kpnb1 (kpnb1)


Basic Information

Item Value
gene id kpnb1
gene name kpnb1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 37177075 ~ 37193351 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824737.1
AATATCCTTCCGCGGGAGAGAAGCGCGCGGCCCTTTCCCTCCCGACAACACAGGATGCAAACGGGCGGCGGTGAAGCTACGAGACGTTAACATTTAACGGACCATCCGagtgaaagtgaaaaacaacCGTGCTGTAAACCGGGGAAACTCTCCCGCCTCTTTTATCACCGACCGATCCCGCCCTGTGGCCAACTGACAGAGCTCCGTGGAAGAAATATAATCCGCCGAGAACCCTGAAACTGTGCAGCTTGTGACGGAGagaagcgagagagagagagagagagccgggGGAATGGAGCTCATCACTATCCTCGAGAAGACCGTCTCTCCAGATCGGAATGAACTGGAGGCGGCGCAGAAGTTTCTGGAGCAGGCGGCGATAGAGAACCTGCCTACATTCCTGGTGGAGTTGTCCAAAGTGTTGGCCAACCCGGGGAACACGCAGGTGGCTCGCGTTGCTGCCGGTCTGCAGGTGAAGAACTCTCTGACGTCCAAAGACCCCGACGTGAAGACGCAGTACCAGCAGAGATGGCTGGCCATCGACGGCAACGCTCGCCGCGAGATCAAGAACTACGTTTTACAGACTCTGGGCACGGAGACGTACCGGCCCAGCTCGGCGTCGCAGTGCGTCGCCGGCATCGCCTGCGCAGAGATCCCCGTTAACCAGTGGCCCGAGCTGATCCCACAGCTGGTGGCCAACGTCACGGACCCGTCCAGCACCGAACACATGAAGGAGTCCACGCTGGAGGCCATCGGGTACATCTGCCAGGACATCGACCCGGAGCAACTGCAGGAGAACGCCAACCAGATCCTGACGGCCATCATCCAGGGCATGAGGAAGGAGGAGCCCAGTAACAACGTGAAGCTGGCGGCGACCAACGCTCTGCTCAACTCGCTGGAGTTCACTAAAGCCAACTTCGACAAGGAGACGGAGAGACACTTCATCATGCAGGTGGTGTGTGAAGCGACGCAGTGTCCCGACACCAGAgtgcgtGTGGCAGCCTTACAGAACCTGGTGAAGATCATGTCTCTGTATTATCAGTACATGGAGACATACATGGGACCAGCGCTCTTCGCGATCACCATTGAGGCAATGAAGAGCGATATAGACGAGGTGGCGCTGCAGGGCATCGAGTTCTGGTCCAACGTGTGTGACGAGGAGATGGACCTGGCCATCGAGGCCTCAGAGGTCTGTGCCTCGGAGCAGGGACGCCCCCCCGAGCACACCAGCAAGTTCTACGCTAAAGGTGCTCTGCAGTACCTGGTCCCCATCCTGACGCAGACACTCACCAAACAGGACGAGAACGACGACGATGACGACTGGAACCCGTGCAAGGCGGCGGGCGTGTGTCTGATGCTGCTGGCCACCTGCTGCGAGGATGACGTGGTTCCTCACGTCCTGCCTTTCATCAAAGAACACATCAAACACCCCGACTGGCGCTACAGAGACGCCTCCGTCATGGCCTTCGGATCCATTCTGGAAGGACCCGAACTCAACCAACTAAAACCCCTCGTCATACAGGCGATGCCGACGCTGATCGAGCTGATGAAGGACCCCAGCGTGGTGGTGAGGGACACCACGGCGTGGACGGTGGGGAGGATCTGTGAGCTGCTGCCCGAAGCTGCCATCAATGACGTGTACCTGGCGCCGCTGCTGCAGTGTCTGATCGAAGGCCTGGGGGCCGAGCCCCGAGTCGCCTCCAACGTCTGCTGGGCATTCTCGTCCCTGGCTGAAGCAGCGTATGAAGCCACGGACGCTGCGGAGGACGCAGAGGAGCCCAGCACCTACTGTCTGTCCTCGTCCTTCGAGATCATCGTCCAGAAGCTTCTGGAGACCACAGACAGACCGGACGGTCACCAGAACAACCTTCGCTCTGCAGCCTACGAGGCTCTGATGGAGATCGTCAAGAACAGCGCCAAGGACTGTTACCCCGCCGTGCAGAAAACCACGCTGGTCATCATGGAGAGGCTGCAGCAGGTCCTGCAGATGGAGTCTCACATCCAGAGCACCTCGGACAGAATCCAGTTCAACGACCTGCAGTCGCTGCTGTGTGCCACTCTACAGAATGTCCTGCGTAAAGTGCAGCATCAGGACGCCCTGCAGATCTCAGACGTGGTGATGGCGTCTCTGCTCCGGATGTTTCAGAGCACCGCCGGCTCCGGGGGAGTCCAGGAAGACGCTCTGATGGCCGTGTCTACGCTGGTGGAAGtcctAGGCAGCGACTTCCAGAAATACATGGATGCCTTCAAGCCTTTCCTGGGAATCGGACTGAAGAACTACGCTGAGTATCagGTGTGTCTGGCAGCTGTGGGTCTGGTGTGTGACCTGTGCAGAGCTCTGATGTCCAACATCCTGCCGTTCTGTGACGAGATCatgcagctgctgctggagaacctTGGGAACGAGAACGTGCACCGGTCGGTGAAGCCTCAGATCCTGTCGGCGTTTGGCGACATTGCTCTGGCCATCGGAGGAGAGTTTAAGAAATACCTGGACATCGTCCTGGACACGCTGCAGCAGGCATCTCAGGCACAGGTGGacaagacgGACTACGACATGGTGGACTACCTGAATGAGTTGAGGGAGGGCTGTCTGGAGGCGTACACCGGCATCATCCAGGGCCTGAAGGGGGACCAGGAGAACGTGCACCCTGATGTGATGTTGGTTCAGCCCCGGGTGGAGTTTATTCTCTCCTTCATCCATCACATCGCCGAGGATGAAGATCATTCAGACGGAGTGGTGGCCAACGCTGCCGGACTCATCGGGGACCTGTGCACGGCGTTTGGTAAAGACGTGATGAAGCTGGTGGAGTTGCGTCCTCTCATCAACGACCTGCTGACGGAGGGCCGGCGCTCCAAAACCACCAAGACCAAAACGCTGGCCACCTGGGCCACCAAGGAGCTCCGCAAGCTCAAGAGCCAGGCCTGATTGTTGGCGGCCGGggaaacgagagagagagaactttgagagagagagaaagagagagagacatcagtgAACAATGAGGACAAACTGCCCCACTGGAATCAACTCTTGTGTCTTTGTCGCCAGTGTCCGGTCCAAGCAGAAGTCGAGTGacatgagtgtgtgagagagagacatgtgtgagagagagagagacgtgtgAGAGAGATGATGACATCACACCACCTTCAGTTCCAGCAGGTGACGACTCCCCCTAACTCCCGCCCCCATAAACTCCCCCATCCTGTGGACTGGACTATgactcccccctcctccccccccttctaaataaaaaacaacaaaacaatctcACCTTCAAGCCCTCCTCCCACAATCCACCTCTCTCGCTGTCGCTGGGCTGTCACATGACGTCACCGCACCGCCGCCCTCCCCCGCCCCGGGGggcggagggagggagggagggggggggaggatgggCGATAGATACAAAACACCACGACGAGAAAATAAAAGACTTTTGTGGaatcaaagatttaaaaaagtcaaaaaaatccGAGTGGACTTCTGTGGAAAACtttagatattatttttttttattttatttttttgctcttattttttcttctttatcttCTTCTTCCGAGCACTTAAAACAGCGAAGAAGATCCACCTGCTCCGTTTTCAGTGCTCTTATCAACAACGGCACTAAAttcctacaaaataaaagttaaaaaaaaaaaaaaaaagcaacaggcGAAGAGGAATCTTGCGAGGAGCGAGTGCCAAACTGGGAATAGCTTAGCGGAAAATAAAAGGAGTGGAAGCGAGCTGCTGGTGAAGCGTTTCACTTTTTATTTCCCCGCTGCACACTGGTTTTTGGGAGAAGGGTCACTCAccaatttttcctttttttgcttGTTTAAACAAAATTCAGAGAATTGAAGACGTTTGTATAAGGTTATATTTTTCCATTGCTATgatgaaaataaagtaaaaaaaaaaacaaatgatatgAAACATTCCCCGAGCAGTTCTGGTGATTTcggtcctttttctttttttttgtctgaggACTAACATGTTTTTGGACTTTGCTGAACAGTTTGTTTACTCGCCGCCACAAAGaaccatgatttttttttttttttttttttttttttttaacggacTTTATGGCTTGTTTTTGGGTAGCAGCAGCTCCGCGACCGCTCCTTGCTCACGGGGGGAGTTTTTGTTTTGGGACGTTTTTGTAGTTTTCTGGGCTGCAGAAACCTGTGAGAAACGCTCGGCGCCGCCGGTCCGCCTCGCTCCGGGTCTGACCCGCTTCACTTTCCCTCTCTAACCACAACCAGACACATACACGGAGACTTCCCGTCACGGCTAACAAGTGGAAGCTCTCGTTGGGAAATAGTTGAACTTTCCTTTTTTTGAGCTGAAAGTGAAGCGCTCCCAGCCTCGGAGAAGCTCTTATTTTGAAGAGGCGAGGCAGCGTAGGGAGGACGTACTCTTCCTGTGTTGATGAACCGATTTATTATTGATTGTGAATCATTAAAGCCAATCtgctttttatttcatattcaaCTTTAGTGAACTAATAAAGTCTATATTGTACTGAA
