LOC120575390


Basic Information

Item Value
gene id LOC120575390
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 37934062 ~ 37956436 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826171.1
CAGACATTGACAGCTTGTTGAGAAGGTCTGCTCGCCACTCTGAGAACATTCTGGGTTAGTTTGTCAGGATGACTTCCTGTGTGTTGTCCCTCTACTTCCTGCTCTCCCTGTGTTCCTCCATCTCTGCCGACGGTCCCACCGGACTCAAAGTGAGAATCACCGACAGAGCACCGGATGTTTTGAAGTCTTTCGGTCAGGCGTATTTGAAGGAGCTGATTGGCAAACCTTTCCCAGATTTTCAGTTTAAGGGCATGAAAATGGCAAAGTGCAAGATTAAAGGGTTGACAGTGAATCATCTGGATGTGGACCGTGATAAGGTTGTTGTCAGGTTCCAGCAGGATTCAGGTCTTCAGTTTGAGTTCAGGGACCTGAACTTTACTGCAGAACTTCAACGAGAAATCAATGTGCGGGGAAAGATtgtcGACGAAGGGACGGTTAATGTTACAGGAAAAGGTGTGAGGGCCACCATTGGagtgagactgaaccaaaaccAAGGACGTCTGAGTCTCAAGATACAGAACTGTGATGTCCATGCTGACAAGATCGCCATGAAGTTCCACCAAGGACTCGGGCCTGTGCTGAACCGATTCAAAAAAGAGTTCCAGCATTTATTTAAGACCAAGgtctGTCCTGCTATTAAGAGACATGCTGTCCCTAAAGTGAACTCCATGTTGGCGAACGTCACCATGGCAATGAGTTTGAGCGAAGACCTTGGTATGAACCTGGACTACTCTCTGAGCGGAGAGGTCACGGTGACGCCAAGCAGCCTCGACGTGCCGTTCACAGGTGTGGTGTACCACGGTGACATAAGGCCTGCTTTACCAGCAGCAGGCGTACAGCCGGTGTTCACAGAAAGTAACCTGATGGCTTATGTGGGCATCTCTGAGGACCTGTTTAAAAGCGCCGCCCAGGCTCTCTACAGCCACGGGCCTTTACAACTGGACGTTCCACAGATTGGTACTATACCAAATTATGTTCTACACACTTGGGGATTACCTGAGGGTCGTGTTGAAGTTGAGCTAACTGAGGTGCCAGACATCACCATCAGTCAGGATGGACTCTCTGTCTACGTGAAGGCCATCGCCCAATCTTTAGTTAACCCAGATCTTCCGCATCTTCCCATGACGTGTCAGGTTCTTATAAATGTCGATATGGAAGGATGCCGTCTGATTCTTCAGGCTCTAAGCTCCAAGTGTAAAATTGAACCTAAAACGATATGGGGAAGATTTTTGGCGACATTTGTTGACACATCATCAAAGATTTCATCATTCATTGAGGaatggTTTGACGAAGGAGTCCTGATCCCTCTGCCTGACAGACTGGACTTCACTCAGATGAAGATCAATTATTATCCAggcttCATGGTGGTCGGGGGGGACCTGACCTATACTGTGCAGAGGGCTGTTCTgaggtccatccatccatctccaaCCATAGCTATAGATCCAGGCTCCAGCAGGAAATTCCAATCGTTCCTTTTCCTAATCCTGTTGATTTTATATATTTGGttttgtaaacgttgtttttaGGGCAGGGAGTTCCTCCGTTCTTTTTCTTCCTAAGAAATCCCTGTTGCCATGCAGGAAAAATCCTcaagatttggaaaaaaaaaacttaatcaGTCCAAACTGTGTGCTAATAg
>XM_039826172.1
CAGACATTGACAGCTTGTTGAGAAGGTCTGCTCGCCACTCTGAGAACATTCTGGGTTAGTTTGTCAGGATGACTTCCTGTGTGTTGTCCCTCTACTTCCTGCTCTCCCTGTGTTCCTCCATCTCTGCCGACGGTCCCACCGGACTCAAAGTGAGAATCACCGACAGAGCACCGGATGTTTTGAAGTCTTTCGGTCAGGCGTATTTGAAGGAGCTGATTGGCAAACCTTTCCCAGATTTTCAGTTTAAGGGCATGAAAATGGCAAAGTGCAAGATTAAAGGGTTGACAGTGAATCATCTGGATGTGGACCGTGATAAGGTTGTTGTCAGGTTCCAGCAGGATTCAGGTCTTCAGTTTGAGTTCAGGGACCTGAACTTTACTGCAGAACTTCAACGAGAAATCAATGTGCGGGGAAAGATtgtcGACGAAGGGACGGTTAATGTTACAGGAAAAGGTGTGAGGGCCACCATTGGagtgagactgaaccaaaaccAAGGACGTCTGAGTCTCAAGATACAGAACTGTGATGTCCATGCTGACAAGATCGCCATGAAGTTCCACCAAGGACTCGGGCCTGTGCTGAACCGATTCAAAAAAGAGTTCCAGCATTTATTTAAGACCAAGgtctGTCCTGCTATTAAGAGACATGCTGTCCCTAAAGTGAACTCCATGTTGGCGAACGTCACCATGGCAATGAGTTTGAGCGAAGACCTTGGTATGAACCTGGACTACTCTCTGAGCGGAGAGGTCACGGTGACGCCAAGCAGCCTCGACGTGCCGTTCACAGGTGTGGTGTACCACGGTGACATAAGGCCTGCTTTACCAGCAGCAGGCGTACAGCCGGTGTTCACAGAAAGTAACCTGATGGCTTATGTGGGCATCTCTGAGGACCTGTTTAAAAGCGCCGCCCAGGCTCTCTACAGCCACGGGCCTTTACAACTGGACGTTCCACAGATTGGTACTATACCAAATTATGTTCTACACACTTGGGGATTACCTGAGGGTCGTGTTGAAGTTGAGCTAACTGAGGTGCCAGACATCACCATCAGTCAGGATGGACTCTCTGTCTACGTGAAGGCCATCGCCCAATCTTTAGTTAACCCAGATCTTCCGCATCTTCCCATGACGTGTCAGGTTCTTATAAATGTCGATATGGAAGGATGCCGTCTGATTCTTCAGGCTCTAAGCTCCAAGTGTAAAATTGAACCTAAAACGATATGGGGAAGATTTTTGTcctatctgtttgtgtgtgtgttgactctGTGCAGGCGACATTTGTTGACACATCATCAAAGATTTCATCATTCATTGAGGGTAAGTACTGATACacagtcagaaacacacacttaaACTCACTTAAAGGGTActatacacgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgt
>XM_039826173.1
CAGACATTGACAGCTTGTTGAGAAGGTCTGCTCGCCACTCTGAGAACATTCTGGGTTAGTTTGTCAGGATGACTTCCTGTGTGTTGTCCCTCTACTTCCTGCTCTCCCTGTGTTCCTCCATCTCTGCCGACGGTCCCACCGGACTCAAAGTGAGAATCACCGACAGAGCACCGGATGTTTTGAAGTCTTTCGGTCAGGCGTATTTGAAGGAGCTGATTGGCAAACCTTTCCCAGATTTTCAGTTTAAGGGCATGAAAATGGCAAAGTGCAAGATTAAAGGGTTGACAGTGAATCATCTGGATGTGGACCGTGATAAGGTTGTTGTCAGGTTCCAGCAGGATTCAGGTCTTCAGTTTGAGTTCAGGGACCTGAACTTTACTGCAGAACTTCAACGAGAAATCAATGTGCGGGGAAAGATtgtcGACGAAGGGACGGTTAATGTTACAGGAAAAGGTGTGAGGGCCACCATTGGagtgagactgaaccaaaaccAAGGACGTCTGAGTCTCAAGATACAGAACTGTGATGTCCATGCTGACAAGATCGCCATGAAGTTCCACCAAGGACTCGGGCCTGTGCTGAACCGATTCAAAAAAGAGTTCCAGCATTTATTTAAGACCAAGgtctGTCCTGCTATTAAGAGACATGCTGTCCCTAAAGTGAACTCCATGTTGGCGAACGTCACCATGGCAATGAGTTTGAGCGAAGACCTTGGTATGAACCTGGACTACTCTCTGAGCGGAGAGGTCACGGTGACGCCAAGCAGCCTCGACGTGCCGTTCACAGGTGTGGTGTACCACGGTGACATAAGGCCTGCTTTACCAGCAGCAGGCGTACAGCCGGTGTTCACAGAAAGTAACCTGATGGCTTATGTGGGCATCTCTGAGGACCTGTTTAAAAGCGCCGCCCAGGCTCTCTACAGCCACGGGCCTTTACAACTGGACGTTCCACAGATTGGTACTATACCAAATTATGTTCTACACACTTGGGGATTACCTGAGGGTCGTGTTGAAGTTGAGCTAACTGAGGTGCCAGACATCACCATCAGTCAGGATGGACTCTCTGTCTACGTGAAGGCCATCGCCCAATCTTTAGTTAACCCAGATCTTCCGCATCTTCCCATGACGTGTCAGGTTCTTATAAATGTCGATATGGAAGGATGCCGTCTGATTCTTCAGGCTCTAAGCTCCAAGCGACATTTGTTGACACATCATCAAAGATTTCATCATTCATTGAGGGTAAGTACTGATACacagtcagaaacacacacttaaACTCACTTAAAGGGTActatacacgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgt
>XR_005641977.1
CAGACATTGACAGCTTGTTGAGAAGGTCTGCTCGCCACTCTGAGAACATTCTGGGTTAGTTTGTCAGGATGACTTCCTGTGTGTTGTCCCTCTACTTCCTGCTCTCCCTGTGTTCCTCCATCTCTGCCGACGGTCCCACCGGACTCAAAGTGAGAATCACCGACAGAGCACCGGATGTTTTGAAGTCTTTCGGTCAGGCGTATTTGAAGGAGCTGATTGGCAAACCTTTCCCAGATTTTCAGTTTAAGGGCATGAAAATGGCAAAGTGCAAGATTAAAGGGTTGACAGTGAATCATCTGGATGTGGACCGTGATAAGGTTGTTGTCAGGTTCCAGCAGGATTCAGGTCTTCAGTTTGAGTTCAGGGACCTGAACTTTACTGCAGAACTTCAACGAGAAATCAATGTGCGGGGAAAGATtgtcGACGAAGGGACGGTTAATGTTACAGGAAAAGGTGTGAGGGCCACCATTGGagtgagactgaaccaaaaccAAGGACGTCTGAGTCTCAAGATACAGAACTGTGATGTCCATGCTGACAAGATCGCCATGAAGTTCCACCAAGGACTCGGGCCTGTGCTGAACCGATTCAAAAAAGAGTTCCAGCATTTATTTAAGACCAAGgtctGTCCTGCTATTAAGAGACATGCTGTCCCTAAAGTGAACTCCATGTTGGCGAACGTCACCATGGCAATGAGTTTGAGCGAAGACCTTGGTATGAACCTGGACTACTCTCTGAGCGGAGAGGTCACGGTGACGCCAAGCAGCCTCGACGTGCCGTTCACAGGTGTGGTGTACCACGGTGACATAAGGCCTGCTTTACCAGCAGCAGGCGTACAGCCGGTGTTCACAGAAAGTAACCTGATGGCTTATGTGGGCATCTCTGAGGACCTGTTTAAAAGCGCCGCCCAGGCTCTCTACAGCCACGGGCCTTTACAACTGGACGTTCCACAGATTGGTACTATACCAAATTATGTTCTACACACTTGGGGATTACCTGAGGGTCGTGTTGAAGTTGAGCTAACTGAGGTGCCAGACATCACCATCAGTCAGGATGGACTCTCTGTCTACGTGAAGGCCATCGCCCAATCTTTAGTTAACCCAGATCTTCCGCATCTTCCCATGACGTGTCAGGTTCTTATAAATGTCGATATGGAAGGATGCCGTCTGATTCTTCAGGCTCTAAGCTCCAAGCGACATTTGTTGACACATCATCAAAGATTTCATCATTCATTGAGGaatggTTTGACGAAGGAGTCCTGATCCCTCTGCCTGACAGACTGGACTTCACTCAGATGAAGATCAATTATTATCCAggcttCATGGTGGTCGGGGGGGACCTGACCTATACTGTGCAGAGGGCTGTTCTgaggtccatccatccatctccaaCCATAGCTATAGATCCAGGCTCCAGCAGGAAATTCCAATCGTTCCTTTTCCTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826171.1 True 1642 mRNA 0.47 15 37934062 37956436
XM_039826172.1 False 1439 mRNA 0.48 13 37934062 37942999
XM_039826173.1 False 1364 mRNA 0.48 12 37934062 37942999
XR_005641977.1 False 1446 transcript 0.49 14 37934062 37956280

