trnap-agg_19


Basic Information

Item Value
gene id trnap-agg_19
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 33634065 ~ 33634138 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_884
ggctcgttggtctaggggtatgattctcgcttAGGGTGCGAGAGGTCCGGGTTCAAATCCCGGACGAGGCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_884 True 74 tRNA 0.61 1 33634065 33634138

Neighbor

gene id symbol gene type direction distance location
trnap-agg_18 NA coding upstream 14858 33619137 ~ 33619207 (+)
trnap-cgg_4 NA coding upstream 38686 33595308 ~ 33595379 (+)
LOC120575300 NA coding upstream 64938 33566470 ~ 33569127 (+)
LOC120575298 LOC106591577,LOC106596222,LOC106591186,LOC106574345,LOC106604344,LOC106574346 coding upstream 122942 33509107 ~ 33511123 (+)
LOC120574295 NA coding upstream 582049 33038717 ~ 33052016 (+)
LOC120573877 NA coding downstream 115529 33749667 ~ 33754337 (+)
LOC120575259 NA coding downstream 176533 33810671 ~ 33814588 (+)
LOC120575301 NA coding downstream 218221 33852359 ~ 33854888 (+)
LOC120574905 NA coding downstream 355339 33989477 ~ 33996069 (+)
sgf29 sgf29 coding downstream 380396 34014534 ~ 34024559 (+)
G160123 NA non-coding upstream 50784 33582603 ~ 33583281 (+)
G160121 NA non-coding upstream 68802 33564947 ~ 33565263 (+)
G160120 NA non-coding upstream 75842 33558003 ~ 33558223 (+)
G160090 NA non-coding upstream 132635 33484306 ~ 33501430 (+)
LOC120574303 NA non-coding upstream 173015 33458543 ~ 33461050 (+)
LOC120574302 NA non-coding downstream 4491 33638629 ~ 33639114 (+)
G160164 NA non-coding downstream 142801 33776939 ~ 33783583 (+)
G160167 NA non-coding downstream 169178 33803316 ~ 33803848 (+)
G160193 NA non-coding downstream 224156 33858294 ~ 33858593 (+)
G160196 NA non-coding downstream 255147 33889285 ~ 33890763 (+)
LOC120574293 NA other upstream 90904 33463255 ~ 33543161 (+)
LOC120574300 NA other upstream 322460 33307453 ~ 33311605 (+)
G159938 NA other upstream 471254 33162395 ~ 33162811 (+)
LOC120574088 NA other upstream 1168532 32464362 ~ 32465533 (+)
G159833 NA other upstream 1188601 32431749 ~ 32445464 (+)
G160243 NA other downstream 532942 34167080 ~ 34167646 (+)
G160318 LOC104961098 other downstream 548961 34183099 ~ 34183661 (+)
LOC120574901 NA other downstream 1215451 34849589 ~ 34928475 (+)
G160423 mvp other downstream 1327962 34962100 ~ 34966949 (+)
LOC120575316 NA other downstream 1411579 35045717 ~ 35055656 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) trnap-agg_28 NA coding NW_025048646.1 JAEQBD010000991.1 145054 ~ 145127 (+)