G161699


Basic Information

Item Value
gene id G161699
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 38386799 ~ 38437964 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218861
ttccctaaaggttctcttaaggttattttttttttaccttcagcTAACCTTCTCtgaacgttccctaaaggttctcTTAAGGTTATTTATTACAtagcttggttgaattctaatgtagaatgcggtctgttatttcttgataacagaccgctgctaaggataacacaccgttgccatgcaaaagcagagcgttgccatggacgcagttctgttcactctggaggacagctatcaatcaatccgctgaaagaagtccggataatttagcctatcagctgtggcaaaaagtggggaaacgTGGAGCAACTTCTGTCCTCCAATTCAAGCAATGACAGCAGATCTGATGAGCGTCTATCGCTAGTATCTTTCTATACCGTCTatcaggggcggatctagaaaaatatttatggggtggcgagaggggggcaggaatttttgaggggtggcaacatatgtcagacgtatatttactgaatttaatcagttatcacagtttgatgagaaatagtatgtacacactacaaaagggcacaggctgccatttacaaactcatacagacaaacttcatctcatgcaatcagtgtcctgcattagaggtttcatttgaaacagttcatattaggaataagtgaccgtacaatgtgatctcacttaataggagatatagaagtatgatagaagtaaggggcattatcacaggaaaggcattaagttaagacacaggtgatgagaggcagatgtgtgagaggggaagcaaactgTTTTGGACTGTGTCAGAGAGGAAGCGTTGCAGGCAGCATTTGCACAAAATTAGGAACTGTCATTGATTAGTTATAACCATTAaactgtgttaacacacactaacattttagcctgggagagtatttttaggttcatttgtttattttttgttttatttatatatattttttattttttatatttaatctgagcaatagatctaaaatacattctacacaaaatataaaaacccccatctcatcaaactttcacactgacaactttccctaattattcatatttaagctttgtcatttgttgttcttattcatatctAACTTAGTATACTATGCATCAACAATTTCCATACCGTGTGGACCAGCTTGACTGGAGATGGTTGGTGATGGCCCAGGCACTCTGCTTTCCCTTTCACTGTCTGAGCCCTGCACCTTCTCTTGTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218861 True 1204 lncRNA 0.39 2 38386799 38437964

Neighbor

gene id symbol gene type direction distance location
LOC120575391 NA coding upstream 6475 38373253 ~ 38380324 (+)
LOC120575393 LOC103366924,LOC100704949,LOC102204201,LOC102307967 coding upstream 14003 38345109 ~ 38372796 (+)
LOC120575398 NA coding upstream 99145 38271350 ~ 38287654 (+)
LOC120575395 NA coding upstream 118760 38266746 ~ 38268039 (+)
samd14 LOC106528058,LOC104957522 coding upstream 184367 38159992 ~ 38202432 (+)
LOC120575340 NA coding downstream 102520 38540484 ~ 38552483 (+)
LOC120575342 NA coding downstream 285868 38723832 ~ 38726454 (+)
LOC120573911 LOC104931894,LOC105903357 coding downstream 293602 38731566 ~ 38734680 (+)
G161682 NA non-coding upstream 35127 38299204 ~ 38351672 (+)
LOC120575403 LOC103370772,LOC101481951 non-coding upstream 122466 38258117 ~ 38264333 (+)
G161512 NA non-coding upstream 132759 38252956 ~ 38254040 (+)
G161590 NA non-coding upstream 143972 38240355 ~ 38242827 (+)
G161589 NA non-coding upstream 162392 38224106 ~ 38224407 (+)
LOC120575412 NA non-coding downstream 42314 38480278 ~ 38485147 (+)
LOC120575413 NA non-coding downstream 96431 38534395 ~ 38540380 (+)
G161837 NA non-coding downstream 303343 38741307 ~ 38741536 (+)
G161839 NA non-coding downstream 312832 38750796 ~ 38751798 (+)
G161841 NA non-coding downstream 328138 38766102 ~ 38766373 (+)
LOC120575390 NA other upstream 430363 37934062 ~ 37956436 (+)
utp18 utp18,LOC102793997,LOC101163956 other upstream 1267545 37103373 ~ 37119254 (+)
LOC120574801 NA other upstream 1911327 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 2261247 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 2737815 35626515 ~ 35648984 (+)
G161714 NA other downstream 32750 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 332743 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 344653 38782617 ~ 38784044 (+)

Expression


Co-expression Network