>XM_039824738.1
AATATCCTTCCGCGGGAGAGAAGCGCGCGGCCCTTTCCCTCCCGACAACACAGGATGCAAACGGGCGGCGGTGAAGCTACGAGACGTTAACATTTAACGGACCATCCGagtgaaagtgaaaaacaacCGTGCTGTAAACCGGGGAAACTCTCCCGCCTCTTTTATCACCGACCGATCCCGCCCTGTGGCCAACTGACAGAGCTCCGTGGAAGAAATATAATCCGCCGAGAACCCTGAAACTGTGCAGCTTGTGACGGAGagaagcgagagagagagagagagagccgggGGAATGGAGCTCATCACTATCCTCGAGAAGACCGTCTCTCCAGATCGGAATGAACTGGAGGCGGCGCAGAAGTTTCTGGAGCAGGCGGCGATAGAGAACCTGCCTACATTCCTGGTGGAGTTGTCCAAAGTGTTGGCCAACCCGGGGAACACGCAGGTGGCTCGCGTTGCTGCCGGTCTGCAGGTGAAGAACTCTCTGACGTCCAAAGACCCCGACGTGAAGACGCAGTACCAGCAGAGATGGCTGGCCATCGACGGCAACGCTCGCCGCGAGATCAAGAACTACGTTTTACAGACTCTGGGCACGGAGACGTACCGGCCCAGCTCGGCGTCGCAGTGCGTCGCCGGCATCGCCTGCGCAGAGATCCCCGTTAACCAGTGGCCCGAGCTGATCCCACAGCTGGTGGCCAACGTCACGGACCCGTCCAGCACCGAACACATGAAGGAGTCCACGCTGGAGGCCATCGGGTACATCTGCCAGGACATCGACCCGGAGCAACTGCAGGAGAACGCCAACCAGATCCTGACGGCCATCATCCAGGGCATGAGGAAGGAGGAGCCCAGTAACAACGTGAAGCTGGCGGCGACCAACGCTCTGCTCAACTCGCTGGAGTTCACTAAAGCCAACTTCGACAAGGAGACGGAGAGACACTTCATCATGCAGGTGGTGTGTGAAGCGACGCAGTGTCCCGACACCAGAgtgcgtGTGGCAGCCTTACAGAACCTGGTGAAGATCATGTCTCTGTATTATCAGTACATGGAGACATACATGGGACCAGCGCTCTTCGCGATCACCATTGAGGCAATGAAGAGCGATATAGACGAGGTGGCGCTGCAGGGCATCGAGTTCTGGTCCAACGTGTGTGACGAGGAGATGGACCTGGCCATCGAGGCCTCAGAGGCCTCGGAGCAGGGACGCCCCCCCGAGCACACCAGCAAGTTCTACGCTAAAGGTGCTCTGCAGTACCTGGTCCCCATCCTGACGCAGACACTCACCAAACAGGACGAGAACGACGACGATGACGACTGGAACCCGTGCAAGGCGGCGGGCGTGTGTCTGATGCTGCTGGCCACCTGCTGCGAGGATGACGTGGTTCCTCACGTCCTGCCTTTCATCAAAGAACACATCAAACACCCCGACTGGCGCTACAGAGACGCCTCCGTCATGGCCTTCGGATCCATTCTGGAAGGACCCGAACTCAACCAACTAAAACCCCTCGTCATACAGGCGATGCCGACGCTGATCGAGCTGATGAAGGACCCCAGCGTGGTGGTGAGGGACACCACGGCGTGGACGGTGGGGAGGATCTGTGAGCTGCTGCCCGAAGCTGCCATCAATGACGTGTACCTGGCGCCGCTGCTGCAGTGTCTGATCGAAGGCCTGGGGGCCGAGCCCCGAGTCGCCTCCAACGTCTGCTGGGCATTCTCGTCCCTGGCTGAAGCAGCGTATGAAGCCACGGACGCTGCGGAGGACGCAGAGGAGCCCAGCACCTACTGTCTGTCCTCGTCCTTCGAGATCATCGTCCAGAAGCTTCTGGAGACCACAGACAGACCGGACGGTCACCAGAACAACCTTCGCTCTGCAGCCTACGAGGCTCTGATGGAGATCGTCAAGAACAGCGCCAAGGACTGTTACCCCGCCGTGCAGAAAACCACGCTGGTCATCATGGAGAGGCTGCAGCAGGTCCTGCAGATGGAGTCTCACATCCAGAGCACCTCGGACAGAATCCAGTTCAACGACCTGCAGTCGCTGCTGTGTGCCACTCTACAGAATGTCCTGCGTAAAGTGCAGCATCAGGACGCCCTGCAGATCTCAGACGTGGTGATGGCGTCTCTGCTCCGGATGTTTCAGAGCACCGCCGGCTCCGGGGGAGTCCAGGAAGACGCTCTGATGGCCGTGTCTACGCTGGTGGAAGtcctAGGCAGCGACTTCCAGAAATACATGGATGCCTTCAAGCCTTTCCTGGGAATCGGACTGAAGAACTACGCTGAGTATCagGTGTGTCTGGCAGCTGTGGGTCTGGTGTGTGACCTGTGCAGAGCTCTGATGTCCAACATCCTGCCGTTCTGTGACGAGATCatgcagctgctgctggagaacctTGGGAACGAGAACGTGCACCGGTCGGTGAAGCCTCAGATCCTGTCGGCGTTTGGCGACATTGCTCTGGCCATCGGAGGAGAGTTTAAGAAATACCTGGACATCGTCCTGGACACGCTGCAGCAGGCATCTCAGGCACAGGTGGacaagacgGACTACGACATGGTGGACTACCTGAATGAGTTGAGGGAGGGCTGTCTGGAGGCGTACACCGGCATCATCCAGGGCCTGAAGGGGGACCAGGAGAACGTGCACCCTGATGTGATGTTGGTTCAGCCCCGGGTGGAGTTTATTCTCTCCTTCATCCATCACATCGCCGAGGATGAAGATCATTCAGACGGAGTGGTGGCCAACGCTGCCGGACTCATCGGGGACCTGTGCACGGCGTTTGGTAAAGACGTGATGAAGCTGGTGGAGTTGCGTCCTCTCATCAACGACCTGCTGACGGAGGGCCGGCGCTCCAAAACCACCAAGACCAAAACGCTGGCCACCTGGGCCACCAAGGAGCTCCGCAAGCTCAAGAGCCAGGCCTGATTGTTGGCGGCCGGggaaacgagagagagagaactttgagagagagagaaagagagagagacatcagtgAACAATGAGGACAAACTGCCCCACTGGAATCAACTCTTGTGTCTTTGTCGCCAGTGTCCGGTCCAAGCAGAAGTCGAGTGacatgagtgtgtgagagagagacatgtgtgagagagagagagacgtgtgAGAGAGATGATGACATCACACCACCTTCAGTTCCAGCAGGTGACGACTCCCCCTAACTCCCGCCCCCATAAACTCCCCCATCCTGTGGACTGGACTATgactcccccctcctccccccccttctaaataaaaaacaacaaaacaatctcACCTTCAAGCCCTCCTCCCACAATCCACCTCTCTCGCTGTCGCTGGGCTGTCACATGACGTCACCGCACCGCCGCCCTCCCCCGCCCCGGGGggcggagggagggagggagggggggggaggatgggCGATAGATACAAAACACCACGACGAGAAAATAAAAGACTTTTGTGGaatcaaagatttaaaaaagtcaaaaaaatccGAGTGGACTTCTGTGGAAAACtttagatattatttttttttattttatttttttgctcttattttttcttctttatcttCTTCTTCCGAGCACTTAAAACAGCGAAGAAGATCCACCTGCTCCGTTTTCAGTGCTCTTATCAACAACGGCACTAAAttcctacaaaataaaagttaaaaaaaaaaaaaaaaagcaacaggcGAAGAGGAATCTTGCGAGGAGCGAGTGCCAAACTGGGAATAGCTTAGCGGAAAATAAAAGGAGTGGAAGCGAGCTGCTGGTGAAGCGTTTCACTTTTTATTTCCCCGCTGCACACTGGTTTTTGGGAGAAGGGTCACTCAccaatttttcctttttttgcttGTTTAAACAAAATTCAGAGAATTGAAGACGTTTGTATAAGGTTATATTTTTCCATTGCTATgatgaaaataaagtaaaaaaaaaaacaaatgatatgAAACATTCCCCGAGCAGTTCTGGTGATTTcggtcctttttctttttttttgtctgaggACTAACATGTTTTTGGACTTTGCTGAACAGTTTGTTTACTCGCCGCCACAAAGaaccatgatttttttttttttttttttttttttttttaacggacTTTATGGCTTGTTTTTGGGTAGCAGCAGCTCCGCGACCGCTCCTTGCTCACGGGGGGAGTTTTTGTTTTGGGACGTTTTTGTAGTTTTCTGGGCTGCAGAAACCTGTGAGAAACGCTCGGCGCCGCCGGTCCGCCTCGCTCCGGGTCTGACCCGCTTCACTTTCCCTCTCTAACCACAACCAGACACATACACGGAGACTTCCCGTCACGGCTAACAAGTGGAAGCTCTCGTTGGGAAATAGTTGAACTTTCCTTTTTTTGAGCTGAAAGTGAAGCGCTCCCAGCCTCGGAGAAGCTCTTATTTTGAAGAGGCGAGGCAGCGTAGGGAGGACGTACTCTTCCTGTGTTGATGAACCGATTTATTATTGATTGTGAATCATTAAAGCCAATCtgctttttatttcatattcaaCTTTAGTGAACTAATAAAGTCTATATTGTACTGAA

