G161442


Basic Information

Item Value
gene id G161442
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 37635907 ~ 37687151 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218512
GTTTCTGTGTTTCCTCCTGACCTGTAGGGGGCGCCACGTCTAGTCTTTGCAGGCTGTTTTTCCGAGGAGGGTAGTTTCCGGTTTTGGAGAGGCGGCGGTGGCGGTGGTTCATCATGGCGGCTGGAGAGACGATACCAGGGGGCGGGACTTTACCCTTCCGCAGGTACAGCTCCTCCATCTCTGTCTTCTGATTGGCCTGCAGGTTCTGCACCTCTGCCTGGTGTCTTTCACGTAGCTCGTTCAGCTCCTCCCACAGCTCCTCGTCGTCGTTTTCTGATTCGTCGGAGCTGATGTAATGTGCTGCGCGGCTCCGTGATTGGCTGAAGCTGCCGGCCAACCCCTCCCACAGCCGCTGATCCCTCCTTATCTTcctgtcctcctcttcctcctgtcctccagagttgtcatggtaaccatgaGGTTGACCAGGTGGGGAGACAGTCACTGTGCTGAGGCTGCTCTCTGATTCGCTCTGCTTCTCCGTGCTGCTCTCTgagctctctgattggttcgACAAAGAGGGAGGCGGGGAGTGAGTGGTGGGTATTGCCTGGTTGATGTGGCGGATCTCCTGGTCAAGGACAGCGGGGGTGTCTTTAGATGCCGTCACCTGAAAACGACCAACGGTGAGGATGGCAGGTTTCTTCACCTCGTGTATGGGGGACAGTCTGGGTGACGGTGCGATGGAAGAGGACACCTGGATAACACTGGAAGCAGAGACAGTCTGTGGACCGTGAGGGGGTGGAGCTGAGCCAACCTTCATCTGAACAGAACTGAGGggCAGTCCCTGAGCGACATCGATAGTCCGGCCGGGCGGCCCCCCCTGCTGGCTGTTGGGTGCGGAGCCTGTCTGAGTGATGAGGGGGCTGAAGGATGGCTGGGAGGAGAAAGGACCAGATGAGGAGGCATGGAGCTTAGGGTCCAGGGATGGAGAaatggggggagagagaggggatgggAATGGGGGAGACATGGGCTGGAACTGGGGGGGAAAGCCCTGGTTGGGGGTCCCAGGTTGGGGCATGAAGGAGTGGGCCATACTCATGGCCAGTGAGAGGACGTTGgcaagagagaagagaggctgGTCAGGGGGGGGCCAGTGAGAAGGGGGTGgtgcagaggaagaggaggagggggtgagGAGGGAGGGGTCACTGTAGATTTGGTTGAAGTTGGGGGAGGAGGCGCTGTATGGGGAGTAAGGGGGAGATGGGAGGTTATACAGAGGAGGAGGGGCAGAGTCTGGGTGGGGGTAATGGATGGGGTAGGGGAGGGGCTGACGGTAGGCAGCTGGAGACGGAGGGGGGTAAGATAATTAACATAGAGTTTAAACACATCAGATGGTCATCGTCAGTCTACAGTTATTTCTGTGATTGTAGAAACTTTAATTCTCATGTATGTGTCAATGTGTCTGTTTTATACTGAAGGTAGActtttgcttttgtttcatCTTTTGTGTCTAGTGCAGAGACAGATGTAAGGCATGTTTAACcgagcttagcacaaagactggaaccAGGAAAAAAACCATCGAATGAGAATAAATCCACCATCGAATGTAGAGCTGCCACTactgatttatttcactgtcgattaatgtgtggattattgtctggatgaatggattagttgtctggtctctaaaatgtcagaaaattgtgaaaaatatggatcagtgtttcccaaagcccaagatgacgtccttgtcacagaggaaagaagaaacaaaatattcacatttaccAAGCTGCAATCATTTTTTGGTGAGAATTGTGTTCATTTGTGTAAGTTTAATTATGACAGtagcaaaagtaaaaaaaaaaaaaattatatatggTTTAATGGAAACAACGGAGGCCCCAGGACGCTTCCCTGAGGGAACCCACAATTTGAAGACAGAGAACAAGAGTATTCAAATGTTGGACTTTCCTTAAGTTCTAAATTGGAAAGTggacaaaatgtatttacttCATGAATAGGTGAGGTGTTCATGTACCTGAGGAGGTGGGGAAAGACTGTGACCTCAGCGGTCTGACAGAGGGAGTGGCCTCAGGGCCGATGTAAAAGTGTCCGCCCTTCAAAGATGAGGGTTCAGCATCTGCAATGTCTGATGGGAAAATGCCTCCATAGATAAGTTGGCCTATCTTAGGCGTGTAAAGATTAAATTACATGGATCGGATCACAACACAACAGTCAGGGGCTACAGCAACTAATGCTACATAAAGCTAATTCCTAGATAGATGGACAGATAGATATGTTTCCATCTTTTCTTACCAGGAAGTGAGGACGAGGACGGAGTTTTGGACAGGCTCTGTGCCGGCAGGTTCGGCTGAAGACAAAATTAAATAACATTTAGGAAAAAGACGTCTCAGTCTACATCATTAAGATAAAATTATTAGACGTCTGTCAGAAAGTTTGACCAATGCAGTATTCCATTAATCGTGAGTTAAATGTAATCTAAGAGTGTTTATTCTTTATGTCAATACTGTATTCTCGGGCGGCCTGGAGGCGTTCAGGTGAGATAAGTTGTGGGTGTCGGCTGGCTGCTGATGATGCATCATAGACTCGGCCTTCTTGATGATGTGATACATGCGGAGGATGAACCCTTCTCGCTCTGTCGGCACAATGAAGTCTCTGTGGAT
