G160423 (mvp)


Basic Information

Item Value
gene id G160423
gene name mvp
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 34962100 ~ 34966949 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU217208
TCCCAGAAAGAAACTCTAATCTGCGTTTCTTGGTTTGTGTTCAGGCACGAGGCGGAGCGCCTGGAGCAGGAGGCCCGGGGCAAGCTGGAGAGGCAGAGGATCACCGACCAGGCCGAGGCCGAGAAGGCCAGGAAGGAGCTGCTGGAGCTGGAGGCTCTCAGcgcGGCGGTGGAGAGTACGGGAGCGGCCAAGGCCGAGGCTCAGTCCCGGGCCGAGGCGGCTCGTATTCAGGGAGAGGCGGCGGTCAACGAGGCCAAGCTGAAGGCCGAAGCTCAGAGGATCGAGGCGGAGGCGGAGCTCCAGCGGCTGGCGAAGGCCCGTGAGCAGGAGCTGGCCTATAAGAAGCAGATGGACGCTCTGGAGGTGGAGAAGCAGAAGAATCTGGCTCACATCGAGAGCGAGCGCTTCAGTCAGCTGGTGGAGAGTCTGGGCAGCGACACGCTGAAGGAGATGGCCAGAGCCGGGCCCGAGCTGCAGGTGAAACTGCTGCAGGCTCTGGGGCTGAAGTCGACTCTCATCACAGACGGCGCTTCTCCCATCAACCTCTTCACCACCGCCAACGGCCTGCTGGGGGCGCTGCCGGGGCCGGGACAGGgacagggacagtgaggaggaagaggaggaacagACTGTCCAAAAGTAAACCCCAACTGACACTTTAGGCCATGATCACACTCGGCGTCTTTTTTAATTTAGGGCAGAGTTTTGGTTCCAAAAATCAGCCGAGAGCGTCTTTTGTTGCTATGACAACCACTGCTACAATATACAAAGAGCGCTATGAGGAGTGACGCAAGATAAAACAAAGTCAATCGAGcaagtccctttttttttttttaaatgttcttgtcgctttttttggacatttctgtttctgacgtcaatgtttttgtctttttttttttcgaggcTTCAAAGCTAAAGAATGAACAGAGTcactttttctatgttttttgctgtattttccgacattttcttctctttttgcaACGTTTGTGTCTTTTTACCCAACTTTTctgaagagagaaaacaaagccaGTTCCCTGAACAGGAACCACCCGCTCCTATAATATAACTCGCTGTGCTCCGACTACCCTTTCttgattgttgttgttatggaaaCAACAGGTCCCGCTACTCCACCTGCCATTGGTCAGCTGTCAAAATAGCACTTTTTAAAGACGCGCTGAGCTCCAAAGTGGTGGTGGCGTTTAAAAAAAGCGCTCAAGACTTTTTTGAAAAACACGGTTTACTCCATATAGGATTATAATATAACACAGACGCCGGCAGCTTAAAAAAACAGATGCCAAGTGTGAACAAAGATTTTGTGCTTCTGACGGCCGACTTTAAATGTGCCTTTTTGATTTTAAGACACTCCATGGGTTTGTTAAAgaaccattcattcattcaaccaaCCTTTTATTCATACTTCAGGGATCATTGAGGGGCAACCCTTATTTACACACTTGCATCGAAAACAACACTGAGAAGAAGCAATACTACTAATATACCGCTGCTAAAGAAAACCCTCTGTATATGTTTGTCTCTGGAACAACATCCACACTCTGCGTCTTTAAAAATCAACTATTTGTTATATAGAAAACTCTGGGGTTTTTAAGACCTAAAACTTAAAAATGAACTGACGAGGACTAAACCAAAACAGTTCTCTGTCTCTTTCGGGACCAATTTTGCACTTTGAGCTCTCCAAATGAGAATCTGAGGTTTACTTTTGGACAGAAAACCAGGGTGACGACATGGCGTTTGTTAACATTTTAACAAAACGTCTGCTGCaaaattaagaaaatgtgccTACAAACACGTCCGACGGTTTGTTTAGTCCTATAATCTGACAGCCAAAGAGTCCTCTTCCAGCTTTGCACTACTTCCCAGAAATTGAAATAAATGGTAAATGCTGTTGACATCGCCGATGTGTGAAACTTTGTGTGCAGTAAAGCTaaaataacagcaggacagtctGGCTGTCTGTCTTTATAAAGTGCTGTTTCTAAGAACTGTGTGAAGACATTAAAATGTTGCTGCTGCCC

Function

symbol description
mvp Acts upstream of or within brain development; eye development; and neuron projection regeneration. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including digestive system; hatching gland; nervous system; periderm; and polster. Human ortholog(s) of this gene implicated in mitral valve prolapse. Orthologous to human MVP (major vault protein).

NR:

description
PREDICTED: major vault protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217208 True 2042 TUCP 0.47 4 34962100 34966949

Neighbor

gene id symbol gene type direction distance location
LOC120574908 NA coding upstream 114332 34837814 ~ 34847768 (+)
LOC120574911 LOC101470943,LOC102790796 coding upstream 133535 34819773 ~ 34828565 (+)
LOC120574909 NA coding upstream 143029 34790728 ~ 34819071 (+)
si:ch73-366l1.5 NA coding upstream 288268 34652553 ~ 34673832 (+)
jmjd6 jmjd6 coding upstream 314473 34642508 ~ 34647627 (+)
casc3 LOC106600823 coding downstream 133173 35100122 ~ 35116962 (+)
rapgefl1 rapgefl1,LOC106600822 coding downstream 158520 35125469 ~ 35161048 (+)
LOC120575436 LOC102235047,LOC107085218,LOC108249238,LOC103371580,LOC106934529,LOC106528082,LOC103146874 coding downstream 213291 35180240 ~ 35185392 (+)
LOC120573884 NA coding downstream 260287 35227236 ~ 35245200 (+)
trnas-uga_23 NA coding downstream 270347 35237296 ~ 35237377 (+)
G160468 NA non-coding upstream 28816 34930339 ~ 34933284 (+)
G160460 NA non-coding upstream 128966 34832905 ~ 34833134 (+)
G160459 NA non-coding upstream 129228 34832651 ~ 34832872 (+)
G160450 NA non-coding upstream 153437 34808131 ~ 34808663 (+)
G160449 NA non-coding upstream 154285 34807608 ~ 34807815 (+)
G160489 NA non-coding downstream 43711 35010660 ~ 35012150 (+)
LOC120574935 NA non-coding downstream 88999 35055948 ~ 35068196 (+)
G160626 NA non-coding downstream 150036 35116985 ~ 35119434 (+)
G160630 NA non-coding downstream 168108 35135057 ~ 35154370 (+)
G160631 NA non-coding downstream 197644 35164593 ~ 35170245 (+)
LOC120574901 NA other upstream 33625 34849589 ~ 34928475 (+)
G160318 LOC104961098 other upstream 778439 34183099 ~ 34183661 (+)
G160243 NA other upstream 794454 34167080 ~ 34167646 (+)
LOC120574293 NA other upstream 1418939 33463255 ~ 33543161 (+)
LOC120574300 NA other upstream 1650495 33307453 ~ 33311605 (+)
LOC120575316 NA other downstream 78768 35045717 ~ 35055656 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other downstream 659566 35626515 ~ 35648984 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other downstream 1122671 36089620 ~ 36125552 (+)
LOC120574801 NA other downstream 1502657 36469606 ~ 36475472 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 2136424 37103373 ~ 37119254 (+)

Expression


Co-expression Network