LOC120575298 (LOC106591577,LOC106596222,LOC106591186,LOC106574345,LOC106604344,LOC106574346)


Basic Information

Item Value
gene id LOC120575298
gene name LOC106591577,LOC106596222,LOC106591186,LOC106574345,LOC106604344,LOC106574346
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 33509107 ~ 33511123 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826019.1
ATGTGGTCGAGCAGGACGTGTGAGCCTTACATGAGCGTGACAGTTCACTTCATTCAAGACTGGGAGATGAAAACAGCGTGTCTTCAATCAAGTTATTTCCCTCAGGATCACACCGGTGAGCATATATCCGAGGCCCTGCAGGACGCAGCTGCAAGTTGGAAACTCCAAGAAAAGCATCTAGTTGCTATAACAACCGACAACGGGAGCAACATCGTCAAAGCGGTTGAGCTGAACGGGTGGCTGAGGATGCAGTGCTTCGGTCACAGACTACACTTGGCTATCGGACATGGCATGAATGACAAGCGCGTCACCCGGGCCATTTCTCTGTGCAAGAGAATTGTAAGCTGTTTTTCGTACAGCTGGAAGAAAAGGAGACATCTTGCTGAAGTCCAGATTCAGCTGGGTCTGCCAAGTCACCAACTCATAACCGAGTCTGCCACACGCTGGGGATCAAGGCAGCAGATGATAGAGAGAGTCCTGGAGCAGGAAGGAGCGCTGGCTAAAGTCCTGTCTAATGACAAAAAGACCAGGCACCTTGTCCCTACCTGGCAGGACTTAGAGGTCCTAGAAGCAGTCCAAAAGGTCCTGAAACCTCTCCAGGACTTTACCGATGCTTTGTCAGGTGAGGAGTACGTCACTCTATCATATGTGAAACCTGTGCTGCACCTTTTTAACGAAAGTCTCCTGGCATGTGAAGAGGGTGATAGCGAGCTTTGCAAATCGATCAAGACCAGCATTGTTGAGTACCTCAACAGCAAGTATTCTGACCCAACTGCTACTGACCTATTAGAGATGGCTACATTTGTGGATCCACGGTTCAGGGCAACCTACATCCCAAGTGAAAAAGTCGATGCATTGAAGCACAGAGTTGTCTTGGAGGTGGAGACGCTACTGGCTGATCAGAGCAGCTGTCAACCGCCTTACCTACATGTGCCCACTGTGCCTGAGGCTGCAGATGGAGAAGCTGCAGTTGCACCAAAAGCTAAGACACTGGCAAGCTTCTTCAAGCAGCGCACAGCCACCACCACTGCACCAACCATGAGAGGGGCTATTGAAAATGAACTGTCAAGTTACTTGCAGTCAGCAAGTGTGGAGAGTGACACTGATCCCCTCAAGTGGTGGAAGGATCATGAAGTTGTCTTTCCAGCTCTGAGCCATCTGGCAAAAAAGTATCTCTTGGTACCAGCTACCAGTTCACCCTCCGAAAGGGTTTTCAGCTGCAGTGGCAATATCGTGACCTGCCACAGAGCATCTCTGAAGCCGGATGCCGTTGACAGGCTGGTGTTTCTCGCACAAAATCTTTAA

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826019.1 True 1305 mRNA 0.50 2 33509107 33511123

Neighbor

gene id symbol gene type direction distance location
LOC120574295 NA coding upstream 457091 33038717 ~ 33052016 (+)
LOC120574734 LOC105899973,LOC106607192 coding upstream 882426 32606839 ~ 32626681 (+)
LOC120574291 LOC103393542,LOC105013241,LOC106600850 coding upstream 1082736 32410079 ~ 32426371 (+)
LOC120574894 LOC104927160,LOC101485211,LOC102310132,LOC102784865 coding upstream 1199614 32279167 ~ 32309493 (+)
ube2z ube2z coding upstream 1251557 32243837 ~ 32257550 (+)
LOC120575300 NA coding downstream 55347 33566470 ~ 33569127 (+)
trnap-cgg_4 NA coding downstream 84185 33595308 ~ 33595379 (+)
trnap-agg_18 NA coding downstream 108014 33619137 ~ 33619207 (+)
trnap-agg_19 NA coding downstream 122942 33634065 ~ 33634138 (+)
LOC120573877 NA coding downstream 238544 33749667 ~ 33754337 (+)
G160090 NA non-coding upstream 7677 33484306 ~ 33501430 (+)
LOC120574303 NA non-coding upstream 48057 33458543 ~ 33461050 (+)
G160071 NA non-coding upstream 68345 33440551 ~ 33440762 (+)
G160070 NA non-coding upstream 79247 33429637 ~ 33429860 (+)
LOC120574309 NA non-coding upstream 153998 33354196 ~ 33355109 (+)
G160120 NA non-coding downstream 46880 33558003 ~ 33558223 (+)
G160121 NA non-coding downstream 53824 33564947 ~ 33565263 (+)
G160123 NA non-coding downstream 71480 33582603 ~ 33583281 (+)
LOC120574302 NA non-coding downstream 127506 33638629 ~ 33639114 (+)
G160164 NA non-coding downstream 265816 33776939 ~ 33783583 (+)
LOC120574300 NA other upstream 197502 33307453 ~ 33311605 (+)
G159938 NA other upstream 346296 33162395 ~ 33162811 (+)
LOC120574088 NA other upstream 1043574 32464362 ~ 32465533 (+)
G159833 NA other upstream 1063643 32431749 ~ 32445464 (+)
G159484 csnk1d,LOC106596082,LOC106595407,LOC103154369 other upstream 2350666 31152559 ~ 31158441 (+)
G160243 NA other downstream 655957 34167080 ~ 34167646 (+)
G160318 LOC104961098 other downstream 671976 34183099 ~ 34183661 (+)
LOC120574901 NA other downstream 1338466 34849589 ~ 34928475 (+)
G160423 mvp other downstream 1450977 34962100 ~ 34966949 (+)
LOC120575316 NA other downstream 1534594 35045717 ~ 35055656 (+)

Expression


Co-expression Network