>TU218514
GCTTCATATTTGTGAATGATACACACTTTATAAACTGAAATAAGTCtctaaatattataataattactGTGAAATGATCAATAAATAAGACACACTGAGATCATAAATCAGACAGAAACTCTACAGCAGATTACTTTAGTTCAATCAGTAAAACAGGTAATAGACGTTTATAACAGATGTCATGTTGTTATAAGCAGATCTAAGTGTTAATTCATGAAGTGGAAGCTGCtgtatttacacatccaggattctgattgggctgaatattgggctttatGACGGGGGTTctggtttctgctgaaccttagAATGTGTTcccaccgaaccgaaccctacgcagTCACTCGGCgtgctacgctggtcgccgtaacgacggcgccgttgattacaggaaagtgtttacgtaggtggagcgttcaatgcagtaggctgtgagaaagtggacatggaactggtgagcagaaaaagttgttgtttggcagtactttcagtccaAAGGAGACCATTCAAgaccagctacatgttcaatctggtcaatgctgattggtctggtggttgcgaggaccctaaactatacacaacatggccgctgttccaacatttggtatgaagcatctgaaagaatacgagttgtgcatgaaggaatctccagacagcagccagaatgcagcaacttcaggtacggcaaaggaaggacagtccctgttgacttcattcatgtgtttactgggttcatggactgaggatgggaggaggagtcagcacaatctcaaccagggAATTAGGTATTCGGcccaaccccaaaaatctggattcagtgcatctcTATAACAAACATATGAAAAAAACTATGTTGACATTTGGTTTCACACTAGACATGAACACTGGTCTCCCTGGGTGACAGTTTTGAGTTATTTTGACCCGTCCACCCCGACCCAAACTGTAAAAGTGCAGAAGACCACCCCTCTGTAATGTTCCCAGTCATTGACTGGTTGATATCAGACTGGTAGATTTGGTTCAGAAGCAGCCTGCTGCATCTACAGTAGCTGCAGACGGCCATTATCATCTGTTCCCATGGTGTCACTTTTTAACGATCTTGCCAATGCATGATGATGCATAATGCTACTCAGCCAACTAGGAGGAAGAGTAGGGCCTCCTCACATATCTGGTCTTGATATCAACACCCATTCAATCAGCTGAGAACATTCAGAGTGAGTGATGAGACTTCATGTAAGAACAAAACTCTTTAAATCAAATTATTCAGACTAAAGGAGTTAAAAAGTGAAAGAAGAATCCTGTAGAATCAGCAGTGATAACACCGTGCTCACAGAGAGCTCAGAGTCAGACGCTAATTACATTTAAAGTTTTAAGACCTTAGGTCTCCTGCACACTGACTGCGTGGCGTTTCTGCTGCGTAGcagctgtgtggatttttctatgtctttacacaccagaaacgtgtgtgacatggcgctgctgctgctagccttgtctgtacacatggatgtttaccataaaaataaacataaatatatactgatctgattacagcattGTAATTGACGGcagaataggctccagaatatttccttctggattgacaggtgcaatattctAAAATCAATAAtcatttattataatttttttaaattacatttagatCTGCaattatgtcaaaacctagagactttcaaacatcaaaatgtcatttgttaaatgtatttgtgtcaaaatgacatataaacatcttttcctattataTTTTGTctggaaatgcttccaacacgcttgcgtgtggCGTAAAAAGAATttgtcggtcctatttctagcatgcacgcgtgtCACACAgacagtgtgcaagctctaacctgttaccatgggagccgaaaaaacggacacgccacgcagatGACACGCTCGCGCCACGCTCGTGGCACGCCACGCTCgtgccacgctcacgccacgcaggcagtgtgaaaGATGCTGGATGTTTTCAGAGAGTTCTCTGATATTCtctgcagagagacaggtttTTTTAAGACTTTGTGATTTTTGTCTCCTTCCCCATCTTTAAATGCTTTCTGAGTGTAAACTTGCAGAACCTCATGAGTTAAACATTAATAATAAGAACCTGTTCTCACATGGGGCTCaattttttctttctaaagTGCTGAAATGTTTTGTAAAATGTTCGAGTcacaattcaaaataaaaaacacatagaagaagaaaataaaatccggaatcaaaataaatattgcaaaaaaaatcGCAGAGTAAAATCAGGTTTTCATAAAGTGCCGTCCTCTTCTTTGTCAGTTTTCATCATCAGACATAATCTTCATTTCCTCAGTTAGTTGGCAGCTTCTCTCTCATGTGCAGCTGTGTTCGGGGGCAAAGGTCACGCCTCTCCCGACTCGGTCCTGAgatccactgctgctgctgctgaccgACCTCTTCCTCATGATACCTGTAGGGGGCGCCACGTCTAGTCTTTGCAGGCTGTTTTTCCGAGGAGGGTAGTTTCCGGTTTTGGAGAGGCGGCGGTGGCGGTGGTTCATCATGGCGGCTGGAGAGACGATACCAGGGGGCGGGACTTTACCCTTCCGCAGGTACAGCTCCTCCATCTCTGTCTTCTGATTGGCCTGCAGcatGGTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218512 False 2642 lncRNA 0.50 5 37643595 37648761
TU218514 True 2661 lncRNA 0.43 4 37635907 37687151

