G160422


Basic Information

Item Value
gene id G160422
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 34652435 ~ 34673402 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU217200
CCTGGGGCGAGATGcggctcagtgtgtgtgtgtgtgtgtgactgtctggGTTAACACACACCAGCCGTCCCCTCAACGCACTTTTAACTTTATTTAGTAAATCCAGAAACCCGCCATCATGGACCTGGACCCGGCCGTCATCATCCCCGCCATCATTTTCACCGTCGTCGCCGTTTATTTCGCTTCTTCGTACCTGAACAAGAAGCCCGACTCCTCCGGCTCCGCAGCCGGGAAGAAGAAGCCTAAAGTCGGCTACGGAGACGACGTCCCCCGTCCAGAGCTCTGGCTCCGCGGCTCCCGGCGGAGAAGATCCCTGTTAAgGTTGCCCCAGAGCCGGTAAAAGCACCAAAACCTGCACCAGAGCCTGTAAAAGCACCAAAACCTGTTCCTGAACCAGTAAAAGCGCCAGAACCTGCCCCAGAGCCAGTAAAAGCACCAGAACCTGCACCAGAGCCGGTGAAAGCAGCACCAGAACCTGCACCAGAGCCGGTGAACGCAGCACCAGAACCTGCACCAGAGCCGGAAAAAGCACCAGAACCTGCCCCAGAGCCGGTAAAAGCACCAGAACCTGCACCAGAACCTGCACCAGAACCTGCACCAGAGCCGGTAAAAGCACCAGAACCTCCCCCAGAGCCGGTAAAAGCACCAGAACCTGCACCAGAGCCGGTAAAAGTGCCAGAGATTGTACCAGAACCTGAACTTGTCCCAGAAACAGTTGCAACACAAGAACTGGCTGCAGTACCTGAACCTGTGTCCGAACCTGAACCTGTCCCAGAGCCAGCTGCAGTGCCAGAACCTGCATCTGAGCCCGAACCCGAGCCCGAACCTGTCCCAGAGCCAGTCACAGTGCCTGATCCAGAGCCTGTGGCCGAGTCCGAACCTGAACCTGTCGAGGAGGTCTTACCTGAGCCGACGCCTGAACCTGCTGTAGAGGAATCACCAGAACCGGAACCAGAGACCGTCCTAAACAACGatgtGGCTGCAGCAGAAGAGAAAGTGACGTTCACCCCGGGGAAGAAGCAGAGCAAGTTTGAGACGCTGATGACgaaggaggagatggaggaggagcagagGGCTCCTGAATGATTCACACGAGACGTAGAAACACCTTcagcttctttctctttctttctcccggCTGACCCGCCGCGAGGAAGACAGCGAGCGCTGAAGCAACGGAACCGAGCGTCTTTTTATTTCTGGGTTTTCGAGAGCGTTCTGGTCCGAGCTGCTTGTGAATAGCTTAACGTCTTTACACCAAAGTGCCTTCAGGAAGCTGTGTTTTTACCCCAAAACTGTTCTGCTTTTAGCTTTTTGTGTCGaggattttttaaaacaaagggATGAAATCGGAGGAAACAGACAGAAGCTGTGTTTGGAACGGtttcccctcacacacacacactccacagacacactcttcacacacaaacacgcacagacacacacacacagaaacacacacacacctccccccCAATAGAAGTATTATGCTAGGGAACAGTTTGTAACACAGCTCGTGTGGACTTGTTGGACCCTTTGTTAAAACTATTAAACTGTGATTTGAATGAAGACTCTACCAGTAATAAACTGTCAGCCTGATGTTCTTACAGGAACTACGGTAGTCATCTTGTGTTTGATTGAAATGTTTCAACatgcaataaataaatgaataaatccaTGTGTGAAACCAGACGG
>TU217201
