LOC120575386


Basic Information

Item Value
gene id LOC120575386
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 37885496 ~ 37929643 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826155.1
AGGtttgcctcctcttcctcttgtgttgtctttgtgtaCAGACTGGGCTGTGTTTCTGTGGTTCCACACCAGgtgtgtgtctccatggcgacagttgtgtgtgtgctgctgagCGTGTGCGTCAGTCTGAGTGTGGCGTTTAACCTCGACACGGCTTTCCCGCTGCTGAAGACGGGCGGAGACGGAACTCTGTTCGGACTTTCTGTCGCTCTGCACCAagacctgcagacagacagctacCTCCTATTGGTCGGAGCTCCCAGGGAGAAGGCGGAGCCTAACGTCCCAGCCAATCGGACAGGAGGAGTTTTCAGCTGCCCGATcaccactgaccaatcagagtgcAGCAGGATGAAGCTCATAGACCCAGAGCTGAACTTGTCTGAGGACCTGATTGAAGACATGTGGTTGGGCGTCTCAGTAGCCAGTCAGGGCCGACCTGGAGGGAGGGTCCTGgcgTGCGGTCATCGTTTTGTTAAACTCTATGGAGAGTTTAAACTCAGACACATGATTGGCCGCTGTTATCTTCATGGAAACGACCTTCAGTACAACGAGACAGACGGACACTGGCAGACCTTCGACCAGCCCTGCAGtcaCCTGGGTGATGTCAGCGGTGAGGTCATGTGTAACATGGGGATCTCTGCCTCCATCACTCAGACTGAAGTCATCGTCGGCTCACCTGGAAGCTACGAATGGCAAGgaaATGTCCACGTCTCTTGGATGAATCCAGACGATGTCTTTGACACCCGGAGGAGTTCCTTCCCCAACATGAGGCGCAGACACATTTACAcaggcTATTCGGTGACTCAGGCTCTCAGTCTCCTTTCTAAGGACGATGAAACCATAGTAACAGGAGCTCCTAAAGACAGTAAAGAAGACGCTCGCGGCTCCGTGCTGCTGGCCGCCAAGCGCTCCAAAACACTGATGACTCAGCAGACTCTGCGCGGGGAACAGACGGGCTCATACTTCGGCAACGCCGTGGCAACCACCGACATCAACAATGACGGGTGGAACGACCTGCTGGTGGGCGCTCCTTTTTACTTCCATCGCCAGCACGAGGTGGGCGGAGCAGTTTACGTTTACATGAACGCAGGAGGGCGGTTTGATTCTCGGGCCAGCACGGTGCTGAGAGGACCGGCTGGCTCGGCGTTTGGTATGGCTGTCACCGCCGCCGGAGACCTGAACCAAGATGGCTTCCAGGACTTTGCAGTCGGAGCTCCTTTCCATGAAACAGGAAGTGTGATGATCTGGAGCGGGAGCAGAGAGGGCGTCTCTGCAGACCCGAGCCAGgtgaTCTGGGGTAGCAGAGTGTCTCCGGGCTTCAGGACGTTTGGCTACTCTCTGTCTGGAGGTCTGGATGTCGACAGGAACAGATATCCAGACCTGCTGGTCGGCTCTCTGGACGATACCGTAGCTCTGCTCAGAACTCGTCCAGTCGTTCACCTGAATAAAACCATTCGAGTTTCTCCAAACGTCGTCGACCCCAACAGCTGCGACTTCTGtgttcaGGTGGAGGTGTGTTTCTCTTACATGTTCAGCACTGGAGAGAGGAACGACAGAGACAACATCAccgTCCACTTCGCCATTGCTGCTGATGTCACCAGCCTCAACCCCCGCCTCCATTTCCGGGACAATGGGAAGAGTGTGTACTCAAGTTACCTGTCAATGCCGAAAAAACAATGTGAGACCTTAAGAGTCGGACTGCTGAGTCCGATCCGAGACAAAGTGGAACCTCTGGTGTTCTTGCTGAACGTCTCTCTGTACGAGAAGCTTCCCAAGAAAAGAAACGCCGTGCAGGACTTGAAACGCCTCCCGGTGCTGAGCCAGACGCCTCGGCCCATCAGAACCCAGATCCACATCCAGAAGGCCTGTGGTTCTGATAACCGCTGCCATAGCAACCTGCAAATGACGGCCCAGTTCACAGACGAGAACCAGAAACCCTTTGCCATGCAGAAGGACAGTCAAGTGTTACACTACGACTCCAGCATTAACCGATTGTTTCTGGAGGTTAACGTCAGCAACACACCGTCACCGGGACGACCAGCAGAGGACGCTCACAACGCCGTTTTGAACGTTAGCATCCCACCATCGCTCATATACTCCGGAGTCCGAAAAAAGGGCGACGGCCTGGCAGCGGTGGAGTGTTCTATTGAGGACGCAGTTCTTCTGTGTGAGCTGGGGAACCCATTCAAAAGCAACAAGAAGGTTCAGGTGTTGATCATATTTCAGACGTCTGAGATCAGTTTAGACACCAGAGAGATTCAGTCTGGGCTGCAGCTGTCCACGCTCAGCGAGCAGTCAGACCTGCTTCCTGTCTCGGTCTCCATGTTGGTGGAGTATTCACTGCAGACATCTCTCACTCTAATCAGCCCGCCAGGCCCCGCCTCCTTCAGCGGTCATGTGACCGGTGAGTCGTCCATGAAGCAGACTGAGGACATCGGCAGTCTGCTGCTCTTCACCTTCCAgGTGCACAGCAGCGGGAAGCCACTGGGTCACCTAGGCTACCTGCAGCTGGAGTTTGATTGGCCGTGGGAGGCGACCAATGGGAAGTGGCTGCTGTACCTCGCAGAGATCCGAGTGAATGGCACATCGGAGGCTCGCTGCACTCCGCCCGGCAACATCATCAACCCGCTCAACCTCAGGCTGTCAAATGCTGAGACGaacaagaggaagaggaggagtctGAAGGCTGAggcagaggagaagaaggagaagcaGGGAGAAAAAACTTTACCTGTCCTCCACCTGCAGGGACAGAAGAAGAAGTCCTACACTCTGgACTGTGTTCGTGGTGCTAAGTGTGTGACGTTCGTCTGTCCGTTGGTCGACATGAAGAACTCAGCGACTCTGACAGTCAGAGCCAGACTCTGGAACTCCACCCTGATCGAGGACTTCAGCGATGCGAGGAGTGTGTTGGTTCGAGGCCGAGCGACTCTGAAGCTGCAGACGAACAAACCGACCATCACCATGGAGCCTCGCAGCACAGAGATTGAGGTCCTCGTTTACCCAGAGCCGGGGCAGCCGGTGGACTCCAGAGCCCCCCTGTGGATCCTGGTGCTGTCGGTGCTGGCTGGAGTCCTTTTGCTGGCTGCGATCTGCCTGCTGCTCTGGAAGTGTGGTTTCTTCGTGCGTCAGAGGGCGTGTCTGGCCGCGGTGCTCCACCAGGGGAGGATCATGGGTAAAgacgagcagcagcagcacacagacGCTGACGGTTTCCTGATCCAGGATGGCGTTGGCTCGTCCAGAAACAGGAAGTCACCCAAACACTGGGTCACCTCCTGGATTGAGACAGACTGACGGTATCCAAGGAAACACAACCAGAACCGGACCAAACCAGACCGATACACTGCCATTTAATACCtgctggactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagttgtGATTTAAATATTTCTCTTTGTAAACGACAGAAGCTGATTTATGTTCATatgaaacattttgtttattatttatctgtATTTggaatatttaatgttttttatatatctgTATGATCTGCTGTGTGTGAACTGAACTTCCCAGCATCCTCCTGGTCTCTGAGTGAGATCATATATAAAGAAATAAACTAA
>XM_039826156.1
