G161792 (cdc27)


Basic Information

Item Value
gene id G161792
gene name cdc27
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 38770707 ~ 38772216 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218981
TTCAAAACaatagtcaaaacaaaataaatataaacactaatgaaaaatgctaaactataataaccttggttaGGGTAACTCATAGTAGCTGTTCCTGGGGGCTTAATCTCAGCCCCAAAAGGTGTTGAAATTCAATCCAAAAATTAAATTTCACGTAACTGGTTTTCAcattatgtctctctctctgacctgtctgtctgaactgtctctgacctgtctgtctgcaggcgGCTCTTCAGGAGTTGGAGGAGTTGAAACAGATTGTTCCCAAAGAGTCTCTGGTTTACTTCCTCATAGGAAAGgtgtATAAGAAGCTGGGGCAGACCCACCTGGCTCTGATGAACTTCAGCTGGGCGATGGATCTGGATCCTAAAGGAGCCAACAACCAGATCAAAGAAGCCATCGACAAGAGATACCTGCCGGAGGACGAAGCTGCGGAGGTAGATGACAGTCAGGACAGCAGCGTGATGACAGACGCTGATGACACTCAGCTTCACACAGCGGAGAGTGATGACATCCTTTAGCCCCGCCCCCCTGTCCTGATTGGCTGGAGGAGTACTGTTGCTAGGCAACATTCTAACAGACAGATCTCCAGTTTCGCCCCAGCCTTCATCCctgtcctctgattggctgaaacaGACTGCTGCTGCCCTGAAGCCCCGCC

Function

symbol description
cdc27 Predicted to be involved in cell division; cellular protein metabolic process; and regulation of mitotic sister chromatid separation. Predicted to be part of anaphase-promoting complex. Predicted to be active in cytoplasm. Orthologous to human CDC27 (cell division cycle 27).

NR:

description
PREDICTED: cell division cycle protein 27 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218981 True 664 TUCP 0.48 3 38770707 38772216

Neighbor

gene id symbol gene type direction distance location
LOC120573911 LOC104931894,LOC105903357 coding upstream 36027 38731566 ~ 38734680 (+)
LOC120575342 NA coding upstream 44253 38723832 ~ 38726454 (+)
LOC120575340 NA coding upstream 218224 38540484 ~ 38552483 (+)
LOC120575391 NA coding upstream 390383 38373253 ~ 38380324 (+)
LOC120575393 LOC103366924,LOC100704949,LOC102204201,LOC102307967 coding upstream 397911 38345109 ~ 38372796 (+)
G161842 NA non-coding upstream 2716 38767753 ~ 38767991 (+)
G161841 NA non-coding upstream 4334 38766102 ~ 38766373 (+)
G161839 NA non-coding upstream 18909 38750796 ~ 38751798 (+)
G161837 NA non-coding upstream 29171 38741307 ~ 38741536 (+)
LOC120575413 NA non-coding upstream 230327 38534395 ~ 38540380 (+)
G161714 NA other upstream 299382 38470714 ~ 38471325 (+)
LOC120575390 NA other upstream 814271 37934062 ~ 37956436 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 1651453 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 2295235 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 2645155 36089620 ~ 36125552 (+)
LOC120573912 cdc27 other downstream 10401 38782617 ~ 38784044 (+)

Expression


Co-expression Network