LOC120575436 (LOC102235047,LOC107085218,LOC108249238,LOC103371580,LOC106934529,LOC106528082,LOC103146874)


Basic Information

Item Value
gene id LOC120575436
gene name LOC102235047,LOC107085218,LOC108249238,LOC103371580,LOC106934529,LOC106528082,LOC103146874
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 35180240 ~ 35185392 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826228.1
AGCTTCTCTCCGGCTGTTCGACCTCGGTGATCACTTCCCCGCAGCCCGTCTTCACAAGTTCTCCTCAACCCGAAACCAAGCCGTCTCTCTGTCGACATGGAGCGCACCTTCATCGCCGTGAAGCCCGATGGCGTCCAGAGAGGACTCATCGGAGAGATCATCAAGCGCTTCGAGACCCGAGGCTTCAAGCTGGTGGCGTCCAAGTTCATGAAGGCCTCTGAGGATTTCATGAAGACCCACTACCTGGACCTGAAGGACATGCCTTTCTATGCTGGACTCTGCAAATACATGTCCTCCGGACCCGTCTTTGCCATGGTGTGGGAGGGTCAGAACATTGTGAAGCTGGCCAGGATGATGCTGGGCGAGACCAACCCCGCTGACTCCAAGCCCGGCAGCATCCGTGGAGACCTGTGCATCAACATCGGCAGGAACATCATCCACGGCAGCGATACCCTGGAGAACGCCAAGCGTGAGGTCGGCCTGTGGTTCAAGGCCGAGGAGTTCGTCGAGTGGACACCCTGCGCCCAGCCCTTCCTGTATGAGTAAACTA

Function

NR:

description
nucleoside diphosphate kinase B-like

GO: NA

KEGG:

id description
K00940 ndk, NME; nucleoside-diphosphate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826228.1 True 550 mRNA 0.58 5 35180240 35185392

Neighbor

gene id symbol gene type direction distance location
rapgefl1 rapgefl1,LOC106600822 coding upstream 19192 35125469 ~ 35161048 (+)
casc3 LOC106600823 coding upstream 63278 35100122 ~ 35116962 (+)
LOC120574900 NA coding upstream 193400 34706079 ~ 34986840 (+)
LOC120573884 NA coding downstream 41844 35227236 ~ 35245200 (+)
trnas-uga_23 NA coding downstream 51904 35237296 ~ 35237377 (+)
LOC120574781 NA coding downstream 106284 35291676 ~ 35298784 (+)
LOC120575320 NA coding downstream 245855 35431247 ~ 35432159 (+)
LOC120574795 NA coding downstream 344745 35530137 ~ 35534660 (+)
G160631 NA non-coding upstream 9995 35164593 ~ 35170245 (+)
G160630 NA non-coding upstream 25870 35135057 ~ 35154370 (+)
G160626 NA non-coding upstream 60806 35116985 ~ 35119434 (+)
LOC120574935 NA non-coding upstream 112044 35055948 ~ 35068196 (+)
G160489 NA non-coding upstream 168090 35010660 ~ 35012150 (+)
G160647 LOC107085226,LOC102219492,LOC106934530,LOC103469014,LOC106917392 non-coding downstream 10529 35195921 ~ 35196157 (+)
G160651 NA non-coding downstream 31800 35217192 ~ 35218829 (+)
LOC120574814 NA non-coding downstream 155762 35341154 ~ 35341814 (+)
G160700 NA non-coding downstream 284147 35469539 ~ 35477069 (+)
G160691 NA non-coding downstream 481185 35666577 ~ 35691540 (+)
LOC120575316 NA other upstream 124584 35045717 ~ 35055656 (+)
G160423 mvp other upstream 213291 34962100 ~ 34966949 (+)
LOC120574901 NA other upstream 251765 34849589 ~ 34928475 (+)
G160318 LOC104961098 other upstream 996579 34183099 ~ 34183661 (+)
G160243 NA other upstream 1012594 34167080 ~ 34167646 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other downstream 441123 35626515 ~ 35648984 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other downstream 904228 36089620 ~ 36125552 (+)
LOC120574801 NA other downstream 1284214 36469606 ~ 36475472 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 1917981 37103373 ~ 37119254 (+)
LOC120575390 NA other downstream 2748670 37934062 ~ 37956436 (+)

Expression


Co-expression Network