LOC120574101


Basic Information

Item Value
gene id LOC120574101
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5991937 ~ 5995189 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206416
GAAAGCCCTCGGGTACTGTCCCTGTCGCTGCCTCAGCGTGTTGATCCTGGACCAGCCTTTCTGTGCAGCTATCACAGCCTGGGCTGCTGTCTTCGCACCAACATATTTCCAGGTGCTCCTTTAACATGGAAATCCCTCTCCAGGGACTCTTACATCAGCCACCCTCCGACTGCCTGGCCTCCAGACCCCCACCTCTGGTACGGCCACAAGACCGATGAAATGGTCCAGTGGACAGAGAGAAACATCGTGAACCAGAAGCTCGACAAGTCACTGacggaaatgaaaaaaaaaagcaccgcATAATTAAGCCCTGCTTACCAACCCGGAGACCAC
>XM_039824183.1
AGGTGAAACCTGATCTTGGGTGTCTTGCGTGACATTCTTGAGAAATTTAACACCTTTTCGTTTGACTCGCCTCTCCCACGGTGTGTTATCTCAGTATGACCTCAATTGGCCAAAAAGGTACAAAACCAGCAAAGACAGAGGTGAGGGCAGTAGAAAGCCCTCGGGTACTGTCCCTGTCGCTGCCTCAGCGTGTTGATCCTGGACCAGCCTTTCTGTGCAGCTATCACAGCCTGGGCTGCTGTCTTCGCACCAACATATTTCCAGGTGCTCCTTTAACATGGAAATCCCTCTCCAGGGACTCTTACATCAGCCACCCTCCGACTGCCTGGCCTCCAGACCCCCACCTCTGGTACGGCCACAAGACCGATGAAATGGTCCAGTGGACAGAGAGAAACATCGTGAACCAGAAGCTCGACAAGTCACTGacggaaatgaaaaaaaaaagcaccgcATAATTAAGCCCTGCTTACCAACCCGGAGACCACAACACACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206416 False 333 lncRNA 0.54 3 5991945 5994924
XM_039824183.1 True 493 mRNA 0.51 4 5991937 5995189

Neighbor

gene id symbol gene type direction distance location
il2rb NA coding downstream 5030 5976548 ~ 5986907 (-)
c1qtnf6a LOC101473735,LOC102300081,LOC102790480,LOC100705049 coding downstream 24754 5959192 ~ 5967183 (-)
ap5z1 ap5z1 coding downstream 74981 5904938 ~ 5916956 (-)
wipi2 wipi2 coding downstream 110271 5874742 ~ 5881666 (-)
smurf1 smurf1,LOC102787679,LOC103393300 coding downstream 151291 5821626 ~ 5840646 (-)
LOC120574102 LOC103393291,LOC103147375,LOC102224681,LOC107672151,LOC105890774,LOC105029658,LOC101072687,LOC107583318 coding upstream 663 5995852 ~ 6004000 (-)
mpst NA coding upstream 11337 6006526 ~ 6008599 (-)
napsa ctsd,LOC107376365,LOC101168958 coding upstream 49009 6044198 ~ 6053777 (-)
si:dkey-110g7.8 LOC104967832,LOC102792586,LOC103358544,LOC102210840,LOC101475971,LOC105416417 coding upstream 78353 6073542 ~ 6081964 (-)
csf2rb NA coding upstream 160110 6155299 ~ 6169024 (-)
G152330 NA non-coding downstream 42442 5949277 ~ 5949495 (-)
G152329 NA non-coding downstream 42918 5948814 ~ 5949019 (-)
G152302 NA non-coding downstream 117629 5873777 ~ 5874308 (-)
G152298 NA non-coding downstream 199762 5791967 ~ 5792175 (-)
G152280 NA non-coding downstream 208576 5737931 ~ 5783361 (-)
G152362 NA non-coding upstream 14058 6009247 ~ 6010851 (-)
G152400 NA non-coding upstream 114550 6109739 ~ 6109942 (-)
G152403 NA non-coding upstream 116543 6111732 ~ 6111935 (-)
G152406 NA non-coding upstream 125259 6120448 ~ 6120667 (-)
G152414 NA non-coding upstream 151636 6146825 ~ 6148812 (-)
atp5mf atp5j2,LOC102786280 other downstream 378215 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other downstream 409073 5580263 ~ 5582864 (-)
top3a top3a,LOC102783137 other downstream 424398 5549291 ~ 5567539 (-)
G152114 rbx1 other downstream 527519 5461846 ~ 5464418 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other downstream 764696 5178316 ~ 5227241 (-)
G152441 LOC104944083,LOC103371237,LOC107087166,LOC105933549,LOC100701083,LOC101478422 other upstream 187219 6182408 ~ 6228114 (-)
G152567 NA other upstream 724595 6719784 ~ 6720643 (-)
arhgdig NA other upstream 777691 6772880 ~ 6801536 (-)
grin2aa grin2a,LOC102780805 other upstream 1574529 7569718 ~ 7723914 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other upstream 2086949 8082138 ~ 8100398 (-)

Expression


Co-expression Network