LOC120574911 (LOC101470943,LOC102790796)


Basic Information

Item Value
gene id LOC120574911
gene name LOC101470943,LOC102790796
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 34819773 ~ 34828565 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825422.1
GACTgtatttggatgttaaacaggctacttagacttggcagtaatgttttaaaccccaccaagtttaaacacgagcagcacagagctgtgtgtCTGGGCAGCCAGGCTGCTTTCAGCGCCATTCATTACAGAGCTAAGAGGGTgagttgttttataaaagtgtattttttttatcttgtaaTTTTCAGGAAGCAGTCGCCGTCTTCACAACTCTGAGACAAACTGTAGCAGGCGCTATGaaccggagcaaggactaacctcgcctcataacaaggctgtgacctatatttgctcgGAACTAtgtctgcaagtccagatttacatgacgcTGATAATGATGCCATTGTGTctgcctgtaagacatattaCGAGACAGCACGCAGGAGCTTCAGGTAGAAACAACCAGGTGTGGCAtcgcgggcagaagctgtgaagagttcagctcggagtcggtcaagaagaaaagaggctgctggaagcgagacagtGCTGCCTGCGGGTGAGGTGGTATTTGGAAGTGCGCCACCATAGAAATacaggacaacgcaccacaAACGTCTGCTAAATGGACCGAATTCAGACCGAATGCTACTGGCCGCGGGTTAGACTCTGTCAGGCTGGTGAATGGGACCAGTATGTGCTCAGGCAGACTGGAGGTGAAGACTAACTAGTCTACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGCCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTGGAGGCTCCAATGAGGACCAAAGAGTTCCAGTGTGTAGGCCATGAATCTGCTCTCCTGGACTGTAGAAGCTCAGGCTCAGATAGAAACACCTGCTTACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGATGCTGTTAGGTTGGTGGGAGAAGCCAGTCGCTGTGCAGGAACACTGGAGGTGAAATATCAGGGAGAATGGAGACCAGTGAGGTACCGTCACTTTGGCTGGACCCTGAAGACATCAGATGCTGTCTGCAGAGAGTTAGACTGTCGCTCTGCTGTTTCtgtaggagagagaaaagagtccTCAGACAGACCTGTGTGGTTGATCTGGTCTGACTGTGTTAAGTCTGGATCTGCTCTGAGGGAGTGTGCAGGATCATATTATTCTTCTTCCATCCTGAATCTCACCTGCTCAGACTCTGTCTGGCTGGTGAATGGGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGCActggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCATTCCTCCAGGGGGCGCTCTACGGAGAAGTGGAGGCTACAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGGTCTCCTGGACTGTAGAAGCTCAGGCACAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagATCCATCAGATCTATCGGATCCATCTGATCCATTGGATCCATCGGACCCATCAGATCCATCGGACCCATCTGATCCATCTGATCCATCTGATCTATTGGATTCACCACCTTTTATCATCACAGTAGTCGTCCTGCTGATGTTGGTGATCACTGCCCTTTACTTCTACTACAAGGCCTGTAGGGGGAAGCAGTCAGACAGAAAGGAGGAAATTGAGCTGTACCTGCAGCTGAAGGAGGGCTGACTGAAGAGAAAGGAGCTCACAGAGCAGAGTAGCACCTCCAAGGATCAGAATATGACTATAAAAcggcatttttttaatttctgttttctcgtgattttatttgttgttataGGAAATagaaaatcaaaa
>XM_039825423.1
ttcccagtattccattaaatctcactgtaattcacctccacaccagtgtgtgcgctgttcacgccctgctggttaatctggCCCTCTTTGTCCTTCTATACTctgcccatggatgtattaagagaacccTACCCCCGCCCTCACTGCTACCATTTGAAAAAAAGCGGCGGGAGATGAGTCGGAGAGTTAGAGCAAAAGCTTCCAAAATATGGGAATACGATATTTCATGCCAACTGGTAAAAAAGTTGTCTGTacttcacttggaaacacacagaaGTTGTTCGAGATGTACGGAgcgttttttctctcctccatatcTCCTCCGGAGCtccaaacatgcacacacagaaaagaaaaagacaacGAAGCAGTCGCCGTCTTCACAACTCTGAGACAAACTGTAGCAGGCGCTATGaaccggagcaaggactaacctcgcctcataacaaggctgtgacctatatttgctcgGAACTAtgtctgcaagtccagatttacatgacgcTGATAATGATGCCATTGTGTctgcctgtaagacatattaCGAGACAGCACGCAGGAGCTTCAGGTAGAAACAACCAGGTGTGGCAtcgcgggcagaagctgtgaagagttcagctcggagtcggtcaagaagaaaagaggctgctggaagcgagacagtGCTGCCTGCGGGTGAGGTGGTATTTGGAAGTGCGCCACCATAGAAATacaggacaacgcaccacaAACGTCTGCTAAATGGACCGAATTCAGACCGAATGCTACTGGCCGCGGGTTAGACTCTGTCAGGCTGGTGAATGGGACCAGTATGTGCTCAGGCAGACTGGAGGTGAAGACTAACTAGTCTACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGCCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTGGAGGCTCCAATGAGGACCAAAGAGTTCCAGTGTGTAGGCCATGAATCTGCTCTCCTGGACTGTAGAAGCTCAGGCTCAGATAGAAACACCTGCTTACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGATGCTGTTAGGTTGGTGGGAGAAGCCAGTCGCTGTGCAGGAACACTGGAGGTGAAATATCAGGGAGAATGGAGACCAGTGAGGTACCGTCACTTTGGCTGGACCCTGAAGACATCAGATGCTGTCTGCAGAGAGTTAGACTGTCGCTCTGCTGTTTCtgtaggagagagaaaagagtccTCAGACAGACCTGTGTGGTTGATCTGGTCTGACTGTGTTAAGTCTGGATCTGCTCTGAGGGAGTGTGCAGGATCATATTATTCTTCTTCCATCCTGAATCTCACCTGCTCAGACTCTGTCTGGCTGGTGAATGGGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGCActggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCATTCCTCCAGGGGGCGCTCTACGGAGAAGTGGAGGCTACAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGGTCTCCTGGACTGTAGAAGCTCAGGCACAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagATCCATCAGATCTATCGGATCCATCTGATCCATTGGATCCATCGGACCCATCAGATCCATCGGACCCATCTGATCCATCTGATCCATCTGATCTATTGGATTCACCACCTTTTATCATCACAGTAGTCGTCCTGCTGATGTTGGTGATCACTGCCCTTTACTTCTACTACAAGGCCTGTAGGGGGAAGCAGTCAGACAGAAAGGAGGAAATTGAGCTGTACCTGCAGCTGAAGGAGGGCTGACTGAAGAGAAAGGAGCTCACAGAGCAGAGTAGCACCTCCAAGGATCAGAATATGACTATAAAAcggcatttttttaatttctgttttctcgtgattttatttgttgttataGGAAATagaaaatcaaaa
>XM_039825424.1
GACTgtatttggatgttaaacaggctacttagacttggcagtaatgttttaaaccccaccaagtttaaacacgagcagcacagagctgtgtgtCTGGGCAGCCAGGCTGCTTTCAGCGCCATTCATTACAGAGCTAAGAGGGTgagttgttttataaaagtgtattttttttatcttgtaaTTTTCAGGAAGCAGTCGCCGTCTTCACAACTCTGAGACAAACTGTAGCAGGCGCTATGaaccggagcaaggactaacctcgcctcataacaaggctgtgacctatatttgctcgGAACTAtgtctgcaagtccagatttacatgacgcTGATAATGATGCCATTctgcctgtaagacatattaCGAGACAGCACGCAGGAGCTTCAGGTAGAAACAACCAGGTGTGGCAtcgcgggcagaagctgtgaagagttcagctcggagtcggtcaagaagaaaagaggctgctggaagcgagacagtGCTGCCTGCGGGTGAGGTGGTATTTGGAAGTGCGCCACCATAGAAATacaggacaacgcaccacaAACGTCTGCTAAATGGACCGAATTCAGACCGAATGCTACTGGCCGCGGGTTAGACTCTGTCAGGCTGGTGAATGGGACCAGTATGTGCTCAGGCAGACTGGAGGTGAAGACTAACTAGTCTACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGCCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTGGAGGCTCCAATGAGGACCAAAGAGTTCCAGTGTGTAGGCCATGAATCTGCTCTCCTGGACTGTAGAAGCTCAGGCTCAGATAGAAACACCTGCTTACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGATGCTGTTAGGTTGGTGGGAGAAGCCAGTCGCTGTGCAGGAACACTGGAGGTGAAATATCAGGGAGAATGGAGACCAGTGAGGTACCGTCACTTTGGCTGGACCCTGAAGACATCAGATGCTGTCTGCAGAGAGTTAGACTGTCGCTCTGCTGTTTCtgtaggagagagaaaagagtccTCAGACAGACCTGTGTGGTTGATCTGGTCTGACTGTGTTAAGTCTGGATCTGCTCTGAGGGAGTGTGCAGGATCATATTATTCTTCTTCCATCCTGAATCTCACCTGCTCAGACTCTGTCTGGCTGGTGAATGGGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGCActggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCATTCCTCCAGGGGGCGCTCTACGGAGAAGTGGAGGCTACAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGGTCTCCTGGACTGTAGAAGCTCAGGCACAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagATCCATCAGATCTATCGGATCCATCTGATCCATTGGATCCATCGGACCCATCAGATCCATCGGACCCATCTGATCCATCTGATCCATCTGATCTATTGGATTCACCACCTTTTATCATCACAGTAGTCGTCCTGCTGATGTTGGTGATCACTGCCCTTTACTTCTACTACAAGGCCTGTAGGGGGAAGCAGTCAGACAGAAAGGAGGAAATTGAGCTGTACCTGCAGCTGAAGGAGGGCTGACTGAAGAGAAAGGAGCTCACAGAGCAGAGTAGCACCTCCAAGGATCAGAATATGACTATAAAAcggcatttttttaatttctgttttctcgtgattttatttgttgttataGGAAATagaaaatcaaaa
>XM_039825425.1
ACTgtatttggatgttaaacaggctacttagacttggcagtaatgttttaaaccccaccaagtttaaacacgagcagcacagagctgtgtgtCTGGGCAGCCAGGCTGCTTTCAGCGCCATTCATTACAGAGCTAAGAGGGTgagttgttttataaaagtgtattttttttatcttgtaaTTTTCAGGAAGCAGTCGCCGTCTTCACAACTCTGAGACAAACTGTAGCAGGCGCTATGaaccggagcaaggactaacctcgcctcataacaaggctgtgacctatatttgctcgGAACTAtgtctgcaagtccagatttacatgacgcTGATAATGATGCCATTGTGTctgcctgtaagacatattaCGAGACAGCACGCAGGAGCTTCAGGTAGAAACAACCAGGTGTGGCAtcgcgggcagaagctgtgaagagttcagctcggagtcggtcaagaagaaaagaggctgctggaagcgagacagtGCTGCCTGCGGGTGAGGTGGTATTTGGAAGTGCGCCACCATAGAAATacaggacaacgcaccacaAACGTCTGCTAAATGGACCGAATTCAGACCGAATGCTACTGGCCGCGGGTTAGACTCTGTCAGGCTGGTGAATGGGACCAGTATGTGCTCAGGCAGACTGGAGGTGAAGACTAACTAGTCTACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGCCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTGGAGGCTCCAATGAGGACCAAAGAGTTCCAGTGTGTAGGCCATGAATCTGCTCTCCTGGACTGTAGAAGCTCAGGCTCAGATAGAAACACCTGCTTACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGATGCTGTTAGGTTGGTGGGAGAAGCCAGTCGCTGTGCAGGAACACTGGAGGTGAAATATCAGGGAGAATGGAGACCAGTGAGGTACCGTCACTTTGGCTGGACCCTGAAGACATCAGATGCTGTCTGCAGAGAGTTAGACTGTCGCTCTGCTGTTTCtgtaggagagagaaaagagtccTCAGACAGACCTGTGTGGTTGATCTGGTCTGACTGTGTTAAGTCTGGATCTGCTCTGAGGGAGTGTGCAGGATCATATTATTCTTCTTCCATCCTGAATCTCACCTGCTCAGACTCTGTCTGGCTGGTGAATGGGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGCActggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCATTCCTCCAGGGGGCGCTCTACGGAGAAGTGGAGGCTACAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGGTCTCCTGGACTGTAGAAGCTCAGGCACAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagATCTATCGGATCCATCTGATCCATTGGATCCATCGGACCCATCAGATCCATCGGACCCATCTGATCCATCTGATCCATCTGATCTATTGGATTCACCACCTTTTATCATCACAGTAGTCGTCCTGCTGATGTTGGTGATCACTGCCCTTTACTTCTACTACAAGGCCTGTAGGGGGAAGCAGTCAGACAGAAAGGAGGAAATTGAGCTGTACCTGCAGCTGAAGGAGGGCTGACTGAAGAGAAAGGAGCTCACAGAGCAGAGTAGCACCTCCAAGGATCAGAATATGACTATAAAAcggcatttttttaatttctgttttctcgtgattttatttgttgttataGGAAATagaaaatcaaaa

