LOC120574801


Basic Information

Item Value
gene id LOC120574801
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 36469606 ~ 36475472 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218032
TCCAGCAGCGTGAACTGGAGCTGAGAGCACGTCTGGACCAATGTCTCTGAGCTGAGCATTACACAGAGAACAACAACCTCCATCTTTGATCTGATCCTGAAAACAAGAAGATGGGTGATTTGCAGAGCCGTCTgctggaggaagggagggaggcgcATAGGAAAGATTTGGAAGATTTTGTGTTTCTAATCAAAAACGACGGAAAGGCTCCAGATCTGAGAGTCAACAAGAGCATTGTGATGTTCACAGGTCTGTCGTCTTCAGACAATCTGAGACAACACTACGAGAAGAGGAAAATGGAGGTGGGCGGCTCCGTTAATGACTTAATCAAACTGCATGCTGCAGACTGGATCAAAAACCTGGCGGATAAACTGGC
>XM_039825254.1
CCATCACTCtgcactctcactctctgtcaTCAGAATATCTCCAGCAGCGTGAACTGGAGCTGAGAGCACGTCTGGACCAATGTCTCTGAGCTGAGCATTACACAGAGAACAACAACCTCCATCTTTGATCTGATCCTGAAAACAAGAAGATGGGTGATTTGCAGAGCCGTCTgctggaggaagggagggaggcgcATAGGAAAGATTTGGAAGATTTTGTGTTTCTAATCAAAAACGACGGAAAGGCTCCAGATCTGAGAGTCAACAAGAGCATTGTGATGTTCACAGGTCTGTCGTCTTCAGACAATCTGAGACAACACTACGAGAAGAGGAAAATGGAGGTGGGCGGCTCCGTTAATGACTTAATCAAACTGCATGCTGCAGACTGGATCAAAAACCTGGCGGATAAACTGGCCAGCATGGAGTCAGCTCCTGCACTGGCGGGCCTCGGAGCGCTGGCCATCGCTGTCCTCATCGACTTGGCTTCCTCGAGTCCACCTGAGGAAAGCACAAAGGACGCTCTGCGGGGCGTGTTTGCCGAGGAGAAGGCCTCCGAGGTCTGGGATCAGATCGACGAGTGCCTGAAGAGATGCGTGATGCACATCAACAACGACCCCGAACTGGTGACTGACATCAGACGGATCGAGGTCCAGCTGAGCACCGCCCTCACCAAGCTGAAGAACTCCATGGTGAGGCACGGCCACATGTCGTCTCAGGCTCTGAAGGCCTGGGTGAACGGGGCAGCCTTCCACATCCAGATGCTGATTCACCTGGTGAGACTCGGAGGGACTCAAACCTGCGACCCTGTGGAGAGACTCCTCTCGACTTACCTGAGAGACCTGGACACGCTGTTCATCAAGCACAGGGAAATGATCGAGGGGAAGTGCAGAGTGAATGAGGTTACAAGTACTGATGTGCCATTGAGTTACACATATCTGGTGGATGATGATTTAAAGGCACACTATATGATTTATAATTATGCCTGCTTTAAAGAATACTTTGAGGCTTATTATGATAACAGATACAGCGTGCAGACAAGTGACATCAAGCGTTACTTCAGCGGCATAAGAAACAACCTACAGACGCTGGTTAATCAAAAAGGATACTTTAACATCTAAAcatccagaaaataataataataatattctgACATTATAACTGTTGAGT
>XM_039825255.1
CCATCACTCtgcactctcactctctgtcaTCAGAATATCTCCAGCAGCGTGAACTGGAGCTGAGAGCACGTCTGGACCAATGTCTCTGAGCTGAGTTTTGTGTGTTGCAGCATTACACAGAGAACAACAACCTCCATCTTTGATCTGATCCTGAAAACAAGAAGATGGGTGATTTGCAGAGCCGTCTgctggaggaagggagggaggcgcATAGGAAAGATTTGGAAGATTTTGTGTTTCTAATCAAAAACGACGGAAAGGCTCCAGATCTGAGAGTCAACAAGAGCATTGTGATGTTCACAGGTCTGTCGTCTTCAGACAATCTGAGACAACACTACGAGAAGAGGAAAATGGAGGTGGGCGGCTCCGTTAATGACTTAATCAAACTGCATGCTGCAGACTGGATCAAAAACCTGGCGGATAAACTGGCCAGCATGGAGTCAGCTCCTGCACTGGCGGGCCTCGGAGCGCTGGCCATCGCTGTCCTCATCGACTTGGCTTCCTCGAGTCCACCTGAGGAAAGCACAAAGGACGCTCTGCGGGGCGTGTTTGCCGAGGAGAAGGCCTCCGAGGTCTGGGATCAGATCGACGAGTGCCTGAAGAGATGCGTGATGCACATCAACAACGACCCCGAACTGGTGACTGACATCAGACGGATCGAGGTCCAGCTGAGCACCGCCCTCACCAAGCTGAAGAACTCCATGGTGAGGCACGGCCACATGTCGTCTCAGGCTCTGAAGGCCTGGGTGAACGGGGCAGCCTTCCACATCCAGATGCTGATTCACCTGGTGAGACTCGGAGGGACTCAAACCTGCGACCCTGTGGAGAGACTCCTCTCGACTTACCTGAGAGACCTGGACACGCTGTTCATCAAGCACAGGGAAATGATCGAGGGGAAGTGCAGAGTGAATGAGGTTACAAGTACTGATGTGCCATTGAGTTACACATATCTGGTGGATGATGATTTAAAGGCACACTATATGATTTATAATTATGCCTGCTTTAAAGAATACTTTGAGGCTTATTATGATAACAGATACAGCGTGCAGACAAGTGACATCAAGCGTTACTTCAGCGGCATAAGAAACAACCTACAGACGCTGGTTAATCAAAAAGGATACTTTAACATCTAAAcatccagaaaataataataataatattctgACATTATAACTGTTGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218032 False 376 TUCP 0.48 2 36469645 36474720
XM_039825254.1 False 1167 mRNA 0.49 2 36469606 36475472
XM_039825255.1 True 1182 mRNA 0.49 2 36469606 36475472

