LOC120574734 (LOC105899973,LOC106607192)


Basic Information

Item Value
gene id LOC120574734
gene name LOC105899973,LOC106607192
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 32606839 ~ 32626681 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825142.1
CATGGGTTTCGTGCGTCTCGTTTAAGACGTATTAATTTTGCGCGTCGCTGTCTGATTACGTCATTGTCTTGTGGAAGCGGTAGTGGTGACTCTGTGCATGCGGTGTTATTTGAGCTACAGTAAAAAAGTTTAGCTTTGCTGGACACCTGGGCAGTTTTCACGTTTATTCCACGCCATGTCATCTCTTCTGAAGGTCGATCGCGAGATGAAAACCAAGGTGGAAGCATTCAGGGAGCAGATCAGCAGTGAGGCTGAGCACCTGGTCGCCAGCTTTTTCCCTCGAAAGCTTCTGGAGTTGGATAACTTTCTAAAGGAGCCTATTCTCAACGTGATTGACCTGAAAGAAATCCATTCAGAGATCAAGTTCAAAGTCCCAGACCCGATTCTTTTCAATAACAGCCATGATGGTGTGGACATGAATACCAAAAAGAGGAAACTAGAAGATGGAGTCACTGTTGAGAGCTGGCAAGGGGGAACCAAAACCCTGGTGATGCCAGAGGGGATGCTGAAATGTAACACCAAGCTGGTAGACCTGATTGAGCGAGTCAAACCAGAGATCAGGACTCTGATTGAGAAGTGTAACACAGTTAAGATGTGGGTCCAGCTGCTCATCCCTAGAATAGAAGATGGAAACAACTTTGGAGTCTCCATACAGgAAGAGACTGTGGCAGAGCTGAGGACGGTGGAGTCAGAGGCCGCATCTTACCTGGACCAGATCTCCAGATACTACATGACAAGAGCCAAGCTTGTCTCCAAAATTGTCAAGTACCCTCACGTGGAGGACTACAGGAGGACCATATCAGAGATTGATGAGAAGGAGTACATCAGTTTGAAAATCATTGTTTCAGAGCTGAGGAATCAATACGTGATTCTTCATGATATGATCCTGAAAAACATTGAGAAGATCAAGAAACCAAGAAACTGCAACTCTGAAGCTCTTTACTGACCtcccctcaacacacacacacacacacacacacacaaaacatgagCTCAGTCAGGCAGTACTGACCAACCAATAATTATAGCTTTTGTTTTGGGAGTACCTGACGATTTTTGCTTTGACAACCTCAGGACAATTATGCCGTATCAAATAAGATGCTGCCTTTGGACTGATAGTGTGCGGATATTCAGTCTTAAAAAGTGCTGCTCTCTATTCTATATTTAAAACCCCAGCTGTTTGGGTCCATAGTGAGCTAGAGGAagctttaaaaatgcatttaaaaagatattgacccaacatcacacacatacattacagCTGTTGTGGGATCCTCCTCCATCTTTGATTTAGGCCCTATTCTGCAGTCACCGCCATGCTTTCTAGCACGTAAACCTTCAGTTTTGGCCATCCAGTACTGATTGGAATGTGACCTTGGATTCTTTTTTCCTCCTGAGTATCTCGACTGCACGCTGTTAATACAAAGACCGCCCACATGGTCTGCCTCCCTCCTGTTCCGCTGGGACTAAAGCTCGGAGGTTACGGCTGGTTTCTCTTCCTGTCTGGGATATCTGGAGTTCTGCTCTTGTGGATGCGGTGTCTCTCCCAGGAATGTTATCatctgttttttattgtttgtttgtttttttgcttcatGTTGCCTGACCCACCTAGAGAAGGTTTTCCTTTAGTTTTTGCCCTGTCTCTGGAACATTCTGGGCACACCACTGTCCTGAGAAAAATATGGAATTTAAaactcaaactccacacagTCCTCCCCCCGGTTGGCCTCAAACTGTCAAGGGACCCTCGTTTAATACAATGCAGACCCCTTTCCTCAGTGCTTCAGAAAACAGCTGCAGTTCTTCAGCTTTAGTGTTGCAATTATCCTGACATCCAGAGATTTGACTGCACATAACTCCGTTTCTCATGGAGGATTCTCACTCTTCACATGAAGAATATTCTTTATTTCTCCCTCTGCCTACAAACTGCTTTTTTCTGTCTTAAGTTGTTCTTGTTGTATCTTTGTGTCATAGTGACActagaagataaaaaaaaatcagtttgcCTGCCTTCCTGTTACAGGGAGGCATAGTGCAGAACATGTGGTGctgttaacacatctgttaaCTCTGTAGCACGCTGCTGTCTGTCAGTAAGGACCGGTCAGAAAGGGTTGGATTCAAAAgtcaaaaaagaaaactacCTGGATGTGTGTTCTTCTACACAACATAATGCACATTCAGTAATGTGACTCCATGTATCTGTCTCTTGCGATCAAGCAGGCTTAAACTGGATCTCGAAACGATTTGTCAAATGCAATTAGTGTCCGTGGTTTCATACAgctgttattattgtttttaacagCCCTGCACAGACATGGtgcacccacacaggtgtttgcACTTAAATGCAATCTGAAATCTTCAATTTTCAGATTTCTTGTGCTGTTATAatgttgttttgtattttgttcacCTCACGATATGAAATTGAAGCCTGGTGCTGTAAAACAAAACTTTTGCAACTTGACAGCACTATGGAAGTGCatccaaaatgtgttttttattttaggttTTTAAGCTAACAAAGTAATAAAGGAACATACCTCtctgtatgcatgcatgcaggtAAGGACTGTTACTTCGTACAAAAATCTAGTTTGAACAAATTCAAACTAACTCATAATACCTTTTGAATAAATTGGAATCCAACCCATgtagcctttttttaaataaaccatGGCTGCAGTCACACCAGATCTCACTCTCCGTTTGTTTCTATGAGGAGGGCGAGGTAAAAAGGTCACTGTTACAATTTGTTGTGCATATTCAAAAACCTGATGATATTCAAGTCTTTCACAATGTTTCAAAGTAGGTGTGTTTCTTCTTCCAATCTGTCCGTTCACACCGGGGATGATTCGGCAGTGTCATCCCGCTCACTGCAGCGATAGTTTCGgcgtctcctctatttcttgTGCGAGACGCGAGCGtatgtgtcaagccaggcaggtaatcacatacaggaagatCACAATGTAGCCGCattctttacaaaaataaaacgcaTAGGTTAGGCTAGGTTCATGGTAgttttggctgtcttgacttctcacagcGAGACACGCAATCAggcacacggagagagagaccgacggatggacggacagagagagtcacacacactcacatataggctacaattaccacAGTTTTCCCCACTCATCCTGTCTTTCTATCAGAGAGAGAGGATTGCTTTGTGACCGGCGCGTGTCATCCGGTGTGAATGGCAAGGCGCACAATCACACGCACGCCAGTGTGTTCCAGCtgttagtgtgcatgtaaatgtactcaCTGTCTagggaaaaacaaagaaaactagAACTTTCTATATACGTATAAATCCACTTGATTTGTGTAAAGCAGGCTGCTAAAGCCTATATTCTATTTCGTGTTGGATTTTGTCCCCTTCATTACATTGGAATCACATCAGGATTTCAAGGAAGGGCTCTTAAAGCCGGTATGGACAGGAGGAACAATTAATGGGCATGTGATTACTGTattaaaaatgtgaacatatATCCTTTCATTTTCTGTTGCGTTCAAACTCTATTTtgaatttcaaataaaaaatgacagcCATAATA