Neighbor

gene id symbol gene type direction distance location
LOC120575386 NA coding upstream 4419 37885496 ~ 37929643 (+)
psmd3 psmd3 coding upstream 73544 37835320 ~ 37860518 (+)
LOC120575334 NA coding upstream 154268 37770241 ~ 37779794 (+)
LOC120575332 socs7,LOC102301327,LOC101475758,LOC102205792 coding upstream 709173 37193977 ~ 37224889 (+)
kpnb1 kpnb1 coding upstream 740711 37177075 ~ 37193351 (+)
LOC120575399 NA coding downstream 22544 37978980 ~ 37984499 (+)
LOC120575400 NA coding downstream 65338 38021774 ~ 38025116 (+)
LOC120575397 NA coding downstream 123657 38080093 ~ 38088521 (+)
samd14 LOC106528058,LOC104957522 coding downstream 203556 38159992 ~ 38202432 (+)
LOC120575395 NA coding downstream 310310 38266746 ~ 38268039 (+)
G161505 NA non-coding upstream 131621 37802229 ~ 37802441 (+)
G161476 NA non-coding upstream 228121 37705619 ~ 37705941 (+)
G161442 NA non-coding upstream 246911 37635907 ~ 37687151 (+)
G161433 NA non-coding upstream 340078 37593626 ~ 37593984 (+)
G161423 NA non-coding upstream 372434 37559927 ~ 37561628 (+)
G161523 NA non-coding downstream 1507 37957943 ~ 37962475 (+)
G161535 NA non-coding downstream 38411 37994847 ~ 38009171 (+)
G161546 NA non-coding downstream 85330 38041766 ~ 38045025 (+)
G161558 NA non-coding downstream 113058 38069494 ~ 38074567 (+)
G161589 NA non-coding downstream 267670 38224106 ~ 38224407 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 814808 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1458590 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 1808510 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 2285078 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 2878406 35045717 ~ 35055656 (+)
G161714 NA other downstream 514278 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 814271 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 826181 38782617 ~ 38784044 (+)

Expression


Co-expression Network