G160489


Basic Information

Item Value
gene id G160489
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 35010660 ~ 35012150 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU217324
GATCCATCAGAGATCAGACTGTCCCGAagctgaacccagctgtgtgtccatgaagagtgacCAGTCTATGCCTCATCCTTATAACTTCAAAGATGGACTCCACTCAGTTGATCAAAGCCTGTTTTCCTGTTCCCctttcccttgtgtgtgtgtgttgtctgtgtctgtctacaTGTCACTCAAGAGGATCTAGGTCAAGGGGCGTGGCCACTCTCACCTGCTCTGCTCCAGCCAGCTGCAGATCATTCCAGTAATCAACCAACACCCAGCTGCAGCTCATTCCAGTACTCAACCAACAGTTATCTACCCGGGCTGTTCACCTCTTCAGCGCCAGTTCGTTGCAACCATTCCTGTGGTAACGTGGCTCCACTCTGTGCTCGAGAGAATTCAGTCCTGTTACTAGCATACCTGTTGCCTCCTTTTTGCTTGTCTCACGCTTCCCATCTCTGTTCAGATCCCGCCTCTGGACCTGCTGCTTTTCGGTTCTCATCTGCCTCCTCGCTGCCTGCTCACCTCGCAACTCCGTTCTCAACCAGCCTTTCCACCAGCTCTCGTCTTCGCTGCCTGGCCACACACCCGCCGTCTGATCTCCAGCTTCGACTCCACCTGGAGCTGCTCTCCTGGCCATTCCCTCCTGCACTATCCACATTGTGTCCAATAAAACACTGCTAACTGctcatctgtgtttgtgtgcctgttcTCAGTCCTGGGTCCGACTAGAGCCTAACACTGCCGACGCTGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217324 True 745 lncRNA 0.53 2 35010660 35012150

Neighbor

gene id symbol gene type direction distance location
LOC120574900 NA coding upstream 23820 34706079 ~ 34986840 (+)
LOC120574908 NA coding upstream 162892 34837814 ~ 34847768 (+)
LOC120574911 LOC101470943,LOC102790796 coding upstream 182095 34819773 ~ 34828565 (+)
LOC120574909 NA coding upstream 191589 34790728 ~ 34819071 (+)
si:ch73-366l1.5 NA coding upstream 336828 34652553 ~ 34673832 (+)
casc3 LOC106600823 coding downstream 87972 35100122 ~ 35116962 (+)
rapgefl1 rapgefl1,LOC106600822 coding downstream 113319 35125469 ~ 35161048 (+)
LOC120575436 LOC102235047,LOC107085218,LOC108249238,LOC103371580,LOC106934529,LOC106528082,LOC103146874 coding downstream 168090 35180240 ~ 35185392 (+)
LOC120573884 NA coding downstream 215086 35227236 ~ 35245200 (+)
trnas-uga_23 NA coding downstream 225146 35237296 ~ 35237377 (+)
G160468 NA non-coding upstream 77376 34930339 ~ 34933284 (+)
G160460 NA non-coding upstream 177526 34832905 ~ 34833134 (+)
G160459 NA non-coding upstream 177788 34832651 ~ 34832872 (+)
G160450 NA non-coding upstream 201997 34808131 ~ 34808663 (+)
G160449 NA non-coding upstream 202845 34807608 ~ 34807815 (+)
LOC120574935 NA non-coding downstream 43798 35055948 ~ 35068196 (+)
G160626 NA non-coding downstream 104835 35116985 ~ 35119434 (+)
G160630 NA non-coding downstream 122907 35135057 ~ 35154370 (+)
G160631 NA non-coding downstream 152443 35164593 ~ 35170245 (+)
G160647 LOC107085226,LOC102219492,LOC106934530,LOC103469014,LOC106917392 non-coding downstream 183771 35195921 ~ 35196157 (+)
G160423 mvp other upstream 43711 34962100 ~ 34966949 (+)
LOC120574901 NA other upstream 82185 34849589 ~ 34928475 (+)
G160318 LOC104961098 other upstream 826999 34183099 ~ 34183661 (+)
G160243 NA other upstream 843014 34167080 ~ 34167646 (+)
LOC120574293 NA other upstream 1467499 33463255 ~ 33543161 (+)
LOC120575316 NA other downstream 33567 35045717 ~ 35055656 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other downstream 614365 35626515 ~ 35648984 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other downstream 1077470 36089620 ~ 36125552 (+)
LOC120574801 NA other downstream 1457456 36469606 ~ 36475472 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 2091223 37103373 ~ 37119254 (+)

Expression


Co-expression Network