LOC120575321 (keratin,LOC103393440,LOC106904882)


Basic Information

Item Value
gene id LOC120575321
gene name keratin,LOC103393440,LOC106904882
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 35626515 ~ 35648984 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU217642
cactcctcttctctccttcccCCTGCACCGGCGAACAGACACTGCTCTTTAATCTCTCCATCATCATGACCATGGTGTACTCCTCCCGAAGCTCCATGGGCGGCGGCTTTGGCGGAGGTGGCTTCGGCGGCGGCAGCGGCTTCGGCGGTGGGGGTTttggcggcagcagcagccgaGCATCCTTCGGCGGAGGCATGAGCGCGTTCAGCATGGCAGGAGGAGCCGGAGGAAGTGGGggttgggtttcctgctttagcaatcccctcaaacacatACTGGAACTTCTTGTTTAGGTTACATTTGAGTTTACGCTTACCACCTGCAGCAAGACTTTGCTCTGCAGACAGTCAGCCAGCTCctcctgcttcattctcctcaggaagtgcagtgtgatcttTAGAAATGCCTCTCTGATGCTCCTCCTCTGATCTTCATCCTCACTGTCCAACACCTCCTCACCccccctctgactctctgagcattctgggtaatctggaATCAGAAGCTTCTGGATCTTTTTCAGGTCGTTCTTCACAAAAGTGACAATgtcctcctccag
>XM_039826037.1
tcttctctccttcccCCTGCACCGGCGAACAGACACTGCTCTTTAATCTCTCCATCATCATGACCATGGTGTACTCCTCCCGAAGCTCCATGGGCGGCGGCTTTGGCGGAGGTGGCTTCGGCGGCGGCAGCGGCTTCGGCGGTGGGGGTTttggcggcagcagcagccgaGCATCCTTCGGCGGAGGCATGAGCGCGTTCAGCATGGCAGGAGGAGCCGGAGGAAGTGGGGTCAgtATTAAGGACGCCATCCTCCTCAGAGGGACGGTCTCGCTGAGCATCGACAACGCCCAACTGGCTCAGGACGACTTCAGAATCAAGTTTGAGAATGAGCTGTCGATGCGTCAGTCTGTGGAGGCGGACATCGCCGGGCTGAAGATGGTGCTGGGAGAGCTGGGCGTCGCCAAGACCGACCTGAGCATGCAGATCGAAAGCCTGAAGGACGAGCTGGTCACCATGAAGAAGAACCACGAAGAGGACCTGATGTCCATGCGCACGCAGATGAGTGGTCAGGTGAACGTGGAGGTGGACGCCGGTCCGCAAACCGACCTCACCAAGGTCATGGAAGAGATGAGAGAACACTACGAGATGCTCGCCGCTAAGACCAACAAAGAGCTGGAGTCCTGGTTCCATTCCAAGtcGGAGATGCTCAGTAAGGAGGTGGCAACCACAGAGATGACGATCAAATCGACGGTCTCGGAGGTGAAGGAGGTGAAGAGTCAGCTTCAGGCTCTGGAGATCGAACTCCAATCACAGCACAGCATGaAAGCGTCTCTTGAAGCCACACTGGCCGACATCCAGGGCCGCTACGCCATGCAGCTGAACGGATACCAGATGATGGTGAGCGGTATGGAGGAGCAGCTGGTGCAGCTGAGGGCTGACCTGGAGCGACAGGGACAGGACTACCAGATGCTGCTGGACAtcaagaccagactggagatgGAGATCGGCGAGTACAGGAGGCTGCTGGACGGAGAGGCTGGTGGTagtggcggcggcggcggcagcgGCGGCGGatcgACAGGtttgtcctcttcctcctcctcaaccgtcatcagcagcagcaccacAGTCGTCAAAAAAGTCATCGAGGAGACCATCTGAGACCAATCATACGTCTTACCTCTGACTCGGGGGTGGAGTCAAATCTCCACTGACTCAGGAACATATAAACACACTATAAACACTCATTAAGGTATCTGATTTGGGGTCTATTCTTAATCTAAACATTGATGCATTCACACTGAATTGATTTGGGAAATCagtggcgatacccagccctagataTGACACCTCTGACATGAATCAAGGTTGCCTGAATAATGGCTGTAAAAGATCAGtgactacatttacatgcacataatattccagtttttgTCCTCATTCTGAAAAAGACAGTGTCCCTACCAAGCTGTTTCCACGGCTATAGAAAGtcaatattccactaatattcctgtttacatgacctgtgtCAAATTtgtggaatattagtgtgcatgtaaacataatcAATGAGTCAAAGATTGTCATTGTGTGATAGTTTGGGTCAGGGACAACTTTACTTCCAACAAAGCTTCTGTCTTCTTCAAGGAATAAAACTCAACTAAACTCAAA