Function

NR:

description
PREDICTED: proteasome activator complex subunit 3-like isoform X2

GO: NA

KEGG:

id description
K06698 PSME3; proteasome activator subunit 3 (PA28 gamma)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825142.1 True 3587 mRNA 0.43 10 32606839 32626681

Neighbor

gene id symbol gene type direction distance location
LOC120574291 LOC103393542,LOC105013241,LOC106600850 coding upstream 180468 32410079 ~ 32426371 (+)
LOC120574894 LOC104927160,LOC101485211,LOC102310132,LOC102784865 coding upstream 297346 32279167 ~ 32309493 (+)
ube2z ube2z coding upstream 349289 32243837 ~ 32257550 (+)
atp5mc1 atp5g1 coding upstream 365371 32234052 ~ 32241468 (+)
eve1 LOC101061481 coding upstream 429214 32129170 ~ 32177625 (+)
LOC120574295 NA coding downstream 412036 33038717 ~ 33052016 (+)
LOC120575298 LOC106591577,LOC106596222,LOC106591186,LOC106574345,LOC106604344,LOC106574346 coding downstream 882426 33509107 ~ 33511123 (+)
LOC120575300 NA coding downstream 939789 33566470 ~ 33569127 (+)
trnap-cgg_4 NA coding downstream 968627 33595308 ~ 33595379 (+)
trnap-agg_18 NA coding downstream 992456 33619137 ~ 33619207 (+)
G159845 NA non-coding upstream 30609 32575484 ~ 32576230 (+)
G159832 NA non-coding upstream 175785 32430747 ~ 32431054 (+)
G159799 NA non-coding upstream 291913 32314680 ~ 32314926 (+)
G159798 NA non-coding upstream 292707 32313900 ~ 32314132 (+)
G159763 NA non-coding upstream 392171 32210182 ~ 32214668 (+)
G159887 NA non-coding downstream 140570 32767251 ~ 32767451 (+)
G159899 NA non-coding downstream 318069 32944750 ~ 32944955 (+)
G159906 LOC102792843 non-coding downstream 372349 32999030 ~ 32999544 (+)
LOC120574301 NA non-coding downstream 543811 33170492 ~ 33171345 (+)
G159969 NA non-coding downstream 723227 33349908 ~ 33350887 (+)
LOC120574088 NA other upstream 141306 32464362 ~ 32465533 (+)
G159833 NA other upstream 161375 32431749 ~ 32445464 (+)
G159484 csnk1d,LOC106596082,LOC106595407,LOC103154369 other upstream 1448398 31152559 ~ 31158441 (+)
mpp2a mpp2,LOC101475212,LOC100701914 other upstream 2123126 30465788 ~ 30483713 (+)
LOC120575288 NA other upstream 2303287 30240310 ~ 30303552 (+)
G159938 NA other downstream 535714 33162395 ~ 33162811 (+)
LOC120574300 NA other downstream 680772 33307453 ~ 33311605 (+)
LOC120574293 NA other downstream 836574 33463255 ~ 33543161 (+)
G160243 NA other downstream 1540399 34167080 ~ 34167646 (+)
G160318 LOC104961098 other downstream 1556418 34183099 ~ 34183661 (+)

Expression


Co-expression Network