LOC120574686 (wipf2,wipf2b,LOC102794289,LOC107752530,LOC107549849)


Basic Information

Item Value
gene id LOC120574686
gene name wipf2,wipf2b,LOC102794289,LOC107752530,LOC107549849
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 37038857 ~ 37057327 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825037.1
TTTAGGTTTGTCACTCCCTGTTTGTCCTGTGTGAGTCCTGGTTATTTGTAGTTGAGAGTTTGTTAGTTGTTTGAGTTAAAATAAAGAGAGTTTATTCTGCATATTTGCTGGAAGAgtcttgcatttgggtccacctgCTGCAATCCTGACAGCTCCACGCAaactgAGCCTTCATGTCATACTTCCTATAAGCAGCGCGCTGCGGCTGCAGTGGACTCGCGCGCTCCTGTGTGTTGACATTCTCTGCAGCAGAGCTGACAGACTAACCGCTAACAACAGTCCCCTGAGAGAGGGACAAACAGCGGGAAGTCGGACCCCGACGGAGACATGAAGACACCGACCAGACAGATGAAGTATGAGTGAACCGGCGGGGAGACCGTAAAGTTCACAGGTGATCAGGTgttgtaacagcagcagcatgcctccccctcctcctccaccagggggaccccctcctccccccaccttcagccagGCCAACACCAGCCCCCCCAAGCTGAGCAGAGACGAGGCCAAAGGTCGTGGCGCTCTGCTGACTGACATCTGCAAAGGCACGCGGCTGAAGAAGGTGGCGGTGGTGAACGACCGCAGCGCGCCGCTGCTCGACAGTAAGAGCCAAACACCAAAGAGCCAAACACCTCCCACAGATCACCCATACATTCGCTTATACCAATACCTACACCAGCAACAGGTGCCGCCGTCTGAGGATCAGCAGAGGACTGCTGCAGATAAGACAGAGAAGCCTAAAGGAGGCGGAGCTGCAGCCGGGGGAGCCAATGGCAGCGCAGCAGGAAGTCCTTCAGGTTCTGTTCCACCGACGCTGTTCACCGCCGGAGTCCCCAAACTCAGACCAGTCGCAGACGGTTCCTCTGGACGTTCTCCCTCCACTCGAGCCGCAGCGCCCCGCCCCCCTAGCCATCGCCATGACGACACAGAGAGCCCCTCCCCTCAGGCGCTGTCGCCAGTGGAAACGGGCCGCTCTCAGCGCCCCTCTCTTCCCAAcctctccccctcctcaccCTCCGGCAGCATGAAGCACTCCTCCtccgccccccctccccctcctcctctttgtcGCCGTGGGAACGCCCCCTCGCCTCCCTCTTCTGCTTACAACCGAGAGAAACCCCTCCCCCCGACCCCCAACAACACCCCGCCCCTCCCCTCCAAACCGCCACCGTCGCCTGCCAACAGCAGACGCCCCCCCACCTCTGGAGGAAACACAGCCCCCCCCTCTTCCGCCTCCTCCCTGGCCCCGCCGCCCCCACCGTACCGCCTCGCCAATGGGTCGACCGGCAGCGGCGAGCCGGCGCCCGAGCTGCCGCAGCGCCACAACTCGCTCAGTAACAAGAGGGCTGCCCCCCCACCGggaggccacacccccaccagaGGCCCCGCCCCTCCACCCCCACCCGCCTCCCCCACACCCTCCCAACAGGGCGCCAACAGGCCACCGCCCCCCATCAGGGACACGCCAAGCAGAGCAGCAGCTCCTCCGGTTCCGGTGCAGCCGTCGGCGGCCGCGTTGAGATCTGCCGGCAGAGAAGCCCCCCCTCCTCCGTACAGGACACATGGTAGCCCCTCCCTCTTTTCTGACCCCCCCACCAGAGGGAAGCCTCCTCCCCCACCCACCCGCACCCCTGCTGCTcctcccccgcccccccctcctctccgcAACGGACActcctccaccacctcctccatccCTCGCTCATTCGCCGATGATTTTGAGTCCAAGTATTCGTTCCATCCTCTGGACGACTTCCCTCCTCCAGAAGAGTACCGACACTTTGCCAAGATCTACCCCAGCAAGGCCaacagagTGATGAGAGGAGCTCCTCCACTGCCTCCTGTTGGGAGGTGAagggctgacacacacacacacacacacacacacgcatatagacacacgcatacacacccacagacacccCCCCCTCCGTTCTGTTTAATGACATCATTCTGCAGCCTCCCTTGCCGCCTCGTTTACGCTCCCAGCTGATTGTCGGAGGAGAGGAACGTGATAAAAACTTTGATCTacagcttcttctttttctctggaCAGCATGAACAACTTTAGATGTTTGTAGTTCTTTTTTTGCACTTGCACTTTTTGTTTGCGAGACCAACGAGCAAGgcgaaggaaggaagaaagaacaAATGCTGCTGGACTTCAGTGATTCAGTTCTcctggatggagggatggacgGATGGAGGGATGACAAACTGAAAATGAAGGAGTGTGttcctctctttctgtgtcaCAGCTGCAGATGAAACCCCCAAACTGTAAAAGTTGCAGGTTCAGAGGAGGCATCATTTTACAAGTCTTAATATTATGAGAGTTAAGTTTTACTTTGTTACTAATTTACAGAAAAACGAGTCGGGACAAAACTATAACACTAAACTGCAACTCTGTTATGGAAATATTAAGACTTCCTGATGAACATAACGGAGGTCAGCTATTGGTGGGTGGACTGCTGTTCTGAAGCCTTGAGTTTTGGTGTTTTGGCCATGGCCATCTTGGTTTTTGGGAGCCAGAAGTGACCGTATTTGGACAAAAATgcggagctggggaggatgacacAGCCAAGCCAGTTATGGTTGTCATGgcgctgtgctaagctaaacgctaacaAGGGAAAGTTGTTGATTTTCAACCATTCTGAAGCGAGGCGTCCAGCGGAGATTTAAgacaaaatgtccaaaaggTAACTATGCTGAAATGAGAAGGTCAAAGGTTAAGATGTAAACATGGACAACAGCCACAAACAACTTGAGTCTATTCTACCTGAACTGAAATCACTTCCTGTGACGTGGGTGTCGCTTGTAAATACTTCCCCTGCATCATCAGCGCTTTATTTTGGCAGGACGTGGCCTCAGAGTCTTTAAGTGCCAAGATGGACGAAACAAAGTCACCtgactcctgctgctgctgctgcaggcactCAGCGGGTTGTACCATGTTGGGttggggggggcgggggtggTGGCAAAtcagtagggctgtgctcgactaaagaaattcttagtcg

