G161523


Basic Information

Item Value
gene id G161523
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 37957943 ~ 37962475 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218643
tttgcagatatgcaaaaatatttattgtacaactgtaatATAAGATGTagaaagtcttttggagattagactccaaggggtagaaaACAGGAACATcaccccccgatggagtccagacactggtggcggcggagaaagagaccagagaccggacccaagaggcaacggagcggtcagccgggagaaacacgAGACCAGAGGCGGCAGGGGGGGAGGAGGgtcgagcgctttgcctgaaacaacagctgacagcacagggagagaacagatttagagcagagttgtaaggctgtgattggcccttgaattttgtggccaagtctgattggtttaactgaaagcgTCACTtctaaacagctgatttgatttaagaatgagtagtgattgggttaatgacgtcttccttaaagaatttgcgctgagcttcattatgactttttatgactttattcaacatactatgactttttatgattttttcaacatactattcaaTGACtttctatgactttattcgacatactatactatgactttttatgactttattcaacataatattttatgactttatgactttattcgtgTAGGATacacgtagggtacagatttgatcattggcaaattatcaaatatgttttatcaatattaatgaagttatgaatatggttattaataactatcaaatcaacaaacaatcaaaacggggcaccaccctgcaagtcagggaccaataatcaaactgtggaacagactcatttctgtggtaatcctttaaaaggaaacaaaggaaggggtgaatttGAGCACGGACCTGTTCAGCCAGCAATTAtcacaataagtacacaaataatcaccagcaactgctaattaagtataatcaaatttattaacgtcacaattatcagtagccaatcaataatccttcaataataaaacgtatataccttttacaatatcacaaccaaacaaagcaaaaacaaagcagcatatgtcatggacacgtctgtgtctgtgtgtgtgtgtgggcgtgtgtgagagagagtgtgtgtgtgtgtgtgtgtgtaagggtgagtgaaagtaaagggggcggtgtcgaaatgtagttctaatacaaaaaaactcccaaaatggctactcctgtgagctgcacaaaactatttagcctcaagagggcggtagtggtgctgggtgcccGAGGAGGGGCTGAAGAGGTCAAGGGGGGGGTTGCTGGGCAACACGCACGCTTAGCCTAGCCCgtatgctaggtcatgtgtgttagctctgtacaaacGTAACTCTACGTGGTTaagctagcagcgttagctcgggagctccgtggctagcttgtgtgtgggggtgtgtgtgtgtgtgtaattagtaaaagaagaaagtttaaAGGAAGAggcactctgatcttagttatcgataatggccagccccctcagccactcaggtcTGGACCACACGTGTAGTtgggacagactgagactttttgACTTACTGAGGGAAACTTTGGTcattataaccactccagtggctaacagctgattcccGCAATGATCttgcagacagtaactaaactccgtgaaaggagtgatttagcaggtagcgcttacggttttacccagctacttaacacaacatatcaacagtatcgtgatcaatgatacattcacagaaacagattaataatcaagTATAGACCAATACATAATTAAAATCagagatcacattaatggcaacaagtggtagcgaaccctttgctcattaataaacaaaccaaacacactagttctaacatctgcccagaactgtgtaagcctcttacagtacatgtgttgtttgtagttaatctctcgccagagtttaacgatccgtttcgtccagaGCAGGGGACGACACGCGATCCAGGTCGACGACGCAAGAAAACGGAATGTAGTCCCTTTCTTGAATCcgggctgattaaacccgctgcagatagaggAAATACTGGGCCAGTATTCCTGGGATCCCCTTGTATATCAGAAAGATAGAAAATGTCCCAGCTCaatctcgaccagcgaggtgacgctggctagctagtccggactagtgcACCTCCTGTCAGTAAAATGGGTTACCGTGGAAAGCCAAGAGACACCAACggcgacagcttttatccttcctccacttcctagtggcggggtggtgcattcaaaggcccgacagccaatgggaaaagaGCAACcttgtcacaggtgtgaagcagttctttgtctcaccaccagtctgccttgacCTCCTCGTGTTGGAGGTAGATTCTCCATTTTGGCGACTCTGCTTCCAAGTGGCggcctgtaggagtttggtgaaactggctttgggattcacatgtaggccaagatcctttgtcttgccttccctgtttcctttgtttttggttAAAATCCATGTTTAACCCCCTGCTTGGTCCCaacattcgacatactatactatgactttttatgattttttcaacatactattctatgactttttatgactttattcgacatactatacgacTTTattcaacgtactatactatgacttatgattttttcaacatactattctatgactttgtAATTACTTTTCAACATGCTTTAcgctgacttttttatgactttttgacgtactatactatgactctttacgATTtctttggacatactatactatgactttttataacttttttcgacatacaatactgtgacttcttataatttttttaaatattctatACTAGGACATGATTTTTTGGGACAtactttattatgactttttaagactttattcgatatactatactatgactttttgattttttcaacatactattctatgactttttatgattttttggacatactatagtattacttttttaaatattctataccatgactttttgaaATAAGTTGTTCTTGAGTGTTTCCTGATGCAGTACGACACAGAAAACTGACAGTGTTATTAATACAACTCATTTTATTGAATAAAAGAAACATGAATAGGAAGATATCAAAATGAATCCTCTGGGTGTCTATGAGACAGTCAGATCCcactcttcatcatcatcagcctCGTCTTCATCAGGAGCAATCTCACTCCAGGAAACCTCGTTCACCTGAGACACAGTTCATCCTTACTTACAGGAAACATCTCTTTACACTACACAAtgataataatactaataataataatttgattttttttcgacatactatactatgactttttatgattttttttcgacatactattgtaGGATTATTTTGTTTAGAGTATAGTGTAAGGCCTCAGATTTCATGACCTgatattctctctctccctgttcttCTGGGCCATGACGAAGCCATCTAATCTGGGGAAGTGataagacatttttaaaattgaAGATGCAGCATTTGCTCGAAAAAGATAATTACAACTTGACCCAAAAAGAGGATTCCTTTCCCAGATGAACAGGGTGAAAGAACAATGGGACTGTGTTCACAAGCGGTGAGAAAAATGTGGTGAAGTCGTAAATGTCCTTGGCTTTTACTCCCCGGCAGAGAAAGATACGCAGGCGCCCAGTTGGGGCATTGTAAAATCTGTAACCAATGTCATCATAAAgtaacttaacccttgtgtggtccttcgggtcccagtgacccgaaggacaacacaaggatgatgtacttccctttactttgttgagaattgctctctaaaccctgtttcttgtaaagtaagtaagtaaagtttatttctagaacacatttaaacacagtttaagctgaccaaaatgctgtacaaacaagaactaaggtgctgtattaacccttgtttagagagcaattctcaacaaagtaaagggaagtacataatccttgtgttgtccttcgggtcactgggacccgaaggacaacacaagggttaatgttaAATGGCCGTGGATTGAGGAAGCCAAGGGGTTTCTGACACTTGTTGCAGAAATTGTAGCAAAAGGTCGAAGAGGACTGGACAGAAGAGCAGCCTGTCTGGATTCCATCCAACTGATAACAGCACCACGGATGAAGCAGAGGGAGTGGACAAAAAGTGAAGGCTCTGGGTTAGCCGGCATCAGATGCTGGGGGAATCTCTGTCTGTTTGCTAGGTTTTAGCGATAGGTTGTTTTGTCTTGAAGTAATcgggggcctgttgcacaaaagtagaatgaagaaatccaggataagtgaaaaagcgcagcttgacttagtgtgatccgctcatcgcggcttaatcggttgcacgtttgccgagccaggatcagacggtgaagctatgtcagccaggaggagatagctgggataagtgcacgttcacggctttcttaaatagaccacggtatccatcacagatttactgatgcagaaatggagaatacgtgtgcagcatatgtgcagcttctaatggaaatttacgaggaggtgaaacatataatatgcaaaaagggaaatacggctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218643 True 4512 lncRNA 0.41 2 37957943 37962475

