usp43b (usp43,LOC103359995,LOC100690273,LOC102787273,LOC102216249)


Basic Information

Item Value
gene id usp43b
gene name usp43,LOC103359995,LOC100690273,LOC102787273,LOC102216249
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3815121 ~ 3952540 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824518.1
CAGCCGCACAATCAGCAGCCTTTCTCCAGGCTAGGCTGGGAGCGATGGGACTGGGAGGGGAACGCTCAGTGCTGCAGCTGCACGGCGGAGCGGCTCGTGTTGTGCCGGGCCATGACGAGACGCTGCCGGTGACAGCGGTCTCGGAGTGATAATGAACGGCTTCAGTAAGTGCTGGGATGGATGAGGAAGGTTTACCGTCCGCGCGCGGTGCAGTAACAGTGGGCTGTTGTGTCTCCGGGCTCCGCGATGGTGTCACCCCTGCGCGCTTTTCCCTTTGCTATCCGGACAGCGGGGCACACTGTCGGAGAAGAGACACACCGGCGTCGGGATTCACACAATCACCAGTCTCCGAATAGACGAGCAagggagtagagagagagagatagagagagggcaCTGCCATGGAGAAACCGACCAGAGTCAAGGAGGAAATGCCGACATCGAAGGAGGAGAAGCGCAAAGAGAAGAAGCCGAAATCTGGGAAGCTTTTCCGAAAGAAATCGTTGAAGTCCGTGGGGAGTTTCGTGAACCGAATCATCAAAACTTTGGGCACTTTGACGCACTTTGGGGACGCTGGCGCGCCGGACGCGGAGGACGACGACGGCGGGTTTCGGATCGGCGCACCTTGCACGCTCAGCGCCGGCTCGGGAGTTGTCAAAAAGGACGTGCTCCATGTGACCTGGGATCGCATGGTGAAGAACAACTCGGGCCCGTCGTCTTCGTCGTCGTCGTACCTGGGCAGAGAGAGGCTCCTTTCCAAACACGCGGAGAAAACCCCCGGCGTCCTGGGGCTGAAGAACCACGGGAACACCTGTTTCATGAACGCCGTGGTGCAGTGTTTGAGCAACACGGACCTGCTCGCGGAGTACCTGGGGCTGGAGCGATACAAGCTGGACCTGGGTCACACCAGGATCAACGGCGTGGTGAAGACCGAGGAGACTCTGCTCGCCAAGGGGGAAGTCACGGAGCAGTTGGCATCACTCGTCCGGGCTCTGTGGACTCTGGAGTACACCCCACAGCTGTCTGTGGACTTCAAGACTATAGTGTCCAAGTATGGCGCACAGTTTCGCGGTAATTCCCAACATGACGCCCTGGAGTTCCTCCTGTGGCTGCTGGACCGCGTCCATGAAGACGTCAATCTGGCCTgccacaataacaacaacaagacCAAAGCTCCCGGAAAGGGTGCCGGTGGAGCTGAGGAGCTGCTGTCTCCTGACCCGTCCCAGTCCCAGCAGCCCAGTGTCCAGCACAGCTTTGTCCAGGAACTTTTCCAGGCACAGTACAAATCTTCCCTGACGTGCCCACACTGCATGAAACAAAGCAACACCTTTGACCCGTTCCTGTGCATCTCGCTCCCCATTCCTCTTCGCCAGACCAGGTTGTTGTGTGTGATTCTGGTGTTCAGCACCAAAGGACAGCGGTACCTGCGGGTCGGGCTGGCTGTGCCTCTGTTTGGCTCCGTGGCCGGTCTGAGAAGGATGGTGGCTGATGAGGGGAAAATATCCCCAGACCAGGTGATCCTGACGGAGGTTTACTCCACAGGGTTCCAGCGCTCCTTCTTTGATGAGGAGGATCTGACCAGCATAGCTGAGAATGACGTCGTCTACGCCTTCCAGGCTCCGCCCCTTTACATCAGAGGAGGCTCAGCGCGGATATCAgGGTACCATCACAGCCTCCCATCCTCTCCGTACTCCACCGGTCCTGAGGGTCAGCGGTTACCTTCATCTGGGACCATGTCATCAGAGTTCCTCAACCAGGGCGTCCCTGCAAAGATTCTGCTGTTGGTGTGCAACGCTGCAGGGACAGGCCAGCAGGCTGTCAGGTTTGGCCCGCCGTTCCTAATGAGGGAGGACCGGTCTATTTCCTGGGACCAGCTGCAGCAGAGCATCCTCAGCAAGCTGTATTACCTGATGATCAATGGGGCCCAGGCACAGAATACCAGAGTGCTGTTCAACATCCGTGTGGTGGGAGGATCAGTGTTCTACAGCTACCTGTCTCCCCAGGACGGGCGGCCGCTCTACCACCCCGCCGTCGACAGAGCTCTGAAGCTCTGCTGCTCAGGAGGACCTCCGCATGTGAAGCTCATCATCGAGTGGGAGCACAGAATCAAAGACTGCCTGTTTGGTAACATTCAGGAGGAGGTGGTGAAGGATGCAGACAGCGTGAggaatcagcagcagcagcacgtcCAGCAGTACAGCTGCACCTTGGACGAGTGCTTCCAGCTCTACACCAAAGAGGAACAGCTTGCCCCAGATGATGCCTGGAAGTGCCCCCACTGTAAGCAGCTGCAGCAGGGCATGGTGAAGATGAGCCTGTGGACGCTGCCGGACATCCTCATCCTGCACCTGAAGCGCTTCAGGCAGGTGGGCGAGCGGCGGAACAAGCTCACCACGTTGGTGCACTTCCCCCTGGCGGGCCTGGACATGACGCCTCACATGGTGAGCCGCAGCCACGGCTCCCATCAGCCCCCTCTGCAGCCTGGCTGGAAACAGCCGCGGCGACCTGACCTGACTCCTCCCGACTTCCTGTACGATCTGTATGCTGTGTGCAACCACCACGGAGGAATGCATGGCGGACATTACACAGCCTTCTGCAGGAACTCGGTGGACGGCCAGTGGTACAGTTATGATGACAGCAGTGCTGAGCCGGTGCCAGAGGCGGATGTGTGCACACGTGGAGCCTACATCCTCTTCTATCAGAGAAGAAACACCATCCCCCTCTGGTCTGCCAGTTCCTCCGTCAACGGTTCCACCAGCTCATCCACCTCTGACCACTGGCTGGTCCGGCTGGGGGGGGGCAGTAAGAGGGGCAGCGTGGTGTCGGGAGGAGCCATCCCTGGACCTCCGGGGCCCACACAGGCCCCAGAGTCTCCTGAGCTGCCAGTGTTTGGAGATGAACCCCCCAAAACAGCTGACACAAATGGGTTTGAAGCCAAGCTGTTTGTCCGTGGGAGCCAGGGCCGGAGTTTAAGCATGAGATCACCAACTAAGCCCAAGGAGACTCTGAGCAAAGTTCTGCCACTGCGCTGGTCTTTTGGCTCCAAGGACCGCATTAGACAACCAGCCCAGACCCAGCCTGGAGAGCTGGTGGAGTACCTGGAGTCTGGGCGCCGCCCGCGATGTACCAAAGAGCCTATCGTAACACTGGTGGCCACCCCGCCACAAATAAATGCCCAGGGAAGAGCCTTCGAAGTGGGACAGGACTGCAGCTCACCCAGCAGTAGCAGTCTTAGTTATACAGACAGACCCAGCTCTGACTCTTGTTACTCCCCCAAATTACCCGAGGGACAGAGCAGAGCGTGCGCGGAGAGAAACACGAGCCAGGGAGTCGGTAACGGCAGCAATTTGAAAGCCAGGGAGGATGGTTCTCTGAGGCACCGGTCGTCTAAGAGAGCGAGGCAGGACCACGGCCGGACCCTGGACCTCCAGCTTCAGCTTCACAGAGGGGCCGTTCTATTGGGTCATATCAGCCACAGTGCACCTCCAAGCAGAGATTCCACACTGAGAAGGACCAAGGTTCAGACAGGATCGACAGCCAGGGCACAAAAAGACTTGTTACAGATGACCACTGTTCAACCGGAGGACAGGAGGGGGCAGAGGGGTCAGGAGGGTTGCAGCCACGACAGCCTCTTGTCTTTTTTCAAACCTGGTTTCATGAAGAAAGACATTGTCGGGTCACCAATCAAAGGGCAAGACCGGCGTATGAACAGCCACGGACAACTGGGAAAGCTGGCAAGCAGTAATTTATCCAAACTGTCCCTCTCCAATGGAACGCTGACCGCGGCGGCACCAGACGAGAGGAGGGCCAACGCCAACGTCCTCCCGAGCCGCGACGCCCATAATAACTGCAAAGTGCCGCTCGTGAACGGAAAAGCCGGGATTCACCACCCTGTAGACATTAAGCGCGCTCACAGCTCCAGTAACATCCAGACGAGGCTGGATTTGACATTTCGCAGGTGTGCGTCGCTGCAGAGGAACGGCGAAGTAGCGGCCCCCCCGGCCCAGCGCCTCCTGCTGTCAGACAAGCCCAGCTACGCCACTCTGCAGCGGACGCAATACAGCACCGCCTCCCTGGtGCCTCTGTGACAGCCCAGAATGACCCCTAGGACCTCTCTGCTGATTCCTACGCTCGGCAACGACAGGAGCTCCCAGCAGGAGGCGTCGCCGGAAACAACAGTTCATCTTCTTCTCGCTCCCCCTTCATAGTACTGTTTCTATAAGTtcttacctgtgtgtgtcttacaAACTAAATCTATGCAGAGTTGAATTTACTGAGGAGAAATACTGCTGTaatgtgatttttctttttcctcgtTTTAATTTTGCAAAAGCAGTCTactgttaattaattaatggttTTATTTTGGAGTTTATGATGAATATTTTGAAAAGCAGAGGGTGAATTTGGTGAatttgcatgtttgtttgttttttagccCATAACACTTTCACAAAACCATCATCTGTCACGTGGGCTAAGACAGGTCACACTGTTAAACACTGCAAAAAGTACTAACGCCTGCACTGTATGTTGGCTGCTTTAAGAAAAAGCATAATTTGCTTTGTCATTTACTTTATCATTTTCATGTTAAATTACTGACGTACtttctgtctttatttatgtctttACATGACCAGAGCTTACATGCTAAGTGACATTGCTAATGGAGGAACAATTACACTgcacctagtctatatccacaatgttccacttccgggattgctccgttgccaccggaaattctgccggaggactccgttaccttcctctttctttgtgttgtaattttaacctctg
>XM_039824519.1
AGTTGATTTTCCGGAGATTTATCGTAGAGGTAAAAGTGGTTGCCATGGACGTGTGTAGCGGGGGCGGCCTGTGCTGCGCCCCTGCAGGCACCCTGAAATCATTTACAGTCTGCATGTGGCGTCTCCTATGAGAGTCAGCATTTCATACACAGAACCTGCCAGCAGAGGGAGCCCTAACACAAGTCTTATGAAGTCGCAGCTGCATACAGAGACTATAGTGTCCAAGTATGGCGCACAGTTTCGCGGTAATTCCCAACATGACGCCCTGGAGTTCCTCCTGTGGCTGCTGGACCGCGTCCATGAAGACGTCAATCTGGCCTgccacaataacaacaacaagacCAAAGCTCCCGGAAAGGGTGCCGGTGGAGCTGAGGAGCTGCTGTCTCCTGACCCGTCCCAGTCCCAGCAGCCCAGTGTCCAGCACAGCTTTGTCCAGGAACTTTTCCAGGCACAGTACAAATCTTCCCTGACGTGCCCACACTGCATGAAACAAAGCAACACCTTTGACCCGTTCCTGTGCATCTCGCTCCCCATTCCTCTTCGCCAGACCAGGTTGTTGTGTGTGATTCTGGTGTTCAGCACCAAAGGACAGCGGTACCTGCGGGTCGGGCTGGCTGTGCCTCTGTTTGGCTCCGTGGCCGGTCTGAGAAGGATGGTGGCTGATGAGGGGAAAATATCCCCAGACCAGGTGATCCTGACGGAGGTTTACTCCACAGGGTTCCAGCGCTCCTTCTTTGATGAGGAGGATCTGACCAGCATAGCTGAGAATGACGTCGTCTACGCCTTCCAGGCTCCGCCCCTTTACATCAGAGGAGGCTCAGCGCGGATATCAgGGTACCATCACAGCCTCCCATCCTCTCCGTACTCCACCGGTCCTGAGGGTCAGCGGTTACCTTCATCTGGGACCATGTCATCAGAGTTCCTCAACCAGGGCGTCCCTGCAAAGATTCTGCTGTTGGTGTGCAACGCTGCAGGGACAGGCCAGCAGGCTGTCAGGTTTGGCCCGCCGTTCCTAATGAGGGAGGACCGGTCTATTTCCTGGGACCAGCTGCAGCAGAGCATCCTCAGCAAGCTGTATTACCTGATGATCAATGGGGCCCAGGCACAGAATACCAGAGTGCTGTTCAACATCCGTGTGGTGGGAGGATCAGTGTTCTACAGCTACCTGTCTCCCCAGGACGGGCGGCCGCTCTACCACCCCGCCGTCGACAGAGCTCTGAAGCTCTGCTGCTCAGGAGGACCTCCGCATGTGAAGCTCATCATCGAGTGGGAGCACAGAATCAAAGACTGCCTGTTTGGTAACATTCAGGAGGAGGTGGTGAAGGATGCAGACAGCGTGAggaatcagcagcagcagcacgtcCAGCAGTACAGCTGCACCTTGGACGAGTGCTTCCAGCTCTACACCAAAGAGGAACAGCTTGCCCCAGATGATGCCTGGAAGTGCCCCCACTGTAAGCAGCTGCAGCAGGGCATGGTGAAGATGAGCCTGTGGACGCTGCCGGACATCCTCATCCTGCACCTGAAGCGCTTCAGGCAGGTGGGCGAGCGGCGGAACAAGCTCACCACGTTGGTGCACTTCCCCCTGGCGGGCCTGGACATGACGCCTCACATGGTGAGCCGCAGCCACGGCTCCCATCAGCCCCCTCTGCAGCCTGGCTGGAAACAGCCGCGGCGACCTGACCTGACTCCTCCCGACTTCCTGTACGATCTGTATGCTGTGTGCAACCACCACGGAGGAATGCATGGCGGACATTACACAGCCTTCTGCAGGAACTCGGTGGACGGCCAGTGGTACAGTTATGATGACAGCAGTGCTGAGCCGGTGCCAGAGGCGGATGTGTGCACACGTGGAGCCTACATCCTCTTCTATCAGAGAAGAAACACCATCCCCCTCTGGTCTGCCAGTTCCTCCGTCAACGGTTCCACCAGCTCATCCACCTCTGACCACTGGCTGGTCCGGCTGGGGGGGGGCAGTAAGAGGGGCAGCGTGGTGTCGGGAGGAGCCATCCCTGGACCTCCGGGGCCCACACAGGCCCCAGAGTCTCCTGAGCTGCCAGTGTTTGGAGATGAACCCCCCAAAACAGCTGACACAAATGGGTTTGAAGCCAAGCTGTTTGTCCGTGGGAGCCAGGGCCGGAGTTTAAGCATGAGATCACCAACTAAGCCCAAGGAGACTCTGAGCAAAGTTCTGCCACTGCGCTGGTCTTTTGGCTCCAAGGACCGCATTAGACAACCAGCCCAGACCCAGCCTGGAGAGCTGGTGGAGTACCTGGAGTCTGGGCGCCGCCCGCGATGTACCAAAGAGCCTATCGTAACACTGGTGGCCACCCCGCCACAAATAAATGCCCAGGGAAGAGCCTTCGAAGTGGGACAGGACTGCAGCTCACCCAGCAGTAGCAGTCTTAGTTATACAGACAGACCCAGCTCTGACTCTTGTTACTCCCCCAAATTACCCGAGGGACAGAGCAGAGCGTGCGCGGAGAGAAACACGAGCCAGGGAGTCGGTAACGGCAGCAATTTGAAAGCCAGGGAGGATGGTTCTCTGAGGCACCGGTCGTCTAAGAGAGCGAGGCAGGACCACGGCCGGACCCTGGACCTCCAGCTTCAGCTTCACAGAGGGGCCGTTCTATTGGGTCATATCAGCCACAGTGCACCTCCAAGCAGAGATTCCACACTGAGAAGGACCAAGGTTCAGACAGGATCGACAGCCAGGGCACAAAAAGACTTGTTACAGATGACCACTGTTCAACCGGAGGACAGGAGGGGGCAGAGGGGTCAGGAGGGTTGCAGCCACGACAGCCTCTTGTCTTTTTTCAAACCTGGTTTCATGAAGAAAGACATTGTCGGGTCACCAATCAAAGGGCAAGACCGGCGTATGAACAGCCACGGACAACTGGGAAAGCTGGCAAGCAGTAATTTATCCAAACTGTCCCTCTCCAATGGAACGCTGACCGCGGCGGCACCAGACGAGAGGAGGGCCAACGCCAACGTCCTCCCGAGCCGCGACGCCCATAATAACTGCAAAGTGCCGCTCGTGAACGGAAAAGCCGGGATTCACCACCCTGTAGACATTAAGCGCGCTCACAGCTCCAGTAACATCCAGACGAGGCTGGATTTGACATTTCGCAGGTGTGCGTCGCTGCAGAGGAACGGCGAAGTAGCGGCCCCCCCGGCCCAGCGCCTCCTGCTGTCAGACAAGCCCAGCTACGCCACTCTGCAGCGGACGCAATACAGCACCGCCTCCCTGGtGCCTCTGTGACAGCCCAGAATGACCCCTAGGACCTCTCTGCTGATTCCTACGCTCGGCAACGACAGGAGCTCCCAGCAGGAGGCGTCGCCGGAAACAACAGTTCATCTTCTTCTCGCTCCCCCTTCATAGTACTGTTTCTATAAGTtcttacctgtgtgtgtcttacaAACTAAATCTATGCAGAGTTGAATTTACTGAGGAGAAATACTGCTGTaatgtgatttttctttttcctcgtTTTAATTTTGCAAAAGCAGTCTactgttaattaattaatggttTTATTTTGGAGTTTATGATGAATATTTTGAAAAGCAGAGGGTGAATTTGGTGAatttgcatgtttgtttgttttttagccCATAACACTTTCACAAAACCATCATCTGTCACGTGGGCTAAGACAGGTCACACTGTTAAACACTGCAAAAAGTACTAACGCCTGCACTGTATGTTGGCTGCTTTAAGAAAAAGCATAATTTGCTTTGTCATTTACTTTATCATTTTCATGTTAAATTACTGACGTACtttctgtctttatttatgtctttACATGACCAGAGCTTACATGCTAAGTGACATTGCTAATGGAGGAACAATTACACTgcacctagtctatatccacaatgttccacttccgggattgctccgttgccaccggaaattctgccggaggactccgttaccttcctctttctttgtgttgtaattttaacctct

