RNA id: TU218981


Basic Information

Item Value
RNA id TU218981
length 664
RNA type TUCP
GC content 0.48
exon number 3
gene id G161792
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 38770707 ~ 38772216 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTCAAAACaatagtcaaaacaaaataaatataaacactaatgaaaaatgctaaactataataaccttggttaGGGTAACTCATAGTAGCTGTTCCTGGGGGCTTAATCTCAGCCCCAAAAGGTGTTGAAATTCAATCCAAAAATTAAATTTCACGTAACTGGTTTTCAcattatgtctctctctctgacctgtctgtctgaactgtctctgacctgtctgtctgcaggcgGCTCTTCAGGAGTTGGAGGAGTTGAAACAGATTGTTCCCAAAGAGTCTCTGGTTTACTTCCTCATAGGAAAGgtgtATAAGAAGCTGGGGCAGACCCACCTGGCTCTGATGAACTTCAGCTGGGCGATGGATCTGGATCCTAAAGGAGCCAACAACCAGATCAAAGAAGCCATCGACAAGAGATACCTGCCGGAGGACGAAGCTGCGGAGGTAGATGACAGTCAGGACAGCAGCGTGATGACAGACGCTGATGACACTCAGCTTCACACAGCGGAGAGTGATGACATCCTTTAGCCCCGCCCCCCTGTCCTGATTGGCTGGAGGAGTACTGTTGCTAGGCAACATTCTAACAGACAGATCTCCAGTTTCGCCCCAGCCTTCATCCctgtcctctgattggctgaaacaGACTGCTGCTGCCCTGAAGCCCCGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU219038 lncRNA upstream 2716 38767753 ~ 38767991 (+) True G161842
TU219037 lncRNA upstream 4334 38766102 ~ 38766373 (+) True G161841
TU219035 lncRNA upstream 18909 38750796 ~ 38751798 (+) True G161839
TU219033 lncRNA upstream 29171 38741307 ~ 38741536 (+) True G161837
TU218970 lncRNA upstream 230327 38534395 ~ 38540380 (+) True LOC120575413
XR_005641792.1 lncRNA downstream 10401 38782617 ~ 38784003 (+) True LOC120573912
XM_039823826.1 mRNA upstream 36027 38731566 ~ 38734680 (+) True LOC120573911
XM_039826059.1 mRNA upstream 44253 38723832 ~ 38726454 (+) True LOC120575342
XM_039826057.1 mRNA upstream 218224 38540484 ~ 38552483 (+) True LOC120575340
XM_039826178.1 mRNA upstream 390383 38373253 ~ 38380324 (+) False LOC120575391
XM_039826174.1 mRNA upstream 390383 38373583 ~ 38380324 (+) True LOC120575391
TU218883 other upstream 299382 38470714 ~ 38471325 (+) True G161714
XR_005641977.1 other upstream 814427 37934062 ~ 37956280 (+) False LOC120575390
TU218278 other upstream 1651456 37115823 ~ 37119251 (+) False utp18
TU218032 other upstream 2295987 36469645 ~ 36474720 (+) False LOC120574801
TU217802 other upstream 2645155 36089620 ~ 36125552 (+) True G160851
TU218982 other downstream 10847 38783063 ~ 38784044 (+) False LOC120573912

Expression Profile