si:ch73-261i21.5


Basic Information

Item Value
gene id si:ch73-261i21.5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 34313035 ~ 34326998 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776749.1
ATGCCTGCATCGGACACTCAACATTCAGAAGTCCAGTTGATTCTGGTCTCATCCTTGCTCTCTTCAGTTAAATCAGACATCGAGGTCCTCTGTGGCTCTCAGACAGTGCACCTCAAGATCCTCCTGTGTCCCGTCTATTTCAATGGATACAACGAATCACTGCTGGCCCTCAACTCACAGCACTCCAAAGACCAGTGTAAAGGGACACCTGACTGGATAGCAGACCCACCTGTTGTCAAATTCAACTTCTCCATCACAGAGGAGGCGATCACTTTCTGCTCCAGCCGGCTGACCATCACTGAGGAGGTGGGAACTGGACTGTTTGCAGACTTCTCCAACGTCCAGCACATCAGCATCGCAGGGATGATCTGTTCTGAGGACCCCAGCAAAGAAGCGATCACCTACCACCAAGAGGTGATGTACAGGTTCTCCTGCCGCTATCCACTGCAGTACCTGCTCAACAACACTCAGATGAGCGCGTCTGGGGTCAGCCTGGCAGTCAAAGACAATAATGGGAGTTTCATCAGCTCACTGAGCATGCGACTCTACTCGGACCATGGCTACTCCTCCATACTGCAGATCCCTCCAGGAGGCCTGGATCTAAAGACCAGGATCTATGTAGAAGTCAAGGCATCCAACCTCACTAACAGATTCAACGTGTTCCTGGACCGATGTTACGCCACTACCTCGCTTTTCCACGTCACCACCACATATTACGATCTCTTTGTTGGGTGTAACCGGGATGCCCAGACAATAATGGGAGTCAACGGAGCGCAGCAGATAGCCCGCTTCTCCTTCGAGGCTTTCCGCTTTGTCCAAAGCAAAGATGTAACTCTCTCCACCTACTATGTTAACTGTGTCACCAGGCTCTGTGTGAACTCTTTCTGCCCCAAACTCATTCAGAACTGCACTACCGGCACCAACACGAGGAGGCGCCGCAGTGGCAACCAGGGCACCACAGTGAGCGACATGGCCACCATCAGCTCAGGCCCCATCACTATCCGCGCAGATATCGGGTATCTGGTGGCATCTGGAGGTGCTCAGCAGACTCATTTGAACAGTACCATGCTGGCTGTTTCAGTCGTAGCAGGCATTGTTGGAGTCATCTGTCTAACTCTGGTGGCTTTCATTGTTTACCAGAGGTACAGCTCCAATATCAGTTCCACCAAGAAGATTCCGTACACACAAAAGTGACAGACTTTGGgctttacatgcacaaaaaaagatgtataacacaataaaggaaagggaaaaagccccaaaaacataatatgaacactttaaagtGAAGTAGCCTAATTAAGACAACAAGTGATTATGCTCCGCAGAcaatatataaaacaatgtatactgtataaatgTTTGCAAAATAGCAATGAAACAATAGATGGAGGAGCAtattattttacaacaactcACATTATCAACCACGGTGCTGACTATAGACACGGGACAGACAGTCATCGTGTGAGTCCAATTTTTCTCTCACCTCTACTTGTAGAGGAAAGACATTCTCCTATCCTTCATTGTAGCAAAACGCTCAGTGACTCTGTCATATAGCTCTCCACGGGACTTCAGGTCTTGTGTTACAGTGGCTTCCATTGATATCTTCGCCAAGCTTCATTCAGagcc

Function

NR:

description
PREDICTED: zona pellucida-like domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776749.1 True 1632 mRNA 0.48 10 34313035 34326998

Neighbor

gene id symbol gene type direction distance location
LOC120544501 zgc:194989,hist2h2l,LOC107719244,LOC107667924,LOC107574861,LOC108277172 coding upstream 3381 34308897 ~ 34309654 (+)
bsx bsx coding upstream 82258 34228620 ~ 34230777 (+)
lim2.1 LOC103356037,LOC104955000,LOC104935109 coding upstream 87930 34220563 ~ 34225105 (+)
opcml LOC103394960,LOC103366991,LOC104930635,LOC102299579,LOC100703901,LOC101464466 coding upstream 809783 33111593 ~ 33503252 (+)
LOC120544785 NA coding upstream 960706 33352264 ~ 33352329 (+)
zpld1a zpld1,LOC103372413 coding downstream 468993 34795991 ~ 34823406 (+)
alcama NA coding downstream 509232 34836230 ~ 34917369 (+)
LOC120543611 NA coding downstream 725444 35052442 ~ 35073453 (+)
LOC120543612 NA coding downstream 746814 35073812 ~ 35078788 (+)
LOC120543613 NA coding downstream 756124 35083122 ~ 35083826 (+)
G170729 zgc:101846,LOC106525086,LOC108416226,LOC105921220,LOC101161532 non-coding upstream 4266 34307928 ~ 34308769 (+)
G170717 hspa8,LOC105921217,LOC102234316,LOC107386347,LOC108249515,LOC106535866,LOC103356016 non-coding upstream 30445 34278144 ~ 34282590 (+)
G170719 LOC104954996 non-coding upstream 72965 34238146 ~ 34240070 (+)
G170716 NA non-coding upstream 76036 34233179 ~ 34236999 (+)
G170643 NA non-coding upstream 578026 33627289 ~ 33735009 (+)
G170762 NA non-coding downstream 49636 34376634 ~ 34384498 (+)
G170771 LOC104947095,LOC103395064 non-coding downstream 91083 34418081 ~ 34434246 (+)
G170849 NA non-coding downstream 442266 34769264 ~ 34769485 (+)
G170851 NA non-coding downstream 448333 34775331 ~ 34775777 (+)
G170852 NA non-coding downstream 455952 34782950 ~ 34783189 (+)
pknox2 pknox2 other upstream 1308696 32887581 ~ 33004339 (+)
robo3 LOC103364814 other upstream 1497492 32712598 ~ 32815543 (+)
cfap58 cfap58,LOC102788841 other upstream 1889006 32401922 ~ 32424029 (+)
igsf9bb LOC103357894,LOC103394972 other upstream 1918505 32246928 ~ 32394530 (+)
G170409 NA other upstream 2248305 32064167 ~ 32064730 (+)
G170735 hyou1 other downstream 5416 34332414 ~ 34336348 (+)
G170775 dlg2 other downstream 109962 34436960 ~ 34442150 (+)
G170896 NA other downstream 712944 35039942 ~ 35040371 (+)
LOC120575607 NA other downstream 756891 35083889 ~ 35087897 (+)
LOC120575668 NA other downstream 995262 35322260 ~ 35324252 (+)

Expression


Co-expression Network