CCTGGGGCGAGATGcggctcagtgtgtgtgtgtgtgtgtgactgtctggGTTAACACACACCAGCCGTCCCCTCAACGCACTTTTAACTTTATTTAGTAAATCCAGAAACCCGCCATCATGGACCTGGACCCGGCCGTCATCATCCCCGCCATCATTTTCACCGTCGTCGCCGTTTATTTCGCTTCTTCGTACCTGAACAAGAAGCCCGACTCCTCCGGCTCCGCAGCCGGGAAGAAGAAGCCTAAAGTCGGCTACGGAGACGACGTCCCCCGTCCAGAGCTCTGGCTCCGCGGCTCCCGGCGGAGAAGATCCCTGTTAAgGTTGCCCCAGAGCCGGTAAAAGCACCAAAACCTGCACCAGAGCCTGTAAAAGCACCAAAACCTGTTCCTGAACCAGTAAAAGCGCCAGAACCTGCCCCAGAGCCAGTAAAAGCACCAGAACCTGCACCAGAGCCGGTGAAAGCAGCACCAGAACCTGCACCAGAGCCGGTGAACGCAGCACCAGAACCTGCACCAGAGCCGGAAAAAGCACCAGAACCTGCCCCAGAGCCGGTAAAAGCACCAGAACCTGCACCAGAACCTGCACCAGAACCTGCACCAGAGCCGGTAAAAGCACCAGAACCTCCCCCAGAGCCGGTAAAAGCACCAGAACCTGCACCAGAGCCGGTAAAAGTGCCAGAGATTGTACCAGAACCTGAACTTGTCCCAGAAACAGTTGCAACACAAGAACTGGCTGCAGTACCTGAACCTGTGTCCGAACCTGAACCTGTCCCAGAGCCAGCTGCAGTGCCAGAACCTGCATCTGAGCCCGAACCCGAGCCCGAACCTGTCCCAGAGCCAGTCACAGTGCCTGATCCAGAGCCTGTGGCCGAGTCCGAACCTGAACCTGTCGAGGAGGTCTTACCTGAGCCGACGCCTGAACCTGCTGTAGAGGAATCACCAGAACCGGAACCAGAGACCGTCCTAAACAACGatgtGGCTGCAGCAGAAGAGAAAGTGACGTTCACCCCGGGGAAGAAGCAGAGCAAGTTTGAGACGCTGATGACgaaggaggagatggaggaggagcagagGGTGCAACAGGAGCAGCTGGCAGCCATCTTCCAGCTGCTGCGGGAGAACCAGGAGGCGCTGGGGGGGGTGACGGAGGGAGACATGGAGGAGCAGCTGAAGCTCTACTCCCTCTGACAAGGACAACATTTAAAGattcaaactttttttagtttaaaatgtAAACGTCAGGGCCATGGGCTCATGTAGCAACTGGAAgtgttgcattgtggtatatattttattatgaggGAAAAGACGAATGCATAAATTG
>TU217202
CCTGGGGCGAGATGcggctcagtgtgtgtgtgtgtgtgtgactgtctggGTTAACACACACCAGCCGTCCCCTCAACGCACTTTTAACTTTATTTAGTAAATCCAGAAACCCGCCATCATGGACCTGGACCCGGCCGTCATCATCCCCGCCATCATTTTCACCGTCGTCGCCGTTTATTTCGCTTCTTCGTACCTGAACAAGAAGCCCGACTCCTCCGGCTCCGCAGCCGGGAAGAAGAAGCCTAAAGTCGGCTACGGAGACGACGTCCCCCGTCCAGAGCTCTGGCTCCGCGGCTCCCGGCGGAGAAGATCCCTGTTAAgGTTGCCCCAGAGCCGGTAAAAGCACCAAAACCTGCACCAGAGCCTGTAAAAGCACCAAAACCTGTTCCTGAACCAGTAAAAGCGCCAGAACCTGCCCCAGAGCCAGTAAAAGCACCAGAACCTGCACCAGAGCCGGTGAAAGCAGCACCAGAACCTGCACCAGAGCCGGTGAACGCAGCACCAGAACCTGCACCAGAGCCGGAAAAAGCACCAGAACCTGCCCCAGAGCCGGTAAAAGCACCAGAACCTGCACCAGAACCTGCACCAGAGCCGGTAAAAGTGCCAGAGATTGTACCAGAACCTGAACTTGTCCCAGAAACAGTTGCAACACAAGAACTGGCTGCAGTACCTGAACCTGTGTCCGAACCTGAACCTGTCCCAGAGCCAGCTGCAGTGCCAGAACCTGCATCTGAGCCCGAACCCGAGCCCGAACCTGTCCCAGAGCCAGTCACAGTGCCTGATCCAGAGCCTGTGGCCGAGTCCGAACCTGAACCTGTCGAGGAGGTCTTACCTGAGCCGACGCCTGAACCTGCTGTAGAGGAATCACCAGAACCGGAACCAGAGACCGTCCTAAACAACGatgtGGCTGCAGCAGAAGAGAAAGTGACGTTCACCCCGGGGAAGAAGCAGAGCAAGTTTGAGACGCTGATGACgaaggaggagatggaggaggagcagagGGCTCCTGAATGATTCACACGAGACGTAGAAACACCTTcagcttctttctctttctttctcccggCTGACCCGCCGCGAGGAAGACAGCGAGCGCTGAAGCAACGGAACCGAGCGTCTTTTTATTTCTGGGTTTTCGAGAGCGTTCTGGTCCGAGCTGCTTGTGAATAGCTTAACGTCTTTACACCAAAGTGCCTTCAGGAAGCTGTGTTTTTACCCCAAAACTGTTCTGCTTTTAGCTTTTTGTGTCGaggattttttaaaacaaagggATGAAATCGGAGGAAACAGACAGAAGCTGTGTTTGGAACGGtttcccctcacacacacacactccacagacacactcttcacacacaaacacgcacagacacacacacacagaaacacacacacacctccccccCAATAGAAGTATTATGCTAGGGAACAGTTTGTAACACAGCTCGTGTGGACTTGTTGGACCCTTTGTTAAAACTATTAAACTGTGATTTGAATGAAGACTCTACCAGTAATAAACTGTCAGCCTGATGTTCTTACAGGAACTACGGTAGTCATCTTGTGTTTGATTGAAATGTTTCAACatgcaataaataaatgaataaatccaTGTGTGAAACCAGACGG
>TU217206
CCTGGGGCGAGATGcggctcagtgtgtgtgtgtgtgtgtgactgtctggGTTAACACACACCAGCCGTCCCCTCAACGCACTTTTAACTTTATTTAGTAAATCCAGAAACCCGCCATCATGGACCTGGACCCGGCCGTCATCATCCCCGCCATCATTTTCACCGTCGTCGCCGTTTATTTCGCTTCTTCGTACCTGAACAAGAAGCCCGACTCCTCCGGCTCCGCAGCCGGGAAGAAGAAGCCTAAAGTCGGCTACGGAGACGACGTCCCCCGTCCAGAGCTCTGGCTCCGCGGCTCCCGGCGGAGAAGATCCCTGTTAAgGTTGCCCCAGAGCCGGTAAAAGCACCAAAACCTGCACCAGAGCCTGTAAAAGCACCAAAACCTGTTCCTGAACCAGTAAAAGCGCCAGAACCTGCCCCAGAGCCAGTAAAAGCACCAGAACCTGCACCAGAGCCGGTGAAAGCAGCACCAGAACCTGCACCAGAGCCGGTGAACGCAGCACCAGAACCTGCACCAGAGCCGGAAAAAGCACCAGAACCTGCCCCAGAGCCGGTAAAAGCACCAGAACCTGCACCAGAGCCGGTAAAAGCACCAGAACCTCCCCCAGAGCCGGTAAAAGCACCAGAACCTGCACCAGAGCCGGTAAAAGTGCCAGAGATTGTACCAGAACCTGAACTTGTCCCAGAAACAGTTGCAACACAAGAACTGGCTGCAGTACCTGAACCTGTGTCCGAACCTGAACCTGTCCCAGAGCCAGCTGCAGTGCCAGAACCTGCATCTGAGCCCGAACCCGAGCCCGAACCTGTCCCAGAGCCAGTCACAGTGCCTGATCCAGAGCCTGTGGCCGAGTCCGAACCTGAACCTGTCGAGGAGGTCTTACCTGAGCCGACGCCTGAACCTGCTGTAGAGGAATCACCAGAACCGGAACCAGAGACCGTCCTAAACAACGatgtGGCTGCAGCAGAAGAGAAAGTGACGTTCACCCCGGGGAAGAAGCAGAGCAAGTTTGAGACGCTGATGACgaaggaggagatggaggaggagcagagGGCTCCTGAATGATTCACACGAGACGTAGAAACACCTTcagcttctttctctttctttctcccggCTGACCCGCCGCGAGGAAGACAGCGAGCGCTGAAGCAACGGAACCGAGCGTCTTTTTATTTCTGGGTTTTCGAGAGCGTTCTGGTCCGAGCTGCTTGTGAATAGCTTAACGTCTTTACACCAAAGTGCCTTCAGGAAGCTGTGTTTTTACCCCAAAACTGTTCTGCTTTTAGCTTTTTGTGTCGaggattttttaaaacaaagggATGAAATCGGAGGAAACAGACAGAAGCTGTGTTTGGAACGGtttcccctcacacacacacactccacagacacactcttcacacacaaacacgcacagacacacacacacagaaacacacacacacctccccccCAATAGAAGTATTATGCTAGGGAACAGTTTGTAACACAGCTCGTGTGGACTTGTTGGACCCTTTGTTAAAACTATTAAACTGTGATTTGAATGAAGACTCTACCAGTAATAAACTGTCAGCCTGATGTTCTTACAGGAACTACGGTAGTCATCTTGTGTTTGATTGAAATGTTTCAACatgcaataaataaatgaataaatccaTGTGTGAAACCAGACGG
