G161512


Basic Information

Item Value
gene id G161512
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 38252956 ~ 38254040 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218621
TGTGAACAAACCCAAAGTGTTTTTATTCGTCAGAGTGAGAGAAACCAACAGTTCACAGGTTACAGCAGGAAAAcaggaagaagagaggagagggggattGTGGGTAATAACTGAGCTGCTGTCATCAGCGTGCAGGCAGGAAGTCAGCAGAGAGGATCATGGGAAGCTGTCGTCGTCATCTTCGGCCATTTCTTTGGCGAACTCCAGATCCTGCTGCTCACGCTCCCGACGCTcctgaacacagacacacagacagacagacagacacacacaacagaaggagacagagacagacagacagacagacagacagacacagaaagagacacacacacagagattggTTGTCTGGtcgcttaaaggggtgatagaatgattatatagggtatttcacactgttccttatggtctcctaatggggtatgtaacattagttgggctgaaaatggcctggttgatattttattggcccttatgcatccctgtgttttggccctatttgtaacaagagcttttcttccaaatatggtatagtcatgaatatttagatgagctgcgcgctgattggttgagcgacttgccatacgcacatattagagacgcgcactgattggttcagcgaatccccaatacacatacattagagaagcgacagaatcatcgtttcattaccaaattcacttctgagacttttttaagcgagaaatcaactatataaagctgaaatatgggccgttttacaaaaattgatggctagcTAATttcaaatttggtaagacgtgtcggactttaggagctccacacagtctgacgagaaagcggcagcctgctgggctccatacccagggcaaagtcaccctttgtggatactgcactacggggctccgcggccagctgccggcataactagaatatatttacggtttgaatttcgtcacgccacttatataacatcattccccaatgtcttataaagctaaccgttgtgtccgatttgattttaaggcatttttatgaacgcaaggcgtctctgtaggacgagcagctgcttgctatatgtcccattcattacaatggggaaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218621 True 1085 lncRNA 0.45 1 38252956 38254040

Neighbor

gene id symbol gene type direction distance location
samd14 LOC106528058,LOC104957522 coding upstream 50524 38159992 ~ 38202432 (+)
LOC120575397 NA coding upstream 164435 38080093 ~ 38088521 (+)
LOC120575400 NA coding upstream 227840 38021774 ~ 38025116 (+)
LOC120575399 NA coding upstream 268457 37978980 ~ 37984499 (+)
LOC120575386 NA coding upstream 323313 37885496 ~ 37929643 (+)
LOC120575395 NA coding downstream 12706 38266746 ~ 38268039 (+)
LOC120575398 NA coding downstream 17310 38271350 ~ 38287654 (+)
LOC120575393 LOC103366924,LOC100704949,LOC102204201,LOC102307967 coding downstream 91069 38345109 ~ 38372796 (+)
LOC120575391 NA coding downstream 119213 38373253 ~ 38380324 (+)
LOC120575340 NA coding downstream 286444 38540484 ~ 38552483 (+)
G161590 NA non-coding upstream 10129 38240355 ~ 38242827 (+)
G161589 NA non-coding upstream 28549 38224106 ~ 38224407 (+)
G161558 NA non-coding upstream 178389 38069494 ~ 38074567 (+)
G161546 NA non-coding upstream 207931 38041766 ~ 38045025 (+)
G161535 NA non-coding upstream 243785 37994847 ~ 38009171 (+)
LOC120575403 LOC103370772,LOC101481951 non-coding downstream 4077 38258117 ~ 38264333 (+)
G161682 NA non-coding downstream 45164 38299204 ~ 38351672 (+)
G161699 NA non-coding downstream 132759 38386799 ~ 38437964 (+)
LOC120575407 NA non-coding downstream 145303 38399343 ~ 38399685 (+)
G161669 NA non-coding downstream 172979 38427019 ~ 38429879 (+)
LOC120575390 NA other upstream 296520 37934062 ~ 37956436 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 1133702 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1777484 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 2127404 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 2603972 35626515 ~ 35648984 (+)
G161714 NA other downstream 216674 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 516667 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 528577 38782617 ~ 38784044 (+)

Expression


Co-expression Network