Function

symbol description
wipf2b Predicted to enable actin binding activity. Predicted to be involved in actin filament-based movement. Predicted to be active in actin filament. Orthologous to human WIPF2 (WAS/WASL interacting protein family member 2).
wipf2 Predicted to enable actin binding activity. Predicted to be involved in actin filament-based movement. Located in nucleoplasm and plasma membrane.

NR:

description
PREDICTED: WAS/WASL-interacting protein family member 2-like

GO: NA

KEGG:

id description
K19475 WIPF; WAS/WASL-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825037.1 True 3035 mRNA 0.56 10 37038857 37057327

Neighbor

gene id symbol gene type direction distance location
LOC120573814 NA coding upstream 89336 36946242 ~ 36949521 (+)
LOC120575385 NA coding upstream 280742 36754369 ~ 36758115 (+)
LOC120574787 NA coding upstream 584528 36436361 ~ 36454329 (+)
LOC120574797 NA coding upstream 637665 36388622 ~ 36401192 (+)
LOC120574805 pnmt coding upstream 674163 36357080 ~ 36364694 (+)
LOC120573828 NA coding downstream 63131 37120458 ~ 37137811 (+)
zgc:158376 LOC103361495,LOC101474986,LOC102781812,LOC102300501 coding downstream 89518 37146845 ~ 37167776 (+)
kpnb1 kpnb1 coding downstream 119748 37177075 ~ 37193351 (+)
LOC120575332 socs7,LOC102301327,LOC101475758,LOC102205792 coding downstream 136650 37193977 ~ 37224889 (+)
LOC120575334 NA coding downstream 712914 37770241 ~ 37779794 (+)
LOC120573858 NA non-coding upstream 48175 36986283 ~ 36990682 (+)
LOC120573813 NA non-coding upstream 92625 36945209 ~ 36946232 (+)
G161226 NA non-coding upstream 100453 36936181 ~ 36938404 (+)
G161190 NA non-coding upstream 138540 36888777 ~ 36900317 (+)
LOC120573899 NA non-coding upstream 170464 36867654 ~ 36868393 (+)
G161264 NA non-coding downstream 116101 37173428 ~ 37173635 (+)
G161265 NA non-coding downstream 151596 37208923 ~ 37209907 (+)
G161270 NA non-coding downstream 182034 37239361 ~ 37239731 (+)
G161360 NA non-coding downstream 257130 37314457 ~ 37314895 (+)
G161363 NA non-coding downstream 261174 37318501 ~ 37318706 (+)
LOC120574801 NA other upstream 563385 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 913305 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 1389873 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 1983201 35045717 ~ 35055656 (+)
G160423 mvp other upstream 2071908 34962100 ~ 34966949 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 46046 37103373 ~ 37119254 (+)
LOC120575390 NA other downstream 876735 37934062 ~ 37956436 (+)
G161714 NA other downstream 1413387 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 1713380 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 1725290 38782617 ~ 38784044 (+)

Expression


Co-expression Network