G160213


Basic Information

Item Value
gene id G160213
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 34003823 ~ 34004024 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU216950
ttctacttctactccgctacatttcagagagaaatattggactttttactccactacattcatctgttccagctttagttactagttactttagttactccactacattcatctgttacagctttagttactagttactgtagttactccactacattcatctgttacagctttagttactagttactgtagttactccact

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU216950 True 202 lncRNA 0.35 1 34003823 34004024

Neighbor

gene id symbol gene type direction distance location
LOC120574905 NA coding upstream 7754 33989477 ~ 33996069 (+)
LOC120575301 NA coding upstream 148935 33852359 ~ 33854888 (+)
LOC120575259 NA coding upstream 189235 33810671 ~ 33814588 (+)
LOC120573877 NA coding upstream 249486 33749667 ~ 33754337 (+)
trnap-agg_19 NA coding upstream 369685 33634065 ~ 33634138 (+)
sgf29 sgf29 coding downstream 10510 34014534 ~ 34024559 (+)
LOC120574922 NA coding downstream 166303 34170327 ~ 34173144 (+)
zgc:66474 NA coding downstream 209498 34213522 ~ 34218731 (+)
LOC120575309 LOC107740693 coding downstream 286862 34290886 ~ 34296422 (+)
LOC120574915 NA coding downstream 515300 34519324 ~ 34522700 (+)
G160212 NA non-coding upstream 3095 34000492 ~ 34000728 (+)
G160196 NA non-coding upstream 113060 33889285 ~ 33890763 (+)
G160193 NA non-coding upstream 145230 33858294 ~ 33858593 (+)
G160167 NA non-coding upstream 199975 33803316 ~ 33803848 (+)
G160164 NA non-coding upstream 220240 33776939 ~ 33783583 (+)
G160214 nupr1,LOC107395029,LOC102231895,LOC105917958,LOC107096856,LOC106535639,LOC100692788 non-coding downstream 1625 34005649 ~ 34007769 (+)
G160217 NA non-coding downstream 32752 34036776 ~ 34043047 (+)
LOC120574937 NA non-coding downstream 77718 34081742 ~ 34084121 (+)
G160239 NA non-coding downstream 146404 34150428 ~ 34151399 (+)
G160321 NA non-coding downstream 180252 34184276 ~ 34184516 (+)
LOC120574293 NA other upstream 460662 33463255 ~ 33543161 (+)
LOC120574300 NA other upstream 692218 33307453 ~ 33311605 (+)
G159938 NA other upstream 841012 33162395 ~ 33162811 (+)
LOC120574088 NA other upstream 1538290 32464362 ~ 32465533 (+)
G159833 NA other upstream 1558359 32431749 ~ 32445464 (+)
G160243 NA other downstream 163056 34167080 ~ 34167646 (+)
G160318 LOC104961098 other downstream 179075 34183099 ~ 34183661 (+)
LOC120574901 NA other downstream 845565 34849589 ~ 34928475 (+)
G160423 mvp other downstream 958076 34962100 ~ 34966949 (+)
LOC120575316 NA other downstream 1041693 35045717 ~ 35055656 (+)

Expression


Co-expression Network