>TU217207
CCTGGGGCGAGATGcggctcagtgtgtgtgtgtgtgtgtgactgtctggGTTAACACACACCAGCCGTCCCCTCAACGCACTTTTAACTTTATTTAGTAAATCCAGAAACCCGCCATCATGGACCTGGACCCGGCCGTCATCATCCCCGCCATCATTTTCACCGTCGTCGCCGTTTATTTCGCTTCTTCGTACCTGAACAAGAAGCCCGACTCCTCCGGCTCCGCAGCCGGGAAGAAGAAGCCTAAAGTCGGCTACGGAGACGACGTCCCCCGTCCAGAGCTCTGGCTCCGCGGCTCCCGGCGGAGAAGATCCCTGTTAAgGTTGCCCCAGAGCCGGTAAAAGCACCAAAACCTGCACCAGAGCCTGTAAAAGCACCAAAACCTGTTCCTGAACCAGTAAAAGCGCCAGAACCTGCCCCAGAGCCAGTAAAAGCACCAGAACCTGCACCAGAACCTGCACCAGAGCCGGTAAAAGCACCAGAACCTCCCCCAGAGCCGGTAAAAGCACCAGAACCTGCACCAGAGCCGGTAAAAGTGCCAGAGATTGTACCAGAACCTGAACTTGTCCCAGAAACAGTTGCAACACAAGAACTGGCTGCAGTACCTGAACCTGTGTCCGAACCTGAACCTGTCCCAGAGCCAGCTGCAGTGCCAGAACCTGCATCTGAGCCCGAACCCGAGCCCGAACCTGTCCCAGAGCCAGTCACAGTGCCTGATCCAGAGCCTGTGGCCGAGTCCGAACCTGAACCTGTCGAGGAGGTCTTACCTGAGCCGACGCCTGAACCTGCTGTAGAGGAATCACCAGAACCGGAACCAGAGACCGTCCTAAACAACGatgtGGCTGCAGCAGAAGAGAAAGTGACGTTCACCCCGGGGAAGAAGCAGAGCAAGTTTGAGACGCTGATGACgaaggaggagatggaggaggagcagagGGCTCCTGAATGATTCACACGAGACGTAGAAACACCTTcagcttctttctctttctttctcccggCTGACCCGCCGCGAGGAAGACAGCGAGCGCTGAAGCAACGGAACCGAGCGTCTTTTTATTTCTGGGTTTTCGAGAGCGTTCTGGTCCGAGCTGCTTGTGAATAGCTTAACGTCTTTACACCAAAGTGCCTTCAGGAAGCTGTGTTTTTACCCCAAAACTGTTCTGCTTTTAGCTTTTTGTGTCGaggattttttaaaacaaagggATGAAATCGGAGGAAACAGACAGAAGCTGTGTTTGGAACGGtttcccctcacacacacacactccacagacacactcttcacacacaaacacgcacagacacacacacacagaaacacacacacacctccccccCAATAGAAGTATTATGCTAGGGAACAGTTTGTAACACAGCTCGTGTGGACTTGTTGGACCCTTTGTTAAAACTATTAAACTGTGATTTGAATGAAGACTCTACCAGTAATAAACTGTCAGCCTGATGTTCTTACAGGAACTACGGTAGTCATCTTGTGTTTGATTGAAATGTTTCAACatgcaataaataaatgaataaatccaTGTGTGAAACCAGACGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217200 True 1698 lncRNA 0.52 4 34652435 34672741
TU217201 False 1324 lncRNA 0.55 4 34652435 34673402
TU217202 False 1626 lncRNA 0.52 5 34652435 34672741
TU217206 False 1674 lncRNA 0.52 5 34652435 34672741
TU217207 False 1560 lncRNA 0.52 5 34652435 34672741