Function

NR:

description
PREDICTED: keratin, type I cytoskeletal 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217642 False 559 TUCP 0.55 3 35626515 35648984
XM_039826037.1 True 1613 mRNA 0.52 7 35626521 35634999

Neighbor

gene id symbol gene type direction distance location
LOC120574792 NA coding upstream 33375 35586779 ~ 35593140 (+)
LOC120574796 NA coding upstream 69142 35540809 ~ 35557373 (+)
LOC120574795 NA coding upstream 91855 35530137 ~ 35534660 (+)
LOC120575320 NA coding upstream 194356 35431247 ~ 35432159 (+)
LOC120574781 NA coding upstream 327731 35291676 ~ 35298784 (+)
stx1b stx1b,LOC102220115,LOC107397241,LOC101067771,LOC107666328 coding downstream 394160 36043144 ~ 36088699 (+)
thoc6 thoc6 coding downstream 525405 36174389 ~ 36181428 (+)
LOC120574802 NA coding downstream 581110 36230094 ~ 36231842 (+)
LOC120575324 NA coding downstream 584820 36233804 ~ 36237301 (+)
LOC120575325 LOC106536055,LOC106675381,LOC108249197 coding downstream 591472 36240456 ~ 36243567 (+)
G160700 NA non-coding upstream 149446 35469539 ~ 35477069 (+)
LOC120574814 NA non-coding upstream 284701 35341154 ~ 35341814 (+)
G160651 NA non-coding upstream 407686 35217192 ~ 35218829 (+)
G160647 LOC107085226,LOC102219492,LOC106934530,LOC103469014,LOC106917392 non-coding upstream 430358 35195921 ~ 35196157 (+)
G160631 NA non-coding upstream 456270 35164593 ~ 35170245 (+)
G160691 NA non-coding downstream 17593 35666577 ~ 35691540 (+)
G160722 NA non-coding downstream 69065 35718049 ~ 35718362 (+)
G160728 NA non-coding downstream 89249 35738233 ~ 35738663 (+)
G160820 NA non-coding downstream 114391 35763375 ~ 35763865 (+)
G160835 LOC103153065,LOC106904881,LOC100711911,LOC103361487,LOC107097652 non-coding downstream 173153 35822137 ~ 35828076 (+)
LOC120575316 NA other upstream 570859 35045717 ~ 35055656 (+)
G160423 mvp other upstream 659566 34962100 ~ 34966949 (+)
LOC120574901 NA other upstream 698040 34849589 ~ 34928475 (+)
G160318 LOC104961098 other upstream 1442854 34183099 ~ 34183661 (+)
G160243 NA other upstream 1458869 34167080 ~ 34167646 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other downstream 440636 36089620 ~ 36125552 (+)
LOC120574801 NA other downstream 820622 36469606 ~ 36475472 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 1454389 37103373 ~ 37119254 (+)
LOC120575390 NA other downstream 2285078 37934062 ~ 37956436 (+)
G161714 NA other downstream 2821730 38470714 ~ 38471325 (+)

Expression


Co-expression Network