Function

symbol description
kpnb1 Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cytoplasm and nucleus. Is expressed in digestive system; nervous system; and neural keel. Orthologous to human KPNB1 (karyopherin subunit beta 1).

NR:

description
PREDICTED: importin subunit beta-1

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0006913 nucleocytoplasmic transport biological_process
GO:0008565 obsolete protein transporter activity molecular_function

KEGG:

id description
K14293 KPNB1, IPO1; importin subunit beta-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824737.1 True 4542 mRNA 0.54 22 37177075 37193351
XM_039824738.1 False 4536 mRNA 0.54 22 37177075 37193351

Neighbor

gene id symbol gene type direction distance location
zgc:158376 LOC103361495,LOC101474986,LOC102781812,LOC102300501 coding upstream 9299 37146845 ~ 37167776 (+)
LOC120573828 NA coding upstream 39264 37120458 ~ 37137811 (+)
LOC120574686 wipf2,wipf2b,LOC102794289,LOC107752530,LOC107549849 coding upstream 119748 37038857 ~ 37057327 (+)
LOC120573814 NA coding upstream 227554 36946242 ~ 36949521 (+)
LOC120575385 NA coding upstream 418960 36754369 ~ 36758115 (+)
LOC120575332 socs7,LOC102301327,LOC101475758,LOC102205792 coding downstream 626 37193977 ~ 37224889 (+)
LOC120575334 NA coding downstream 576890 37770241 ~ 37779794 (+)
psmd3 psmd3 coding downstream 641969 37835320 ~ 37860518 (+)
LOC120575386 NA coding downstream 692145 37885496 ~ 37929643 (+)
LOC120575399 NA coding downstream 785629 37978980 ~ 37984499 (+)
G161264 NA non-coding upstream 3440 37173428 ~ 37173635 (+)
LOC120573858 NA non-coding upstream 186393 36986283 ~ 36990682 (+)
LOC120573813 NA non-coding upstream 230843 36945209 ~ 36946232 (+)
G161226 NA non-coding upstream 238671 36936181 ~ 36938404 (+)
G161190 NA non-coding upstream 276758 36888777 ~ 36900317 (+)
G161265 NA non-coding downstream 15572 37208923 ~ 37209907 (+)
G161270 NA non-coding downstream 46010 37239361 ~ 37239731 (+)
G161360 NA non-coding downstream 121106 37314457 ~ 37314895 (+)
G161363 NA non-coding downstream 125150 37318501 ~ 37318706 (+)
G161365 NA non-coding downstream 127268 37320619 ~ 37320890 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 57821 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 701603 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 1051523 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 1528091 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 2121419 35045717 ~ 35055656 (+)
LOC120575390 NA other downstream 740711 37934062 ~ 37956436 (+)
G161714 NA other downstream 1277363 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 1577356 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 1589266 38782617 ~ 38784044 (+)

Expression


Co-expression Network