G161590


Basic Information

Item Value
gene id G161590
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 38240355 ~ 38242827 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218714
CAAAAATATTATgcataaataacaaaataaataaaattattaaataaaaatctcAAACATTTAAAcccaaacatctgaaatataaataaatacaaataaacagaaacaaacattaTGGCAAACATTATGCTTCCTGTTTTACAATAAAAGCCTCCAAAGATTCACCAAAGGTTTTAATTCTCTACTTTGTTAATTGTTTAGGCGCGGAGCTTCTTGGGTTTTAAAAGAACTTGTTTCCCTTCAGTCTCTCTGACCGGAGCAGCAAATAAACACAGCAAAAGTTGTGTTACCGGGGAAACATCGCCTTCGTTTCAACATTAGTAACGCCGTTTACTCTAAGTTCAAACATACATATGTTATAAACAgactctgtttctgtctctctttagggcacagacagacagacacagagagacagagacagacagacagactgacagacagacagagagagagacacacagatagacagagaaagaaagacatttaGATATAAAACAGGATGAATCAATAAACATCATCAATCTTttggtataaaaataaaaactgaaaaatgtttcAAAACGGTTTTGTTCAAGAATAAATCAAATGTTGAATTGCTGTTGAATAATTTCCTGGAAATCCAGCTGAATCATCGATTAAGGACTgatatatctatatacataTCTTTGatttgtatataaaatatatataaataagtaaAGTGCTGCTGTGAGTCCGTGTGCAGTTCCTGCAGGTCTGAGCCTGTCCGTCTGTTCATCTCCTCATTCCTGAAACTTTCTCAACTTTACATTCCTGCTCGCCGTCTGGCGGAGGCTCAGAGATGCTGCAGGGGATCACAGCAGGAAGCagaccttcacaataaaagctcagCTTTCacatggaaataaataaataaataaataaatagataaattaAGCTTCAGCAGCGCTCACAAAGATCCTCTCTGCAGGAAGACGCTACCACTCTGAGGCATCTGTACTGTTCATGTTTAACATCTGTTCATGTTCAACATCTGTTCATATTCAACATCTGTTCAGGGTTCATCTTCAGGACAGGAAGTAACACAGTTACTTTAAATCTGCTTTCACAATAATTCTCAGTTCCCTCTTCACTGAGAAATGTTTCCAGCTCTCCACTGCTTTCCTGTTTCTCCTGCGAGTCTTTACAAACACAGAGATCCTCTTCACTCCGAGGCATCTGTACTGTTCATGCTCAACATCTTTTCATCTTCAGGACAGGAAGTAACACAGTTACTTTAAAACTGCTTTCACAATAAAGCTCAGTTCCATCTCTACTGAGAAATGTTCAACATCTGATCATGATCAACATCTGTTCACCGTTCATCCATTgaggctagaagggatacagctacgccgatgacagttaagtttagctaaaggatcgtggtttgggttaaaacactgcGAGGAATAAACACAAATTTCGTAATAGGTAATGTAGCGTAACTTCTCCTAACTAATGTAAGGTAGTAGCCTTGGGTCGGCCACTAGGGGCCGCAGTTGCCATTTTAATTACAGAGATAGTTCAGAAAATGTTGCTTTCTGTGTCCCTTAAAGCtggtacacaccaaccagacagccgaccctcggcagtaaagccagtgtgtctccccgagttggtccaaagagacgagacgtaatacgtctccataacagcaggcggcgctaatctgtattgttgcccaaaaaatgaaaactggcagctgattggacgaacgcgtcacatgggtttgttttctacggaaattcaaagccagactgtcatggctgcttgttcagaatccgatctcatattgtactaaaatagttcactaaaatgggtttctgaaaacattttaagagagaaataggccatgcagttcctgaatctgtcttcatttcagatcaacaaaggtcagtttaaaagattttcatcagattttgagagactctagtcacctcatcccgctcgccatttccgggtgagtccgaCTTCTTCAGACGCCTCAgccgttttttttattgactttaACTCAGCTCCGAGTAAAAAAATaggaatattttgagaaaaaaagtcaaatattttgaaCAATATTCCTTCAGACACCTCAGACAGCTTATTGTGTCCCTGCAGCGGAGTGGGTAGGGCTTTGCCTGTGCCTGCAGCAAAGTGGGCGGGGCTTTGCCTGTCCTGCAGCAGAGTGGGTGGGACTTTGCCTGTCCCTGCGGCAGAGTGGGCGGGACTTTGCCTGTCCCTGCGGCAGAGTGGGCGGGGCTTAGTGTGTCCCTGTGGAGCTAGGCAGCCTGTAGGCGGCGGAAGCTCTCAGGCTGCGCATCAGGTCGTGGCAGAAGGAGCGTAGCTGCGTCAGCGTCAGGTGCGCTGCCACCTGCACCTCGTAGTTACCATGGAGACGGGAGGCCAGGTCCAGACTCTGGTTCTGATCTGCTGCGTCGCCATCACCGAGCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218714 True 2473 lncRNA 0.42 1 38240355 38242827

Neighbor

gene id symbol gene type direction distance location
samd14 LOC106528058,LOC104957522 coding upstream 37923 38159992 ~ 38202432 (+)
LOC120575397 NA coding upstream 151834 38080093 ~ 38088521 (+)
LOC120575400 NA coding upstream 215239 38021774 ~ 38025116 (+)
LOC120575399 NA coding upstream 255856 37978980 ~ 37984499 (+)
LOC120575386 NA coding upstream 310712 37885496 ~ 37929643 (+)
LOC120575395 NA coding downstream 23919 38266746 ~ 38268039 (+)
LOC120575398 NA coding downstream 28523 38271350 ~ 38287654 (+)
LOC120575393 LOC103366924,LOC100704949,LOC102204201,LOC102307967 coding downstream 102282 38345109 ~ 38372796 (+)
LOC120575391 NA coding downstream 130426 38373253 ~ 38380324 (+)
LOC120575340 NA coding downstream 297657 38540484 ~ 38552483 (+)
G161589 NA non-coding upstream 15948 38224106 ~ 38224407 (+)
G161558 NA non-coding upstream 165788 38069494 ~ 38074567 (+)
G161546 NA non-coding upstream 195330 38041766 ~ 38045025 (+)
G161535 NA non-coding upstream 231184 37994847 ~ 38009171 (+)
G161523 NA non-coding upstream 277880 37957943 ~ 37962475 (+)
G161512 NA non-coding downstream 10129 38252956 ~ 38254040 (+)
LOC120575403 LOC103370772,LOC101481951 non-coding downstream 15290 38258117 ~ 38264333 (+)
G161682 NA non-coding downstream 56377 38299204 ~ 38351672 (+)
G161699 NA non-coding downstream 143972 38386799 ~ 38437964 (+)
LOC120575407 NA non-coding downstream 156516 38399343 ~ 38399685 (+)
LOC120575390 NA other upstream 283919 37934062 ~ 37956436 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 1121101 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1764883 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 2114803 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 2591371 35626515 ~ 35648984 (+)
G161714 NA other downstream 227887 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 527880 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 539790 38782617 ~ 38784044 (+)

Expression


Co-expression Network