LOC120543615


Basic Information

Item Value
gene id LOC120543615
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 35603863 ~ 35610586 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776755.1
TAACTGTTACCTTGTAATTAGAACTGATTAGCACCATGTCGGAGCAGCCAGAGGCCGAAGGAGTTTTTAATCGTCTTTTTAATGCTGCAGCCCGTGCAAGACAGGAGCTGGCAGCGAGAAATAATGAGTCAACGTTACTTTCCACAACAAGACGACTATTTCGCCGGCAAGTTCATCGAGTTCGGGGAGGATCTGGTGGACGCAGGGAAAGCCCTATTTGGCAAGCAAAACTTTTCCTCCTTCCAGGGCCAGATAATGGTTTTCTACCTCCCACAAAAGAACTTGAGGAACTGGCTAAACTTGGATTAGGAAAACCTGTGCATGAGTCAACAGAGGCCGGACGCACAAACTCAAAGATTGGGTTAAACTGGAGTTTATCTGAATTGAACAACTTTGTTTGCCAAAGCTACCCTCGCGTCAGTTTAAATTTGGTAGGCTTTGAATTGGCAAGGACAGGCAAAGGACGCAAGATCCAGAAATTACAAGTTAGTTCTGTGAAGGAATTAAAAGCAGTTGTTGGCAAAAGCAGACTTTACATCGTGCCACAAGCCACTGTCTTGCAGGTAACATCACCACCCTCTGCCATGTCCCAGAATTCATTCCCACCACTCGCAGCTCCACCAGTAGATGAGACCTCACCTCAAGTGGTTTCAGATCAGGTGGCATCCACATCCTCTGCCATATCCATTAATTCATTCCCATCGCTCTCAATTGCTCTAGTACAAGATGAGACTGTGGCTGAGAGTACCCAAGCTCAAAGTGTGGTTGCAAATCAGGCTCTTCAAGAATGGCGAGCAATACGTGCTCAGCAAGACCAGGAGTATAATACAAGTTTGTTGGTGGATCAGGAGAAGGAGAGGAAGAAACTAGCCTATCAGGCCTGTGAGGAAAGACGTCAAAAGGCTATTGAGGGAAGACGTCAGCGACTGTCTGCATGTGAGGAACCCTCAGATGGGGCCTTGATCAAATTTAAATATCCAAATGGACACATCAATGGGAGGAAATTCAGCTTGTCAGAGCCAATCCAGATCTTGTTTGACTTTGTGGGACAAGATGATATTGCCAGTGAAATCTTTGTAGTGCAAGAAGCCACATCCTCAAGATCAATTGAGAGCAGTTCATCCGGGTCAATAATGGATCATGGCATTAAAGCATCCTCAACTCTATATGTACTTTGGTATTCAAATCAGGATGTACAAGAAATTCTCTCGGATCAACAAATTGATGGAGCTCATGCCCTAGACGATACATCTCGTGGTCACTCATTGCTGGctgagacctcctcccagccaAGTCTCTCTGTGCCCTCTCTCCAGCCACTGCTGTGTGAGACTACCCAGCCAAGTCTCTCTGTGCCCTCTCTCCAGCCACTGCTGTGTGAGACCACCCAGCCAAGTCTCTCTGTGCCCTCTCTCCAGCCACTGCTGTGTGAGACCTCCACCCAGCCAAGTCTCTCTGTGCCCTCTCTCCAGCCACTTCTGTGTGAGACCTCCACCCGCTCACTGCTGTCTGAGCCCTCCTCCCAGCCACCACTCACTCTGTTCTCACAACCACAAGAAATCCTGACTCTTCATGATGAACCATCACTCCCTCCATCTGCCCAGGAACCAATCATTATTCTTGATGAACAAGATGAGACAGTTACACAAAATCAGTCTCATGTATCAACACATCACCTAAGAGGACCTGTGGATGAGATTGATCTACAAACCATATTGAAAAAAATGGTCAGCAAAGTTGACGGAAGCTTCTGTCCAACAAGCAACCAAATAAATGTGTGCAGGGATAATGTTTTACTGTGTAGCCTGCGGGCGTTCAAGCGTAGGTTCTTCAACCCTGAAGCAAAATTGGATGTTGTGTTTGTGGATGAAGATGACAATGGTGAAGGGGCAGTTGACGAAGGCGGCCCGACAAGAGAGTACCTAAGGCTGTTAATGAGGGCTGTCCACCAGTCCAATATCTTTGAGGGCCATGAGAAAGACCGGCAGTTGTCTCTTGATACTCAAGCTTTGCAGACTAAACTTTACACATGGGTGGCAAAAATGATTGCTGTGTGTGTCGTCCATGGAGGAGTCGGTCCACACTTCTTTTCCGAAAGGCTTTTCCATCAAATCTGTGGGATACCAACACCCCCCGCCACAGTGGATGAAGTTGGTGACCATACTTTCAGGGAACAGTTAATAAAAATACAGGAAGCAATAACAGTCCAAGAGGCGAACACTGCAATTGCAGAGGCAGCAGATAGTCTCAGCATTATAGGTTCCTTAAGACATGTTTCCAGCCTGAAGGAGAAGGACTCTCTTGTACAGTCAGCTGCAGACTTCTTCCAAAGGAGAATGCAGTCCAGTCACCCTGGAGAAGGTATTGGGAGTTTACAACTGGAGCCTCAACAGTGCCTCCGCTGGGATTTCCACACCGTCCACAAATTCAGTTCCTTCATGAGGGCAACAGAATCTTCCCAGAAGCAAATACTTCTGCTCTTCTACTCCGCCTGCCGCTGCACTCTGCCTATGAAGCCTTCAAACAATACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776755.1 True 2534 mRNA 0.47 14 35603863 35610586