Neighbor

gene id symbol gene type direction distance location
jmjd6 jmjd6 coding upstream 4808 34642508 ~ 34647627 (+)
LOC120574912 NA coding upstream 48654 34593951 ~ 34603781 (+)
LOC120574921 NA coding upstream 101720 34535960 ~ 34550715 (+)
LOC120574915 NA coding upstream 129735 34519324 ~ 34522700 (+)
LOC120575309 LOC107740693 coding upstream 356013 34290886 ~ 34296422 (+)
LOC120574900 NA coding downstream 32677 34706079 ~ 34986840 (+)
LOC120574909 NA coding downstream 117326 34790728 ~ 34819071 (+)
LOC120574911 LOC101470943,LOC102790796 coding downstream 146371 34819773 ~ 34828565 (+)
LOC120574908 NA coding downstream 164412 34837814 ~ 34847768 (+)
casc3 LOC106600823 coding downstream 426720 35100122 ~ 35116962 (+)
G160424 NA non-coding upstream 2610 34647698 ~ 34649825 (+)
LOC120574936 NA non-coding upstream 11334 34639825 ~ 34641101 (+)
G160420 NA non-coding upstream 11801 34640186 ~ 34640634 (+)
G160402 NA non-coding upstream 46817 34549630 ~ 34605618 (+)
LOC120574933 NA non-coding upstream 371069 34279146 ~ 34281366 (+)
G160426 NA non-coding downstream 11249 34684651 ~ 34684959 (+)
G160437 NA non-coding downstream 95347 34768749 ~ 34789364 (+)
G160449 NA non-coding downstream 134206 34807608 ~ 34807815 (+)
G160450 NA non-coding downstream 134729 34808131 ~ 34808663 (+)
G160459 NA non-coding downstream 159249 34832651 ~ 34832872 (+)
G160318 LOC104961098 other upstream 468774 34183099 ~ 34183661 (+)
G160243 NA other upstream 484789 34167080 ~ 34167646 (+)
LOC120574293 NA other upstream 1109274 33463255 ~ 33543161 (+)
LOC120574300 NA other upstream 1340830 33307453 ~ 33311605 (+)
G159938 NA other upstream 1489624 33162395 ~ 33162811 (+)
LOC120574901 NA other downstream 176187 34849589 ~ 34928475 (+)
G160423 mvp other downstream 288698 34962100 ~ 34966949 (+)
LOC120575316 NA other downstream 372315 35045717 ~ 35055656 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other downstream 953113 35626515 ~ 35648984 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other downstream 1416218 36089620 ~ 36125552 (+)

Expression


Co-expression Network