LOC120575407


Basic Information

Item Value
gene id LOC120575407
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 38399343 ~ 38399685 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641982.1
aaaaaaaaagaaaaaaggaacagAGCCAGCCCCAACCAAAACCCTCCCAATTCCTCCAGAATACAACAACCGGAAGACAGTACAACAGTACAACACTAAAACAGTAGTGAACCATGAGAGTGATTCAGAGACTCCAGATGAGCTCTACTCGCAAGACATGTTTTTAGGCCCAAAACAAGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641982.1 True 182 lncRNA 0.43 3 38399343 38399685

Neighbor

gene id symbol gene type direction distance location
LOC120575391 NA coding upstream 19019 38373253 ~ 38380324 (+)
LOC120575393 LOC103366924,LOC100704949,LOC102204201,LOC102307967 coding upstream 26547 38345109 ~ 38372796 (+)
LOC120575398 NA coding upstream 111689 38271350 ~ 38287654 (+)
LOC120575395 NA coding upstream 131304 38266746 ~ 38268039 (+)
samd14 LOC106528058,LOC104957522 coding upstream 196911 38159992 ~ 38202432 (+)
LOC120575340 NA coding downstream 140799 38540484 ~ 38552483 (+)
LOC120575342 NA coding downstream 324147 38723832 ~ 38726454 (+)
LOC120573911 LOC104931894,LOC105903357 coding downstream 331881 38731566 ~ 38734680 (+)
G161682 NA non-coding upstream 47671 38299204 ~ 38351672 (+)
LOC120575403 LOC103370772,LOC101481951 non-coding upstream 135010 38258117 ~ 38264333 (+)
G161512 NA non-coding upstream 145303 38252956 ~ 38254040 (+)
G161590 NA non-coding upstream 156516 38240355 ~ 38242827 (+)
G161589 NA non-coding upstream 174936 38224106 ~ 38224407 (+)
G161669 NA non-coding downstream 27334 38427019 ~ 38429879 (+)
G161709 LOC101481951,LOC106951155,LOC102209345,LOC103146918,LOC106905942,LOC100703600,LOC102309113 non-coding downstream 36246 38435931 ~ 38441249 (+)
LOC120575412 NA non-coding downstream 80593 38480278 ~ 38485147 (+)
LOC120575413 NA non-coding downstream 134710 38534395 ~ 38540380 (+)
G161837 NA non-coding downstream 341622 38741307 ~ 38741536 (+)
LOC120575390 NA other upstream 442907 37934062 ~ 37956436 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 1280089 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1923871 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 2273791 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 2750359 35626515 ~ 35648984 (+)
G161714 NA other downstream 71029 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 371022 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 382932 38782617 ~ 38784044 (+)

Expression


Co-expression Network