agaaccaaaaactaacgttccccaacgttccccaaacgttctgtgttagtgTGGTACTAACGTGTACGGAGTAAGATGTGTTGGactatattctgttatgttgggTTCTAAAGGAGTTTAAATATCAGACGGATAAAGAAACAGGTGCTGACAGGAAGCTTTGATCAGCTGCTTTTTCTCCGCTTTGCAGAGTCTGATTAGCTATTGTAGCAGCCTCAgataactctgtgtgtgtgtgtatgtgtgtgtgtttgatcaaCTGTAGACTGTTTGCCACCGAAGGGAAggtattttctgctgttttttgaATGAACTTTTGtccagcgtgtgtgtgtatgtgttactgAAAATCAAAAAAAGGAGTAACAGAAAAGAGGAAGTAATCacaaagacaggaagtgtgtgtgggagagcaGTCTAAAAATCAGCCCTTATAATGTCagactttcacacacacacacacacacacacacacacacacacacacacacacacacacacaaattaaaacGGGGGTGTGTGTAGAGATAAAATCAAGGTGCCCTCGcaaacgtgtgtgtttgtgtatgtgtgtgtgggcggagAGAGGGACATGATTTCATTTCAGGGTGCCTGAAGAatgagaatgagagagagagagagggagagagcgagagagctgTCTGAGCGCGCTCAGATCAGATTAGTCGgcagacagagcagcaggcagaCGGAGCTCATCGGGAATTGAACCTGCGGAGCAACATTGTATTAATCTTCATTAAGAAGCAGCAGGTCCAGgtgtgtgtctccatggcgacagttgtgtgtgtgctgctgagCGTGTGCGTCAGTCTGAGTGTGGCGTTTAACCTCGACACGGCTTTCCCGCTGCTGAAGACGGGCGGAGACGGAACTCTGTTCGGACTTTCTGTCGCTCTGCACCAagacctgcagacagacagctacCTCCTATTGGTCGGAGCTCCCAGGGAGAAGGCGGAGCCTAACGTCCCAGCCAATCGGACAGGAGGAGTTTTCAGCTGCCCGATcaccactgaccaatcagagtgcAGCAGGATGAAGCTCATAGACCCAGAGCTGAACTTGTCTGAGGACCTGATTGAAGACATGTGGTTGGGCGTCTCAGTAGCCAGTCAGGGCCGACCTGGAGGGAGGGTCCTGgcgTGCGGTCATCGTTTTGTTAAACTCTATGGAGAGTTTAAACTCAGACACATGATTGGCCGCTGTTATCTTCATGGAAACGACCTTCAGTACAACGAGACAGACGGACACTGGCAGACCTTCGACCAGCCCTGCAGtcaCCTGGGTGATGTCAGCGGTGAGGTCATGTGTAACATGGGGATCTCTGCCTCCATCACTCAGACTGAAGTCATCGTCGGCTCACCTGGAAGCTACGAATGGCAAGgaaATGTCCACGTCTCTTGGATGAATCCAGACGATGTCTTTGACACCCGGAGGAGTTCCTTCCCCAACATGAGGCGCAGACACATTTACAcaggcTATTCGGTGACTCAGGCTCTCAGTCTCCTTTCTAAGGACGATGAAACCATAGTAACAGGAGCTCCTAAAGACAGTAAAGAAGACGCTCGCGGCTCCGTGCTGCTGGCCGCCAAGCGCTCCAAAACACTGATGACTCAGCAGACTCTGCGCGGGGAACAGACGGGCTCATACTTCGGCAACGCCGTGGCAACCACCGACATCAACAATGACGGGTGGAACGACCTGCTGGTGGGCGCTCCTTTTTACTTCCATCGCCAGCACGAGGTGGGCGGAGCAGTTTACGTTTACATGAACGCAGGAGGGCGGTTTGATTCTCGGGCCAGCACGGTGCTGAGAGGACCGGCTGGCTCGGCGTTTGGTATGGCTGTCACCGCCGCCGGAGACCTGAACCAAGATGGCTTCCAGGACTTTGCAGTCGGAGCTCCTTTCCATGAAACAGGAAGTGTGATGATCTGGAGCGGGAGCAGAGAGGGCGTCTCTGCAGACCCGAGCCAGgtgaTCTGGGGTAGCAGAGTGTCTCCGGGCTTCAGGACGTTTGGCTACTCTCTGTCTGGAGGTCTGGATGTCGACAGGAACAGATATCCAGACCTGCTGGTCGGCTCTCTGGACGATACCGTAGCTCTGCTCAGAACTCGTCCAGTCGTTCACCTGAATAAAACCATTCGAGTTTCTCCAAACGTCGTCGACCCCAACAGCTGCGACTTCTGtgttcaGGTGGAGGTGTGTTTCTCTTACATGTTCAGCACTGGAGAGAGGAACGACAGAGACAACATCAccgTCCACTTCGCCATTGCTGCTGATGTCACCAGCCTCAACCCCCGCCTCCATTTCCGGGACAATGGGAAGAGTGTGTACTCAAGTTACCTGTCAATGCCGAAAAAACAATGTGAGACCTTAAGAGTCGGACTGCTGAGTCCGATCCGAGACAAAGTGGAACCTCTGGTGTTCTTGCTGAACGTCTCTCTGTACGAGAAGCTTCCCAAGAAAAGAAACGCCGTGCAGGACTTGAAACGCCTCCCGGTGCTGAGCCAGACGCCTCGGCCCATCAGAACCCAGATCCACATCCAGAAGGCCTGTGGTTCTGATAACCGCTGCCATAGCAACCTGCAAATGACGGCCCAGTTCACAGACGAGAACCAGAAACCCTTTGCCATGCAGAAGGACAGTCAAGTGTTACACTACGACTCCAGCATTAACCGATTGTTTCTGGAGGTTAACGTCAGCAACACACCGTCACCGGGACGACCAGCAGAGGACGCTCACAACGCCGTTTTGAACGTTAGCATCCCACCATCGCTCATATACTCCGGAGTCCGAAAAAAGGGCGACGGCCTGGCAGCGGTGGAGTGTTCTATTGAGGACGCAGTTCTTCTGTGTGAGCTGGGGAACCCATTCAAAAGCAACAAGAAGGTTCAGGTGTTGATCATATTTCAGACGTCTGAGATCAGTTTAGACACCAGAGAGATTCAGTCTGGGCTGCAGCTGTCCACGCTCAGCGAGCAGTCAGACCTGCTTCCTGTCTCGGTCTCCATGTTGGTGGAGTATTCACTGCAGACATCTCTCACTCTAATCAGCCCGCCAGGCCCCGCCTCCTTCAGCGGTCATGTGACCGGTGAGTCGTCCATGAAGCAGACTGAGGACATCGGCAGTCTGCTGCTCTTCACCTTCCAgGTGCACAGCAGCGGGAAGCCACTGGGTCACCTAGGCTACCTGCAGCTGGAGTTTGATTGGCCGTGGGAGGCGACCAATGGGAAGTGGCTGCTGTACCTCGCAGAGATCCGAGTGAATGGCACATCGGAGGCTCGCTGCACTCCGCCCGGCAACATCATCAACCCGCTCAACCTCAGGCTGTCAAATGCTGAGACGaacaagaggaagaggaggagtctGAAGGCTGAggcagaggagaagaaggagaagcaGGGAGAAAAAACTTTACCTGTCCTCCACCTGCAGGGACAGAAGAAGAAGTCCTACACTCTGgACTGTGTTCGTGGTGCTAAGTGTGTGACGTTCGTCTGTCCGTTGGTCGACATGAAGAACTCAGCGACTCTGACAGTCAGAGCCAGACTCTGGAACTCCACCCTGATCGAGGACTTCAGCGATGCGAGGAGTGTGTTGGTTCGAGGCCGAGCGACTCTGAAGCTGCAGACGAACAAACCGACCATCACCATGGAGCCTCGCAGCACAGAGATTGAGGTCCTCGTTTACCCAGAGCCGGGGCAGCCGGTGGACTCCAGAGCCCCCCTGTGGATCCTGGTGCTGTCGGTGCTGGCTGGAGTCCTTTTGCTGGCTGCGATCTGCCTGCTGCTCTGGAAGTGTGGTTTCTTCAGGAGAGCCAGCACCAGAGAGATGTACCAGGCAAAGAGCCAGAGAGCGTCCAGGAGGAGCCAGCCGTCGGAGAGCGAGAGGCTGAATACGGAGCTCTGATGGCGGGCACACTGCTGCCAGAGAGCCCCTCTTGTGGTTTCTTCGTGCGTCAGAGGGCGTGTCTGGCCGCGGTGCTCCACCAGGGGAGGATCATGGGTAAAgacgagcagcagcagcacacagacGCTGACGGTTTCCTGATCCAGGATGGCGTTGGCTCGTCCAGAAACA