Neighbor

gene id symbol gene type direction distance location
LOC120574787 NA coding upstream 15277 36436361 ~ 36454329 (+)
LOC120574797 NA coding upstream 68414 36388622 ~ 36401192 (+)
LOC120574805 pnmt coding upstream 104912 36357080 ~ 36364694 (+)
LOC120574800 NA coding upstream 129411 36332412 ~ 36340195 (+)
LOC120575326 NA coding upstream 193017 36273243 ~ 36276589 (+)
LOC120575385 NA coding downstream 278897 36754369 ~ 36758115 (+)
LOC120573814 NA coding downstream 470770 36946242 ~ 36949521 (+)
LOC120574686 wipf2,wipf2b,LOC102794289,LOC107752530,LOC107549849 coding downstream 563385 37038857 ~ 37057327 (+)
LOC120573828 NA coding downstream 644986 37120458 ~ 37137811 (+)
zgc:158376 LOC103361495,LOC101474986,LOC102781812,LOC102300501 coding downstream 671373 37146845 ~ 37167776 (+)
G160906 NA non-coding upstream 154302 36252921 ~ 36315304 (+)
LOC120574820 NA non-coding upstream 196762 36272395 ~ 36272844 (+)
LOC120574817 LOC107690107 non-coding upstream 197233 36271803 ~ 36272373 (+)
G160895 NA non-coding upstream 202679 36206348 ~ 36266927 (+)
G160884 NA non-coding upstream 306640 36162761 ~ 36162966 (+)
LOC120574819 NA non-coding downstream 67868 36543340 ~ 36543937 (+)
G161116 NA non-coding downstream 148233 36623705 ~ 36624170 (+)
G161124 NA non-coding downstream 163691 36639163 ~ 36645741 (+)
G161172 NA non-coding downstream 331067 36806539 ~ 36806871 (+)
G161173 NA non-coding downstream 337794 36813266 ~ 36822553 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 344054 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 820622 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 1413950 35045717 ~ 35055656 (+)
G160423 mvp other upstream 1502657 34962100 ~ 34966949 (+)
LOC120574901 NA other upstream 1541131 34849589 ~ 34928475 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 627901 37103373 ~ 37119254 (+)
LOC120575390 NA other downstream 1458590 37934062 ~ 37956436 (+)
G161714 NA other downstream 1995242 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 2295235 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 2307145 38782617 ~ 38784044 (+)

Expression


Co-expression Network