Function

symbol description
usp43 Predicted to enable ISG15-specific protease activity. Predicted to be involved in translesion synthesis. Predicted to be located in nucleoplasm.

NR:

description
ubiquitin carboxyl-terminal hydrolase 43-like

GO: NA

KEGG:

id description
K11856 USP43; ubiquitin carboxyl-terminal hydrolase 43

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824518.1 True 4803 mRNA 0.56 16 3826183 3952540
XM_039824519.1 False 3976 mRNA 0.55 17 3815121 3952539

Neighbor

gene id symbol gene type direction distance location
ntn1b LOC103359994,LOC102307962,LOC102192413 coding upstream 48060 3716564 ~ 3767061 (+)
hmox1a hmox1 coding upstream 240398 3566313 ~ 3574723 (+)
foxd7 LOC103364958,LOC101472204,LOC102208133,LOC100712378,LOC102300378 coding upstream 344106 3469465 ~ 3471015 (+)
spc24 NA coding upstream 419428 3385439 ~ 3395693 (+)
LOC120575510 NA coding upstream 432508 3382514 ~ 3382613 (+)
grb2b grb2,LOC106523871,LOC105013161 coding downstream 22019 3974559 ~ 4017811 (+)
LOC120574218 LOC101468431,LOC102214893,LOC102305576,LOC103359999 coding downstream 84251 4036791 ~ 4074967 (+)
kpna2 LOC104929438,LOC103360000,LOC102305279,LOC101468128,LOC102788352,LOC102214620 coding downstream 123314 4075854 ~ 4081644 (+)
smurf2 LOC102788644,LOC100691078,LOC101469682,LOC103360001 coding downstream 130789 4083329 ~ 4158337 (+)
ddx5 LOC103360002,LOC100712452,LOC102214151 coding downstream 207061 4159601 ~ 4165471 (+)
LOC120573845 NA non-coding upstream 144867 3667892 ~ 3670254 (+)
G151465 tom1 non-coding upstream 187572 3625664 ~ 3627549 (+)
G151430 NA non-coding upstream 277206 3534920 ~ 3537915 (+)
G151414 NA non-coding upstream 380741 3434095 ~ 3434380 (+)
G151411 NA non-coding upstream 384473 3430358 ~ 3430648 (+)
G151480 NA non-coding downstream 350 3952890 ~ 3953432 (+)
LOC120574263 NA non-coding downstream 1004 3953544 ~ 3955141 (+)
G151650 NA non-coding downstream 215650 4168190 ~ 4168505 (+)
G151662 NA non-coding downstream 260460 4213000 ~ 4214435 (+)
G151665 NA non-coding downstream 262507 4215047 ~ 4215303 (+)
G151471 NA other upstream 151839 3658997 ~ 3663282 (+)
ldlra ldlr other upstream 457926 3331004 ~ 3357195 (+)
LOC120573829 NA other upstream 537517 3243610 ~ 3277604 (+)
G151315 NA other upstream 667144 3146504 ~ 3147977 (+)
junbb LOC103364966,LOC107087652,LOC104932219,LOC100707881,LOC105929935 other upstream 710529 3083898 ~ 3104592 (+)
G151695 wbp11,LOC102783903 other downstream 365633 4318173 ~ 4319498 (+)
LOC120574173 NA other downstream 385541 4338081 ~ 4346405 (+)
pde6hb LOC104937730 other downstream 447490 4400030 ~ 4469278 (+)
fmc1 fmc1,LOC102794917 other downstream 810433 4762973 ~ 4765557 (+)
fam234b fam234b,LOC104962864 other downstream 853534 4806074 ~ 4822114 (+)

Expression


Co-expression Network