Function

NR:

description
scavenger receptor cysteine-rich type 1 protein M160 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825422.1 False 1904 mRNA 0.50 9 34820202 34828565
XM_039825423.1 True 2080 mRNA 0.50 10 34819773 34828565
XM_039825424.1 False 1900 mRNA 0.50 9 34820202 34828565
XM_039825425.1 False 1894 mRNA 0.50 9 34820203 34828565

Neighbor

gene id symbol gene type direction distance location
LOC120574909 NA coding upstream 702 34790728 ~ 34819071 (+)
si:ch73-366l1.5 NA coding upstream 145941 34652553 ~ 34673832 (+)
jmjd6 jmjd6 coding upstream 172146 34642508 ~ 34647627 (+)
LOC120574912 NA coding upstream 215992 34593951 ~ 34603781 (+)
LOC120574921 NA coding upstream 269058 34535960 ~ 34550715 (+)
LOC120574908 NA coding downstream 9249 34837814 ~ 34847768 (+)
casc3 LOC106600823 coding downstream 271557 35100122 ~ 35116962 (+)
rapgefl1 rapgefl1,LOC106600822 coding downstream 296904 35125469 ~ 35161048 (+)
LOC120575436 LOC102235047,LOC107085218,LOC108249238,LOC103371580,LOC106934529,LOC106528082,LOC103146874 coding downstream 351675 35180240 ~ 35185392 (+)
LOC120573884 NA coding downstream 398671 35227236 ~ 35245200 (+)
G160450 NA non-coding upstream 11110 34808131 ~ 34808663 (+)
G160449 NA non-coding upstream 11958 34807608 ~ 34807815 (+)
G160437 NA non-coding upstream 30409 34768749 ~ 34789364 (+)
G160426 NA non-coding upstream 134814 34684651 ~ 34684959 (+)
G160422 NA non-coding upstream 146371 34652435 ~ 34673402 (+)
G160459 NA non-coding downstream 4086 34832651 ~ 34832872 (+)
G160460 NA non-coding downstream 4340 34832905 ~ 34833134 (+)
G160468 NA non-coding downstream 101774 34930339 ~ 34933284 (+)
G160489 NA non-coding downstream 182095 35010660 ~ 35012150 (+)
LOC120574935 NA non-coding downstream 227383 35055948 ~ 35068196 (+)
G160318 LOC104961098 other upstream 636112 34183099 ~ 34183661 (+)
G160243 NA other upstream 652127 34167080 ~ 34167646 (+)
LOC120574293 NA other upstream 1276612 33463255 ~ 33543161 (+)
LOC120574300 NA other upstream 1508168 33307453 ~ 33311605 (+)
G159938 NA other upstream 1656962 33162395 ~ 33162811 (+)
LOC120574901 NA other downstream 21024 34849589 ~ 34928475 (+)
G160423 mvp other downstream 133535 34962100 ~ 34966949 (+)
LOC120575316 NA other downstream 217152 35045717 ~ 35055656 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other downstream 797950 35626515 ~ 35648984 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other downstream 1261055 36089620 ~ 36125552 (+)

Expression


Co-expression Network