Function

GO: NA

KEGG:

id description
K06482 ITGA3, CD49c; integrin alpha 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826155.1 False 3605 mRNA 0.54 28 37886274 37929643
XM_039826156.1 True 4104 mRNA 0.54 29 37885496 37929291

Neighbor

gene id symbol gene type direction distance location
psmd3 psmd3 coding upstream 24978 37835320 ~ 37860518 (+)
LOC120575334 NA coding upstream 105702 37770241 ~ 37779794 (+)
LOC120575332 socs7,LOC102301327,LOC101475758,LOC102205792 coding upstream 660607 37193977 ~ 37224889 (+)
kpnb1 kpnb1 coding upstream 692145 37177075 ~ 37193351 (+)
zgc:158376 LOC103361495,LOC101474986,LOC102781812,LOC102300501 coding upstream 717720 37146845 ~ 37167776 (+)
LOC120575399 NA coding downstream 49337 37978980 ~ 37984499 (+)
LOC120575400 NA coding downstream 92131 38021774 ~ 38025116 (+)
LOC120575397 NA coding downstream 150450 38080093 ~ 38088521 (+)
samd14 LOC106528058,LOC104957522 coding downstream 230349 38159992 ~ 38202432 (+)
LOC120575395 NA coding downstream 337103 38266746 ~ 38268039 (+)
G161505 NA non-coding upstream 83055 37802229 ~ 37802441 (+)
G161476 NA non-coding upstream 179555 37705619 ~ 37705941 (+)
G161442 NA non-coding upstream 198345 37635907 ~ 37687151 (+)
G161433 NA non-coding upstream 291512 37593626 ~ 37593984 (+)
G161423 NA non-coding upstream 323868 37559927 ~ 37561628 (+)
G161520 NA non-coding downstream 6630 37936273 ~ 37936719 (+)
G161523 NA non-coding downstream 28300 37957943 ~ 37962475 (+)
G161535 NA non-coding downstream 65204 37994847 ~ 38009171 (+)
G161546 NA non-coding downstream 112123 38041766 ~ 38045025 (+)
G161558 NA non-coding downstream 139851 38069494 ~ 38074567 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 766242 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1410024 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 1759944 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 2236512 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 2829840 35045717 ~ 35055656 (+)
LOC120575390 NA other downstream 4419 37934062 ~ 37956436 (+)
G161714 NA other downstream 541071 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 841064 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 852974 38782617 ~ 38784044 (+)

Expression


Co-expression Network