G161265


Basic Information

Item Value
gene id G161265
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 37208923 ~ 37209907 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218292
cacacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacaaacaccccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacacacaaacaccccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGgccgc
>TU218302
CTACACAAACACTCCACCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGgccg
>TU218303
CTACACAAACACTCCACCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacaaacaccccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGgccgc
>TU218305
CTACACAAACACTCCACCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacacacaaacaccccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacaaacaccccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGGccgtctacacacacacacacacaaacactccacCAGCCTCAGGGAGCTGGAGAAGGTGGgccgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218292 False 379 lncRNA 0.59 2 37209467 37209907
TU218302 False 295 lncRNA 0.59 2 37208923 37209402
TU218303 False 422 lncRNA 0.59 3 37208923 37209907
TU218305 True 484 lncRNA 0.59 3 37208923 37209907

Neighbor

gene id symbol gene type direction distance location
kpnb1 kpnb1 coding upstream 15572 37177075 ~ 37193351 (+)
zgc:158376 LOC103361495,LOC101474986,LOC102781812,LOC102300501 coding upstream 41147 37146845 ~ 37167776 (+)
LOC120573828 NA coding upstream 71112 37120458 ~ 37137811 (+)
LOC120574686 wipf2,wipf2b,LOC102794289,LOC107752530,LOC107549849 coding upstream 151596 37038857 ~ 37057327 (+)
LOC120573814 NA coding upstream 259402 36946242 ~ 36949521 (+)
LOC120575334 NA coding downstream 560334 37770241 ~ 37779794 (+)
psmd3 psmd3 coding downstream 625413 37835320 ~ 37860518 (+)
LOC120575386 NA coding downstream 675589 37885496 ~ 37929643 (+)
LOC120575399 NA coding downstream 769073 37978980 ~ 37984499 (+)
LOC120575400 NA coding downstream 811867 38021774 ~ 38025116 (+)
G161264 NA non-coding upstream 35288 37173428 ~ 37173635 (+)
LOC120573858 NA non-coding upstream 218241 36986283 ~ 36990682 (+)
LOC120573813 NA non-coding upstream 262691 36945209 ~ 36946232 (+)
G161226 NA non-coding upstream 270519 36936181 ~ 36938404 (+)
G161190 NA non-coding upstream 308606 36888777 ~ 36900317 (+)
G161270 NA non-coding downstream 29454 37239361 ~ 37239731 (+)
G161360 NA non-coding downstream 104550 37314457 ~ 37314895 (+)
G161363 NA non-coding downstream 108594 37318501 ~ 37318706 (+)
G161365 NA non-coding downstream 110712 37320619 ~ 37320890 (+)
G161367 LOC106674584,LOC106674915,LOC106676464,LOC106676424,LOC106675739,LOC106675207 non-coding downstream 113436 37323343 ~ 37324169 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 89669 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 733451 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 1083371 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 1559939 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 2153267 35045717 ~ 35055656 (+)
LOC120575390 NA other downstream 724155 37934062 ~ 37956436 (+)
G161714 NA other downstream 1260807 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 1560800 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 1572710 38782617 ~ 38784044 (+)

Expression


Co-expression Network