LOC120543613


Basic Information

Item Value
gene id LOC120543613
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 35083122 ~ 35083826 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776754.1
ATGATGaacaaagagaaactggatTTGGAGCTGATGAGGTCTGACATTCTGAAACAAAGTGACATATTAGAACAAGTGATACAAGatatagaagaagaaaaagacaaactgGAAATCACAAAGACTGAGCTACAAAAGCAGAAAGAACATGCAGACAGTCAGTTTGATGAGATCAACAGACAGAAAACCAACATTAAAGATCTGACCCTTCAGcttcagacagaaagagacaaacttGACAATGTCGCAAACAGGATTACCgtaaaacaagaacaacaacaactcaaGGAAGAAGAGttcaaaagacaaacacaagaACTGGAAACCAGTAAGAACAGTTTACTGGTAGAAAGAGAAGAACTGGAACTTTTGAGGAAGGATCTCAACAGGAAGAAAGAAGAGGTTGAAGCTGCCCCGATCACCATTAGTGGAGAGAGGGAACAACTCAATGAGATGAAGATTAGTACTGACAATGACAGACGAATGCTCgagaaagaaaaggacagaATGGAAGGAGAAAGGTCTGAGGTGAAAATGAGAGAAGCTCAACTCTTGAATGAATTGAAATCCCTAGAATATCTGAGGGAAAAGCTGCAACAGCTGGATGAAAGGATGAGTGAAGAcgtgaaaaacaaaatcatgaGACTGGAGCAAAACAATGAAGACTTATTAAAACTGTTGAGTGTTTTGGGGCAAAAGCATTAG

Function

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776754.1 True 705 mRNA 0.39 1 35083122 35083826

Neighbor

gene id symbol gene type direction distance location
LOC120543612 NA coding upstream 4334 35073812 ~ 35078788 (+)
LOC120543611 NA coding upstream 9669 35052442 ~ 35073453 (+)
alcama NA coding upstream 165753 34836230 ~ 34917369 (+)
zpld1a zpld1,LOC103372413 coding upstream 259716 34795991 ~ 34823406 (+)
si:ch73-261i21.5 NA coding upstream 756124 34313035 ~ 34326998 (+)
LOC120575608 NA coding downstream 4309 35088135 ~ 35091948 (+)
zgc:171929 LOC103356043,LOC102794650,LOC102293081,LOC106510912,LOC107386354 coding downstream 207489 35291315 ~ 35300507 (+)
amot LOC103356029,LOC101478708,LOC102211599 coding downstream 270463 35354289 ~ 35494261 (+)
LOC120543615 NA coding downstream 520037 35603863 ~ 35610586 (+)
trnaw-cca_19 NA coding downstream 535973 35619799 ~ 35619870 (+)
G170866 LOC104955308 non-coding upstream 156868 34921306 ~ 34926254 (+)
G170865 NA non-coding upstream 164024 34917893 ~ 34919098 (+)
G170852 NA non-coding upstream 299933 34782950 ~ 34783189 (+)
G170851 NA non-coding upstream 307345 34775331 ~ 34775777 (+)
G170849 NA non-coding upstream 313637 34769264 ~ 34769485 (+)
G170911 NA non-coding downstream 13652 35097478 ~ 35098788 (+)
G170914 NA non-coding downstream 17070 35100896 ~ 35101325 (+)
G170925 NA non-coding downstream 49375 35133201 ~ 35133493 (+)
G170929 NA non-coding downstream 53412 35137238 ~ 35137810 (+)
G170930 NA non-coding downstream 54723 35138549 ~ 35140429 (+)
G170896 NA other upstream 42751 35039942 ~ 35040371 (+)
G170775 dlg2 other upstream 640972 34436960 ~ 34442150 (+)
G170735 hyou1 other upstream 746774 34332414 ~ 34336348 (+)
pknox2 pknox2 other upstream 2078783 32887581 ~ 33004339 (+)
robo3 LOC103364814 other upstream 2267579 32712598 ~ 32815543 (+)
LOC120575607 NA other downstream 63 35083889 ~ 35087897 (+)
LOC120575668 NA other downstream 238434 35322260 ~ 35324252 (+)
G171409 NA other downstream 2178090 37261916 ~ 37262336 (+)
G171468 NA other downstream 2459774 37543600 ~ 37669599 (+)
G171483 NA other downstream 2522204 37606030 ~ 37616661 (+)

Expression


Co-expression Network