G160626


Basic Information

Item Value
gene id G160626
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 35116985 ~ 35119434 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU217495
CCAGCTTCAGCCTCACTCTGATCCCAAAACTACAGGAGCGGGATGGGAGGGTCAGTGAGGAGCTGCGGCCGGTTGTCCACGGCAACCATCCAGAGAGGGAGGGACGGGTGGACTGCAGGTGACCCTCAGCATCTCTGGTggactttttcttctctccccCCTGCCCCCGccctctttctttgtttctccTCTTTGTCTCCTCGCCTGTAGCAGCGAGGCGACATACGTGTCAAACGTCAGACTGTTCTGTTACTctgcggccgcaggtttgatcCCACCAACGTGTCTTTGAGCAAAGCTGAAAAACTGGAAAATGACGAGTTCAAACCCTTTAGAAGCATTTAAATGTCACGTCGGGACGGGCGGTGTCAAACTCCAAACGTTTGGGATCAGAGTTGAAAGCGGTAacggtattttatttttattttttttaagtttttgtccTTTCTGCACAGCGAATGGGAGTGGGACTGAACCCCGGAGAACAGCCGTTAACGGGCAATAGAAACGGTTTCTTTGTTCAGTTGACTTTGCTCTGTACTTtagccttttttctttttattctgaTAGGAAACAGGAAGTTCCTTAGTGTCATTATCCATGTAGTTGATGCAGAAAGTTGATCAAGATATGACAACATTTGATGGATGTttgagagaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttattttgaaTGAGTCGCTGTGTTACGTCACTGAGCCGGTGCTTCCTGAACACCTCCAGATGTTACAGCTGGGGGGAGTCTGttcattttggatgtttttccctccaggcaggcagagagagacagacagccgtTCTTACGTTGCTATGACTGACTTATAAATGGAAACTTAGATTTAAAAAATCTCTACTGTTCATCTGATTTATGCTCGGTTAATCTGCGCTCTCGACAGGCTGCTACCTtgattaaatgtcagaaaactaaCAAATGTTCCCGCCAGTTCATTTTCAGTTGATCTCgagactttattttattttatttttaaaaacgcggttttcaattttgacccggaatGACAAGTTGATGGATGACGgtgaagacaacacgagggttaattAAACGAGGCGTATTTTAAAACTCGGTGAAGCTGCTCGTCTCTGTTGGTTGTCTGACAGCGGCTCTTTTTCCATTTAGCAGAAAGGTGAAACTAAAAGTTGCCCAAAAGTCCGTTCTGTTAGAACCTGCTGCCGCTGCATGTTTGGAGGCGTTGTCTGTTGCTGTACATAGAAAATCTAAATGTTTATATAGAAGCTTGAAGAGATGAAATAGAGCGGTAATCATATTCTAATAAAAACTACTAGTGCTGCAGATTGAGAGCGCATCGGCAGGGACCTCGAATGTTAAACGGTGGATTTAATTTAGAGACACGGCAAAGGAGCCGCGGGGCTTTA
>TU217496
CCAGCTTCAGCCTCACTCTGATCCCAAAACTACAGGAGCGGGATGGGAGGGTCAGTGAGGAGCTGCGGCCGGTTGTCCACGGCAACCATCCAGAGAGGGAGGGACGGGTGGACTGCAGGTGACCCTCAGCATCTCTGGTggactttttcttctctccccCCTGCCCCCGccctctttctttgtttctccTCTTTGTCTCCTCGCCTGTAGCAGCGAGGCGACATACGTGTCAAACGTCAGACTGTTCTGTTACTctgcggccgcaggtttgatcCCACCAACGTGTCTTTGAGCAAAGCTGAAAAACTGGAAAATGACGAGTTCAAACCCTTTAGAAGCATTTAAATGTCACGTCGGGACGGGCGGTGTCAAACTCCAAACGTTTGGGATCAGAGTTGAAAGCGGTAacggtattttatttttattttttttaagtttttgtccTTTCTGCACAGCGAATGGGAGTGGGACTGAACCCCGGAGAACAGCCGTTAACGGGCAATAGAAACGGTTTCTTTGTTCAGTTGACTTTGCTCTGTACTTtagccttttttctttttattctgaTAGGAAACAGGAAGTTCCTTAGTGTCATTATCCATGTAGTTGATGCAGAAAGTTGATCAAGATATGACAACATTTGATGGATGTttgagagaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttattttgaaTGAGTCGCTGTGTTACGTCACTGAGCCGGTGCTTCCTGAACACCTCCAGATGTTACAGCTGGGGGGAGTCTGttcattttggatgtttttccctccaggcaggcagagagagacagacagccgtTCTTACGTTGCTATGACTGACTTATAAATGGAAACTTAGATTTAAAAAATCTCTACTGTTCATCTGATTTATGCTCGGTTAATCTGCGCTCTCGACAGGCTGCTACCTtgattaaatgtcagaaaactaaCAAATGTTCCCGCCAGTTCATTTTCAGTTGATCTCGAGACTTTATTTTCTAATAAATTTCTAAATCTAAACATCAGCGCCTGCTGGAAGTACGGCGGccgccgctacggaaaccaaaacttgcgcccGTCAAATTTGAGAACCCCGGTTCATTTTCAGTTGATCTCgagactttattttattttatttttaaaaacgcggttttcaattttgacccggaatGACAAGTTGATGGATGACGgtgaagacaacacgagggttaattAAACGAGGCGTATTTTAAAACTCGGTGAAGCTGCTCGTCTCTGTTGGTTGTCTGACAGCGGCTCTTTTTCCATTTAGCAGAAAGGTGAAACTAAAAGTTGCCCAAAAGTCCGTTCTGTTAGAACCTGCTGCCGCTGCATGTTTGGAGGCGTTGTCTGTTGCTGTACATAGAAAATCTAAATGTTTATATAGAAGCTTGAAGAGATGAAATAGAGCGGTAATCATATTCTAATAAAAACTACTAGTGCTGCAGATTGAGAGCGCATCGGCAGGGACCTCGAATGTTAAACGGTGGATTTAATTTAGAGACACGGCAAAGGAGCCGCGGGGCTTTA

Function

NR:

description
slow myosin heavy chain 3, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217495 False 1438 lncRNA 0.45 3 35116985 35119434
TU217496 True 1569 lncRNA 0.45 2 35116985 35119434

Neighbor

gene id symbol gene type direction distance location
casc3 LOC106600823 coding upstream 23 35100122 ~ 35116962 (+)
LOC120574900 NA coding upstream 130145 34706079 ~ 34986840 (+)
LOC120574908 NA coding upstream 269217 34837814 ~ 34847768 (+)
LOC120574911 LOC101470943,LOC102790796 coding upstream 288420 34819773 ~ 34828565 (+)
LOC120574909 NA coding upstream 297914 34790728 ~ 34819071 (+)
rapgefl1 rapgefl1,LOC106600822 coding downstream 6035 35125469 ~ 35161048 (+)
LOC120575436 LOC102235047,LOC107085218,LOC108249238,LOC103371580,LOC106934529,LOC106528082,LOC103146874 coding downstream 60806 35180240 ~ 35185392 (+)
LOC120573884 NA coding downstream 107802 35227236 ~ 35245200 (+)
trnas-uga_23 NA coding downstream 117862 35237296 ~ 35237377 (+)
LOC120574781 NA coding downstream 172242 35291676 ~ 35298784 (+)
LOC120574935 NA non-coding upstream 48789 35055948 ~ 35068196 (+)
G160489 NA non-coding upstream 104835 35010660 ~ 35012150 (+)
G160468 NA non-coding upstream 183701 34930339 ~ 34933284 (+)
G160460 NA non-coding upstream 283851 34832905 ~ 34833134 (+)
G160459 NA non-coding upstream 284113 34832651 ~ 34832872 (+)
G160630 NA non-coding downstream 15623 35135057 ~ 35154370 (+)
G160631 NA non-coding downstream 45159 35164593 ~ 35170245 (+)
G160647 LOC107085226,LOC102219492,LOC106934530,LOC103469014,LOC106917392 non-coding downstream 76487 35195921 ~ 35196157 (+)
G160651 NA non-coding downstream 97758 35217192 ~ 35218829 (+)
LOC120574814 NA non-coding downstream 221720 35341154 ~ 35341814 (+)
LOC120575316 NA other upstream 61329 35045717 ~ 35055656 (+)
G160423 mvp other upstream 150036 34962100 ~ 34966949 (+)
LOC120574901 NA other upstream 188510 34849589 ~ 34928475 (+)
G160318 LOC104961098 other upstream 933324 34183099 ~ 34183661 (+)
G160243 NA other upstream 949339 34167080 ~ 34167646 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other downstream 507081 35626515 ~ 35648984 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other downstream 970186 36089620 ~ 36125552 (+)
LOC120574801 NA other downstream 1350172 36469606 ~ 36475472 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 1983939 37103373 ~ 37119254 (+)
LOC120575390 NA other downstream 2814628 37934062 ~ 37956436 (+)

Expression


Co-expression Network