Neighbor

gene id symbol gene type direction distance location
LOC120575332 socs7,LOC102301327,LOC101475758,LOC102205792 coding upstream 411018 37193977 ~ 37224889 (+)
kpnb1 kpnb1 coding upstream 442556 37177075 ~ 37193351 (+)
zgc:158376 LOC103361495,LOC101474986,LOC102781812,LOC102300501 coding upstream 468131 37146845 ~ 37167776 (+)
LOC120573828 NA coding upstream 498096 37120458 ~ 37137811 (+)
LOC120574686 wipf2,wipf2b,LOC102794289,LOC107752530,LOC107549849 coding upstream 578580 37038857 ~ 37057327 (+)
LOC120575334 NA coding downstream 83090 37770241 ~ 37779794 (+)
psmd3 psmd3 coding downstream 148169 37835320 ~ 37860518 (+)
LOC120575386 NA coding downstream 198345 37885496 ~ 37929643 (+)
LOC120575399 NA coding downstream 291829 37978980 ~ 37984499 (+)
LOC120575400 NA coding downstream 334623 38021774 ~ 38025116 (+)
G161433 NA non-coding upstream 41923 37593626 ~ 37593984 (+)
G161423 NA non-coding upstream 74279 37559927 ~ 37561628 (+)
G161392 NA non-coding upstream 90770 37485794 ~ 37545137 (+)
LOC120574838 NA non-coding upstream 119913 37515285 ~ 37515994 (+)
G161389 NA non-coding upstream 249477 37386191 ~ 37386430 (+)
G161476 NA non-coding downstream 18468 37705619 ~ 37705941 (+)
G161505 NA non-coding downstream 115078 37802229 ~ 37802441 (+)
G161520 NA non-coding downstream 249122 37936273 ~ 37936719 (+)
G161523 NA non-coding downstream 270792 37957943 ~ 37962475 (+)
G161535 NA non-coding downstream 307696 37994847 ~ 38009171 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 516653 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1160435 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 1510355 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 1986923 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 2580251 35045717 ~ 35055656 (+)
LOC120575390 NA other downstream 246911 37934062 ~ 37956436 (+)
G161714 NA other downstream 783563 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 1083556 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 1095466 38782617 ~ 38784044 (+)

Expression


Co-expression Network