACCGCAAGGAGAACGCAGGAGCTGCCGAGAAGCCGATCAGCATCCACTCGACCCCCGAGGGCTGCTCAGCCGCCTGCCGCATGATCCTGGACATCATGCACCAGGAGGCTAAAGACACCAAGACTGCCGACGAGGTTCCTCTCAAGATTCTGGCTCACAACAACTTTGTCGGACGCCTGATCGGGAAGGAGGGACGCAACTTGAAAAAAGTTGAACAGGACACAGACACCAAGATCACCATCTCCccTCTTCAGGACCTGACACTGTACAATCCAGAGAGAACCATCACAGTCAAAGGCTCGATCGAAGCCTGCTGCCATGCCGAGGTGGAGGTGATGAAGAAGGTCCGAGAGGCCTACGAGAACGACATCGCTGCCATGAATACCCACCTGATCCCAGGGCTCAACCTCGGTGCTCTTGGCctcttcccctcctcctccaatATGCCCCCACCCCCTCCTGGAAACGCATCCGGTAGTGCCCCCTATGGTTGCTTCGGGgctCCAGAGCAGGAGACGGTCCATGTGTACATCCCAGCACAGGCAGTGGGAGCCATCATTGGAAAGAAAGGACAGCACATCAAACAGCTGAGCCGCTTCGCTGGGGCCTCCATCAAGATCGCCCCGGCTGAATCTCCAGACTCCAAAATGAGGATGGTGATAGTGACCGGACCCCCCGAGGCTCAGTTTAAGGCTCAGGGCAGAATCTATGGCAAACTGAAGGAGGAGAACTTCTTTGGGCCCAAGGAGGAGGTCAAACTGGAGACTCACATCAAGATGGCCGCTGCGGCTGCAGGCAGGGTCATTGGCAAGGGAGGCAAGACGGTGAATGAGCTGCAGAACCTGACAGCGGCCGAGGTGGTGGTCCCCAGGGAACAGACCCCAGATGAAAATGACCAGGTCATCGTCAAGATCAACGGACACTTCTATGCCAGCCAGTTGGCTCAGAGGAAGATCCGGGACATCCTGACTCAGGTCAAACAGCCACAGAAAGGCGGCATGGGCCCGGGCCCGGGCCCTAACCCCCAGGGCTTTACAGAGATGGGCAGCCCCACGCAGGGACTGAGTCAGGAGAACCAGCCGCGCAGGAAGTGAGGGCCCCGCACCTTCCTCACATGCCGTGGGGGCCCCTGCCTgacggacggacagacagacggacagacacgCACGGacggatagacagacagacggacggaTACAGGAGAGCGACACACGGACCCAGCGATAGACAGGGAGAGATACAAAGAGGGAGGGAGTACGCCCGACAGCCAGAGAAAAAGATCGGCGTTAAAAAGAGCGGAAGAGAGAAGATGAATCAAATCAAAAGatgaaatgaattaaaaaacaaaaaaaaaaa

Function

NR:

description
insulin-like growth factor 2 mRNA-binding protein 1

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K17391 IGF2BP1; insulin-like growth factor 2 mRNA-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825635.1 True 2333 mRNA 0.54 15 31327584 31390972
XM_039825637.1 False 2327 mRNA 0.54 15 31327584 31390972

Neighbor

gene id symbol gene type direction distance location
LOC120575055 LOC103360074,LOC103468195 coding upstream 22632 31289703 ~ 31304952 (+)
LOC120575293 LOC104935253,LOC103360075 coding upstream 53914 31252481 ~ 31273670 (+)
LOC120575058 LOC104935253,LOC103360075 coding upstream 88420 31218916 ~ 31239164 (+)
coil coil coding upstream 110192 31205813 ~ 31217392 (+)
engase engase,LOC106595560 coding upstream 136547 31173890 ~ 31191037 (+)
LOC120575041 NA coding downstream 16074 31407046 ~ 31428451 (+)
trnak-cuu_7 NA coding downstream 134018 31524990 ~ 31525062 (+)
praf2 LOC104927735,LOC102206721,LOC102306087,LOC101484845,LOC102800120,LOC100710581 coding downstream 166793 31557765 ~ 31563792 (+)
LOC120574950 NA coding downstream 175915 31566887 ~ 31590536 (+)
trnav-uac_16 NA coding downstream 186051 31577023 ~ 31577095 (+)
LOC120575063 NA non-coding upstream 5213 31318018 ~ 31322371 (+)
LOC120575064 NA non-coding upstream 9745 31313393 ~ 31317839 (+)
G159470 NA non-coding upstream 259646 31067603 ~ 31067938 (+)
G159411 NA non-coding upstream 385956 30940488 ~ 30941628 (+)
G159396 NA non-coding upstream 408915 30918469 ~ 30918669 (+)
G159602 NA non-coding downstream 37798 31428770 ~ 31429280 (+)
G159606 NA non-coding downstream 40445 31431417 ~ 31432738 (+)
G159625 NA non-coding downstream 126151 31517123 ~ 31528560 (+)
G159637 NA non-coding downstream 199803 31590775 ~ 31591227 (+)
G159640 NA non-coding downstream 202567 31593539 ~ 31593772 (+)
G159484 csnk1d,LOC106596082,LOC106595407,LOC103154369 other upstream 169143 31152559 ~ 31158441 (+)
mpp2a mpp2,LOC101475212,LOC100701914 other upstream 843871 30465788 ~ 30483713 (+)
LOC120575288 NA other upstream 1024032 30240310 ~ 30303552 (+)
LOC120574203 NA other upstream 1080691 30232704 ~ 30246893 (+)
G159073 hdac5 other upstream 1855985 29468925 ~ 29471599 (+)
G159833 NA other downstream 1040777 32431749 ~ 32445464 (+)
LOC120574088 NA other downstream 1073390 32464362 ~ 32465533 (+)
G159938 NA other downstream 1771423 33162395 ~ 33162811 (+)
LOC120574300 NA other downstream 1916481 33307453 ~ 33311605 (+)
LOC120574293 NA other downstream 2072283 33463255 ~ 33543161 (+)

Expression


Co-expression Network