LOC120575300


Basic Information

Item Value
gene id LOC120575300
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 33566470 ~ 33569127 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826020.1
ATGCATGACATGAGCATTGTTGAAGAGGAGTTGAATGAAAATACCTTCAACGACCCCATGAACAGTGTAATGGGTGGTGCGCTGAAGGGAGCACAGGTAATTGATAATCTGCCAACTATCGGGATCGCTGAGACTGTGCACGACCTGCCTGCCCCTGAAGTCCCTTCTGATGAGCCCCCAAGTCTCGAGCTGCCAATTTTGCCAGGCCCTCAGAAGGTCCTCAGTGAGGATGACATTGTTGGCGTCAGAGCATCAGTGCTCTATGAGAACTGCTTGAGGCAGCTTGTCACATTTTTAATTCTGCCCGTGGACAGATGCACTGGTGTATTGAGGACTGGTTTGGTGTGTGACAGTGTTGCCCCCTTTCCAACAAACATCGCCATCAGGGGCACTGCAATGAGCGTTGAATGGATCTGCCCCAATGGACATTGCCTATGGCGGTGGAACTCCCAGCCTGTGTTGAAGTTTGGCATGCAGACTGGGGACTTTCTTCTTTCCACAAACATCTTACTCTCCGGAAACAACTACACTAAAGTTGCTCTCCTCCTCAAATTCATGAACATGCGAATGGTCAACCCTAACACACACTTCACCATCCAGGACAGCTATTGTGTTGACCCTATAAAAACATTCTGGGAAGAGAAGAGATCTGAGGCCATCAGCCGACTTCAAGGGAAAGATGTGGTACTCCTAGGTGATGGCAGAAATGACTCACCAGGGCATTCTGCACAATACTGCAGCTACACGACCATGGAGCTTGACTCTAAGGAAATTGTCTATGTGGCCACTATAGACAAGCGACAGACCAACTGGAACTCCAATATCATGGAGAAGGAGGGTTTTATCCAGACTGTGGACAAGCTTACCCAAGACCTAAAGGTAGTGGAGTTCTGCATGGATGCTCATGTCCAGATTGCAGCCCTTTTGAACCCAGACAAAGGCAGATATAAGGATCTGAGAATTCACCACAGCCTGGACATGTGGGCAGGAAAGGTGAAAGGACAGTCTCTTCTCATTCACTGGCTGAGGGATATAGTTAACCATTTCTGGTGGTGCTGCAAGACAGCAGAGACATTTCAGCAGTTTCTTGCACTTTGGATTGGAGTTCTGCATCATGTTTGCAACAATCACACCTGGGAAACGGGAAGCTGCCAACACGATCACCTTGAAGACACTCAGGGTAAACAGTGGATTGAGAGAGATTCGAAGAGCCACAAAGCACTAGTGGACATCGTCCTCAACAAACGCTGGCAGAAGGATGTCCACAAGTATCTGCGCTTCAGATCAACTGCACATCTTGAGTCATTTCAGAATCACATTCTGATGTATGCCAGCAAGCGCCAGGCCTTCACTCCCCGAGTGTATGACTCAAGAGTTGTGCTCGCAGCTCTGGACTACAATTTCCACCGCGAACAGCCAACATACCGGACAGCAGAGGGCCAACAAtcttag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826020.1 True 1452 mRNA 0.49 9 33566470 33569127

Neighbor

gene id symbol gene type direction distance location
LOC120575298 LOC106591577,LOC106596222,LOC106591186,LOC106574345,LOC106604344,LOC106574346 coding upstream 55347 33509107 ~ 33511123 (+)
LOC120574295 NA coding upstream 514454 33038717 ~ 33052016 (+)
LOC120574734 LOC105899973,LOC106607192 coding upstream 939789 32606839 ~ 32626681 (+)
LOC120574291 LOC103393542,LOC105013241,LOC106600850 coding upstream 1140099 32410079 ~ 32426371 (+)
LOC120574894 LOC104927160,LOC101485211,LOC102310132,LOC102784865 coding upstream 1256977 32279167 ~ 32309493 (+)
trnap-cgg_4 NA coding downstream 26181 33595308 ~ 33595379 (+)
trnap-agg_18 NA coding downstream 50010 33619137 ~ 33619207 (+)
trnap-agg_19 NA coding downstream 64938 33634065 ~ 33634138 (+)
LOC120573877 NA coding downstream 180540 33749667 ~ 33754337 (+)
LOC120575259 NA coding downstream 241544 33810671 ~ 33814588 (+)
G160121 NA non-coding upstream 1207 33564947 ~ 33565263 (+)
G160120 NA non-coding upstream 8247 33558003 ~ 33558223 (+)
G160090 NA non-coding upstream 65040 33484306 ~ 33501430 (+)
LOC120574303 NA non-coding upstream 105420 33458543 ~ 33461050 (+)
G160071 NA non-coding upstream 125708 33440551 ~ 33440762 (+)
G160123 NA non-coding downstream 13476 33582603 ~ 33583281 (+)
LOC120574302 NA non-coding downstream 69502 33638629 ~ 33639114 (+)
G160164 NA non-coding downstream 207812 33776939 ~ 33783583 (+)
G160167 NA non-coding downstream 234189 33803316 ~ 33803848 (+)
G160193 NA non-coding downstream 289167 33858294 ~ 33858593 (+)
LOC120574293 NA other upstream 23309 33463255 ~ 33543161 (+)
LOC120574300 NA other upstream 254865 33307453 ~ 33311605 (+)
G159938 NA other upstream 403659 33162395 ~ 33162811 (+)
LOC120574088 NA other upstream 1100937 32464362 ~ 32465533 (+)
G159833 NA other upstream 1121006 32431749 ~ 32445464 (+)
G160243 NA other downstream 597953 34167080 ~ 34167646 (+)
G160318 LOC104961098 other downstream 613972 34183099 ~ 34183661 (+)
LOC120574901 NA other downstream 1280462 34849589 ~ 34928475 (+)
G160423 mvp other downstream 1392973 34962100 ~ 34966949 (+)
LOC120575316 NA other downstream 1476590 35045717 ~ 35055656 (+)

Expression


Co-expression Network