LOC120574882


Basic Information

Item Value
gene id LOC120574882
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8063001 ~ 8066280 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641917.1
GCAATTAGTTTTAAGAACTACAATTATTAGACAACTCAACTTAATATTTTTGGAGACTTTACTAAACAACTTAAAAGAACGAGTAAGTGGGTAGGACGTGACGTCATTTCCTAACGGTTCTGGCTCAGAGAGCCGACACCAGGGATGTGGCATGGCGGGCTCAGCTACTCCACGGTCTTACTGGACTCCACCGACAATACCTCAAatggaaaacagcagaaaaagaaaatatgagAGAAACTGGAGCGACAGGAAGgcgtgtgtgagaaagaggggAGGACACCAGCGAAGGACAGCAGGCCATATTTGAACTTAGGTCACAGCGTAAAGGACTGAGCCTCACAGGACACGATCCACTAGCTATCGAGGCTCCCTAGCTTTTATTCCTCTTTAAGgtcaacGCAGAGTTTCAACAAATCACCACCATAAATCTTGAGGCAAAATTCATGTCAATTTTGGACCTTCATTCCCCTAAACTCCTTTCCAGAGAGAAACATCGTGCAGAAATGAATATTTCCTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641917.1 True 523 lncRNA 0.44 4 8063001 8066280

Neighbor

gene id symbol gene type direction distance location
epn2 epn2 coding downstream 98605 7933459 ~ 7964396 (-)
LOC120574112 LOC107088099,LOC106951959,LOC103151816,LOC106516530 coding downstream 194119 7739579 ~ 7868882 (-)
nubp1 nubp1 coding downstream 740913 7305634 ~ 7322088 (-)
ciita NA coding downstream 760567 7277866 ~ 7302434 (-)
clec16a clec16a,LOC100711144 coding downstream 792210 7214348 ~ 7270791 (-)
LOC120574884 fbf1 coding upstream 7225 8073505 ~ 8085943 (-)
rasd4 LOC100700404,LOC101481289,LOC104966932,LOC102192661,LOC102311216,LOC102790915 coding upstream 48694 8114974 ~ 8115999 (-)
LOC120573855 NA coding upstream 71304 8137584 ~ 8141833 (-)
nptx1l LOC103375324,LOC104929529,LOC100699861 coding upstream 231458 8297738 ~ 8302271 (-)
cdr2l LOC100699057 coding upstream 408200 8474480 ~ 8484692 (-)
G152756 NA non-coding downstream 584387 7478319 ~ 7478614 (-)
G152748 NA non-coding downstream 693148 7367794 ~ 7369853 (-)
G152738 NA non-coding downstream 706163 7330810 ~ 7356838 (-)
G152729 socs1,LOC100174889 non-coding downstream 856907 7204314 ~ 7206094 (-)
G152730 NA non-coding downstream 862089 7200687 ~ 7200912 (-)
G152863 NA non-coding upstream 21646 8087926 ~ 8092269 (-)
G152924 NA non-coding upstream 225620 8291900 ~ 8292215 (-)
G152925 NA non-coding upstream 226758 8293038 ~ 8293257 (-)
G153106 NA non-coding upstream 383742 8450022 ~ 8454668 (-)
G153111 arhgdia,LOC100706235,LOC107087451 non-coding upstream 396899 8463179 ~ 8558912 (-)
grin2aa grin2a,LOC102780805 other downstream 339087 7569718 ~ 7723914 (-)
arhgdig NA other downstream 1261465 6772880 ~ 6801536 (-)
G152567 NA other downstream 1342358 6719784 ~ 6720643 (-)
G152441 LOC104944083,LOC103371237,LOC107087166,LOC105933549,LOC100701083,LOC101478422 other downstream 1834887 6182408 ~ 6228114 (-)
LOC120574101 NA other downstream 2067812 5991937 ~ 5995189 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other upstream 15858 8082138 ~ 8100398 (-)
G152952 NA other upstream 374899 8441179 ~ 8444381 (-)
G153172 mrps34,LOC102799846 other upstream 665117 8731397 ~ 8733019 (-)
natd1 natd1 other upstream 746050 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 784163 8850443 ~ 8857571 (-)

Expression


Co-expression Network