Neighbor

gene id symbol gene type direction distance location
LOC120575386 NA coding upstream 28300 37885496 ~ 37929643 (+)
psmd3 psmd3 coding upstream 97425 37835320 ~ 37860518 (+)
LOC120575334 NA coding upstream 178149 37770241 ~ 37779794 (+)
LOC120575332 socs7,LOC102301327,LOC101475758,LOC102205792 coding upstream 733054 37193977 ~ 37224889 (+)
kpnb1 kpnb1 coding upstream 764592 37177075 ~ 37193351 (+)
LOC120575399 NA coding downstream 16505 37978980 ~ 37984499 (+)
LOC120575400 NA coding downstream 59299 38021774 ~ 38025116 (+)
LOC120575397 NA coding downstream 117618 38080093 ~ 38088521 (+)
samd14 LOC106528058,LOC104957522 coding downstream 197517 38159992 ~ 38202432 (+)
LOC120575395 NA coding downstream 304271 38266746 ~ 38268039 (+)
G161520 NA non-coding upstream 21224 37936273 ~ 37936719 (+)
G161505 NA non-coding upstream 155502 37802229 ~ 37802441 (+)
G161476 NA non-coding upstream 252002 37705619 ~ 37705941 (+)
G161442 NA non-coding upstream 270792 37635907 ~ 37687151 (+)
G161433 NA non-coding upstream 363959 37593626 ~ 37593984 (+)
G161535 NA non-coding downstream 32372 37994847 ~ 38009171 (+)
G161546 NA non-coding downstream 79291 38041766 ~ 38045025 (+)
G161558 NA non-coding downstream 107019 38069494 ~ 38074567 (+)
G161589 NA non-coding downstream 261631 38224106 ~ 38224407 (+)
G161590 NA non-coding downstream 277880 38240355 ~ 38242827 (+)
LOC120575390 NA other upstream 1507 37934062 ~ 37956436 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 838689 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1482471 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 1832391 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 2308959 35626515 ~ 35648984 (+)
G161714 NA other downstream 508239 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 808232 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 820142 38782617 ~ 38784044 (+)

Expression


Co-expression Network