Neighbor

gene id symbol gene type direction distance location
amot LOC103356029,LOC101478708,LOC102211599 coding upstream 109602 35354289 ~ 35494261 (+)
zgc:171929 LOC103356043,LOC102794650,LOC102293081,LOC106510912,LOC107386354 coding upstream 303356 35291315 ~ 35300507 (+)
LOC120575608 NA coding upstream 511915 35088135 ~ 35091948 (+)
LOC120543613 NA coding upstream 520037 35083122 ~ 35083826 (+)
LOC120543612 NA coding upstream 525075 35073812 ~ 35078788 (+)
trnaw-cca_19 NA coding downstream 9213 35619799 ~ 35619870 (+)
trnaw-cca_20 NA coding downstream 10168 35620754 ~ 35620825 (+)
trnaw-cca_21 NA coding downstream 11117 35621703 ~ 35621774 (+)
trnaw-cca_22 NA coding downstream 13009 35623595 ~ 35623666 (+)
trnaw-cca_23 NA coding downstream 13955 35624541 ~ 35624612 (+)
LOC120575670 NA non-coding upstream 44597 35558376 ~ 35559266 (+)
LOC120575663 NA non-coding upstream 69802 35529788 ~ 35534061 (+)
G171049 NA non-coding upstream 101387 35494684 ~ 35502476 (+)
G171011 NA non-coding upstream 261252 35342407 ~ 35342611 (+)
LOC120575657 NA non-coding upstream 274916 35320610 ~ 35328947 (+)
G171088 NA non-coding downstream 312 35610898 ~ 35611180 (+)
G171121 NA non-coding downstream 110550 35721136 ~ 35721344 (+)
G171171 NA non-coding downstream 362662 35973248 ~ 35976436 (+)
G171174 NA non-coding downstream 377058 35987644 ~ 35990193 (+)
G171177 NA non-coding downstream 398847 36009433 ~ 36011192 (+)
LOC120575668 NA other upstream 279611 35322260 ~ 35324252 (+)
LOC120575607 NA other upstream 515966 35083889 ~ 35087897 (+)
G170896 NA other upstream 563492 35039942 ~ 35040371 (+)
G170775 dlg2 other upstream 1161713 34436960 ~ 34442150 (+)
G170735 hyou1 other upstream 1267515 34332414 ~ 34336348 (+)
G171409 NA other downstream 1651330 37261916 ~ 37262336 (+)
G171468 NA other downstream 1933014 37543600 ~ 37669599 (+)
G171483 NA other downstream 1995444 37606030 ~ 37616661 (+)
G171572 NA other downstream 2094097 37704683 ~ 37707766 (+)

Expression


Co-expression Network