G161669


Basic Information

Item Value
gene id G161669
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 38427019 ~ 38429879 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218825
tagagataggTGTCTGTGATTGGAGAAATTTTATGAAGCTAAAAGGCTAATCAGGAAGCCAAAAGGCTAACCCAGGCTAGTTAGCAGTTAGCCTGGGTTAAGGTTGGAGAAAGGCCCAGGAtgtgtttagcctagcttagcacaaagactggaagcaaaGGGAAACTACTACTTCAGGTGTGTCTATTTTGTCTTTCAGTGGGGTTAGGCTAGCAGTTTCCTTCTGTTTCCAgtatttgtgctaagctaggctaagctaGCAGTATCTGTACTGGAAACAGAGAGATGGAACTGATAATTTGACTCTGGAGAAAACAGAGGACTGTCTCAGTGTTTCTTCTTCTAATGTCATTTGAACTTTTCC

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process
GO:0030902 hindbrain development biological_process
GO:0005102 signaling receptor binding molecular_function
GO:0005515 protein binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218825 True 364 lncRNA 0.42 2 38427019 38429879

Neighbor

gene id symbol gene type direction distance location
LOC120575391 NA coding upstream 46695 38373253 ~ 38380324 (+)
LOC120575393 LOC103366924,LOC100704949,LOC102204201,LOC102307967 coding upstream 54223 38345109 ~ 38372796 (+)
LOC120575398 NA coding upstream 139365 38271350 ~ 38287654 (+)
LOC120575395 NA coding upstream 158980 38266746 ~ 38268039 (+)
samd14 LOC106528058,LOC104957522 coding upstream 224587 38159992 ~ 38202432 (+)
LOC120575340 NA coding downstream 110605 38540484 ~ 38552483 (+)
LOC120575342 NA coding downstream 293953 38723832 ~ 38726454 (+)
LOC120573911 LOC104931894,LOC105903357 coding downstream 301687 38731566 ~ 38734680 (+)
LOC120575407 NA non-coding upstream 27334 38399343 ~ 38399685 (+)
G161682 NA non-coding upstream 75347 38299204 ~ 38351672 (+)
LOC120575403 LOC103370772,LOC101481951 non-coding upstream 162686 38258117 ~ 38264333 (+)
G161512 NA non-coding upstream 172979 38252956 ~ 38254040 (+)
G161590 NA non-coding upstream 184192 38240355 ~ 38242827 (+)
G161709 LOC101481951,LOC106951155,LOC102209345,LOC103146918,LOC106905942,LOC100703600,LOC102309113 non-coding downstream 6052 38435931 ~ 38441249 (+)
LOC120575412 NA non-coding downstream 50399 38480278 ~ 38485147 (+)
LOC120575413 NA non-coding downstream 104516 38534395 ~ 38540380 (+)
G161837 NA non-coding downstream 311428 38741307 ~ 38741536 (+)
G161839 NA non-coding downstream 320917 38750796 ~ 38751798 (+)
LOC120575390 NA other upstream 470583 37934062 ~ 37956436 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 1307765 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1951547 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 2301467 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 2778035 35626515 ~ 35648984 (+)
G161714 NA other downstream 40835 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 340828 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 352738 38782617 ~ 38784044 (+)

Expression


Co-expression Network